RNA–Protein interactions for RNA: ENST00000425208.6

HMGA2-205, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-205ENST00000425208 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.58■■□□□ 1.85
HMGA2-205ENST00000425208 OSBPL3Q9H4L5 887 aa26.58■■□□□ 1.85
HMGA2-205ENST00000425208 GPR75-