RNA–Protein interactions for RNA: ENST00000428136.1

LRCH3-204, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 3,205 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-204ENST00000428136 ITGA6P23229 1130 aa9.11□□□□□ -0.95
LRCH3-204ENST00000428136 LIFRP42702 1097 aa9.11□□□□□ -0.95
LRCH3-204ENST00000428136 RESP18Q5W5W9 173 aa9.11□□□□□ -0.95
LRCH3-204ENST00000428136 ARMCX5Q6P1M9 558 aa9.11□□□□□ -0.95
LRCH3-204ENST00000428136 APOA5Q6Q788 366 aa9.11□□□□□ -0.95
LRCH3-204ENST00000428136 PI16Q6UXB8 463 aa9.11□□□□□ -0.95
LRCH3-204ENST00000428136 ERCC4Q92889 916 aaPredicted RBP9.11□□□□□ -0.95
LRCH3-204ENST00000428136 GTPBP4Q9BZE4 634 aaKnown RBP9.11□□□□□ -0.95
LRCH3-204ENST00000428136 XPO4Q9C0E2 1151 aaKnown RBP9.11□□□□□ -0.95
LRCH3-204ENST00000428136 PIH1D3Q9NQM4 214 aaKnown RBP9.11□□□□□ -0.95
LRCH3-204ENST00000428136 FAM217BQ9NTX9 383 aaPredicted RBP9.11□□□□□ -0.95
LRCH3-204ENST00000428136 OGFRQ9NZT2 677 aa9.11□□□□□ -0.95
LRCH3-204ENST00000428136 NHSL1Q5SYE7 1610 aa9.11□□□□□ -0.95
LRCH3-204ENST00000428136 TRDNQ13061 729 aa9.11□□□□□ -0.95
LRCH3-204ENST00000428136 METTL24Q5JXM2 366 aa9.11□□□□□ -0.95
LRCH3-204ENST00000428136 SHC4Q6S5L8 630 aa9.11□□□□□ -0.95
LRCH3-204ENST00000428136 PIGBQ92521 554 aa9.11□□□□□ -0.95
LRCH3-204ENST00000428136 PKNOX2Q96KN3 472 aa9.11□□□□□ -0.95
LRCH3-204ENST00000428136 AK7Q96M32 723 aa9.11□□□□□ -0.95
LRCH3-204ENST00000428136 STRBPQ96SI9 672 aaKnown RBP9.11□□□□□ -0.95
LRCH3-204ENST00000428136 GREM2Q9H772 168 aa9.11□□□□□ -0.95
LRCH3-204ENST00000428136 L2HGDHQ9H9P8 463 aa9.11□□□□□ -0.95
LRCH3-204ENST00000428136 GJB4Q9NTQ9 266 aa9.11□□□□□ -0.95
LRCH3-204ENST00000428136 FAM53CQ9NYF3 392 aa9.11□□□□□ -0.95
LRCH3-204ENST00000428136 MYO5AQ9Y4I1 1855 aaKnown RBP9.11□□□□□ -0.95
LRCH3-204ENST00000428136 ANKRD18BA2A2Z9 1011 aa9.1□□□□□ -0.95
LRCH3-204ENST00000428136 STARD3NLO95772 234 aa9.1□□□□□ -0.95
LRCH3-204ENST00000428136 UQCRFS1P1P0C7P4 283 aa9.1□□□□□ -0.95
LRCH3-204ENST00000428136 CDC27P30260 824 aa9.1□□□□□ -0.95
LRCH3-204ENST00000428136 METAP2P50579 478 aaKnown RBP eCLIP9.1□□□□□ -0.95
LRCH3-204ENST00000428136 TAF7LQ5H9L4 462 aa9.1□□□□□ -0.95
LRCH3-204ENST00000428136 SLC9C2Q5TAH2 1124 aa9.1□□□□□ -0.95
LRCH3-204ENST00000428136 E4F1Q66K89 784 aaPredicted RBP9.1□□□□□ -0.95
LRCH3-204ENST00000428136 KRT40Q6A162 431 aa9.1□□□□□ -0.95
LRCH3-204ENST00000428136 LDHAL6AQ6ZMR3 332 aa9.1□□□□□ -0.95
LRCH3-204ENST00000428136 FILIP1Q7Z7B0 1213 aa9.1□□□□□ -0.95
LRCH3-204ENST00000428136 DNAJC10Q8IXB1 793 aa9.1□□□□□ -0.95
LRCH3-204ENST00000428136 JMYQ8N9B5 988 aa9.1□□□□□ -0.95
LRCH3-204ENST00000428136 ALG1Q9BT22 464 aa9.1□□□□□ -0.95
LRCH3-204ENST00000428136 TMX1Q9H3N1 280 aa9.1□□□□□ -0.95
LRCH3-204ENST00000428136 LY9Q9HBG7 655 aa9.1□□□□□ -0.95
LRCH3-204ENST00000428136 TPM4P67936 248 aa9.1□□□□□ -0.95
LRCH3-204ENST00000428136 HLFQ16534 295 aa9.1□□□□□ -0.95
LRCH3-204ENST00000428136 VPS37DQ86XT2 251 aa9.1□□□□□ -0.95
LRCH3-204ENST00000428136 ERO1AQ96HE7 468 aa9.1□□□□□ -0.95
LRCH3-204ENST00000428136 MTA3Q9BTC8 594 aa9.1□□□□□ -0.95
LRCH3-204ENST00000428136 IFNKQ9P0W0 207 aa9.1□□□□□ -0.95
LRCH3-204ENST00000428136 MORC2Q9Y6X9 1032 aaPredicted RBP9.1□□□□□ -0.95
LRCH3-204ENST00000428136 BCORQ6W2J9 1755 aa9.1□□□□□ -0.95
LRCH3-204ENST00000428136 NUP98P52948 1817 aa9.1□□□□□ -0.95
LRCH3-204ENST00000428136 DISP2A7MBM2 1401 aa9.1□□□□□ -0.95
LRCH3-204ENST00000428136 ERVV-1B6SEH8 477 aa9.1□□□□□ -0.95
LRCH3-204ENST00000428136 CUTAO60888 179 aa9.1□□□□□ -0.95
LRCH3-204ENST00000428136 PDE6AP16499 860 aa9.1□□□□□ -0.95
LRCH3-204ENST00000428136 CCDC93Q567U6 631 aa9.1□□□□□ -0.95
LRCH3-204ENST00000428136 CCDC102BQ68D86 513 aa9.1□□□□□ -0.95
LRCH3-204ENST00000428136 KIF18AQ8NI77 898 aa9.1□□□□□ -0.95
LRCH3-204ENST00000428136 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.1□□□□□ -0.95
LRCH3-204ENST00000428136 DDX41Q9UJV9 622 aaKnown RBP9.1□□□□□ -0.95
LRCH3-204ENST00000428136 DENND2AQ9ULE3 1009 aa9.1□□□□□ -0.95
LRCH3-204ENST00000428136 ZNF532Q9HCE3 1301 aa9.1□□□□□ -0.95
LRCH3-204ENST00000428136 COL22A1Q8NFW1 1626 aaPredicted RBP9.09□□□□□ -0.95
LRCH3-204ENST00000428136 PATL2C9JE40 543 aaKnown RBP9.09□□□□□ -0.95
LRCH3-204ENST00000428136 RANBP6O60518 1105 aaKnown RBP9.09□□□□□ -0.95
LRCH3-204ENST00000428136 PDE8AO60658 829 aa9.09□□□□□ -0.95
LRCH3-204ENST00000428136 SYKP43405 635 aa9.09□□□□□ -0.95
LRCH3-204ENST00000428136 CBX1P83916 185 aa9.09□□□□□ -0.95
LRCH3-204ENST00000428136 MDM2Q00987 491 aaPredicted RBP9.09□□□□□ -0.95
LRCH3-204ENST00000428136 ASAP1Q9ULH1 1129 aa9.09□□□□□ -0.95
LRCH3-204ENST00000428136 BCL9O00512 1426 aa9.09□□□□□ -0.95
LRCH3-204ENST00000428136 CYP19A1P11511 503 aaPredicted RBP9.09□□□□□ -0.95
LRCH3-204ENST00000428136 RCAN1P53805 252 aa9.09□□□□□ -0.95
LRCH3-204ENST00000428136 FANCCQ00597 558 aa9.09□□□□□ -0.95
LRCH3-204ENST00000428136 ZRSR1Q15695 479 aaKnown RBP9.09□□□□□ -0.95
LRCH3-204ENST00000428136 CPLX2Q6PUV4 134 aaKnown RBP9.09□□□□□ -0.95
LRCH3-204ENST00000428136 SYNE4Q8N205 404 aa9.09□□□□□ -0.95
LRCH3-204ENST00000428136 PPP1R13BQ96KQ4 1090 aa9.09□□□□□ -0.95
LRCH3-204ENST00000428136 CHD4Q14839 1912 aa9.09□□□□□ -0.95
LRCH3-204ENST00000428136 MROH5Q6ZUA9 1318 aa9.09□□□□□ -0.95
LRCH3-204ENST00000428136 ZBTB43O43298 467 aa9.09□□□□□ -0.96
LRCH3-204ENST00000428136 FMNL1O95466 1100 aaPredicted RBP9.09□□□□□ -0.96
LRCH3-204ENST00000428136 NT5DC1Q5TFE4 455 aa9.09□□□□□ -0.96
LRCH3-204ENST00000428136 LPIN2Q92539 896 aa9.09□□□□□ -0.96
LRCH3-204ENST00000428136 AIFM3Q96NN9 605 aa9.09□□□□□ -0.96
LRCH3-204ENST00000428136 SENP2Q9HC62 589 aa9.09□□□□□ -0.96
LRCH3-204ENST00000428136 UBN2Q6ZU65 1347 aa9.08□□□□□ -0.96
LRCH3-204ENST00000428136 SLIT2O94813 1529 aa9.08□□□□□ -0.96
LRCH3-204ENST00000428136 IRS4O14654 1257 aaPredicted RBP9.08□□□□□ -0.96
LRCH3-204ENST00000428136 IFNAR1P17181 557 aa9.08□□□□□ -0.96
LRCH3-204ENST00000428136 PUM3Q15397 648 aaKnown RBP9.08□□□□□ -0.96
LRCH3-204ENST00000428136 TMC6Q7Z403 805 aa9.08□□□□□ -0.96
LRCH3-204ENST00000428136 ZNF34Q8IZ26 560 aa9.08□□□□□ -0.96
LRCH3-204ENST00000428136 ZNF215Q9UL58 517 aaPredicted RBP9.08□□□□□ -0.96
LRCH3-204ENST00000428136 TACC3Q9Y6A5 838 aa9.08□□□□□ -0.96
LRCH3-204ENST00000428136 PLCH1Q4KWH8 1693 aa9.08□□□□□ -0.96
LRCH3-204ENST00000428136 CBFA2T2O43439 604 aa9.08□□□□□ -0.96
LRCH3-204ENST00000428136 IARSP41252 1262 aaKnown RBP9.08□□□□□ -0.96
LRCH3-204ENST00000428136 PHKA1P46020 1223 aa9.08□□□□□ -0.96
LRCH3-204ENST00000428136 KRBA2Q6ZNG9 492 aa9.08□□□□□ -0.96
LRCH3-204ENST00000428136 METTL16Q86W50 562 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms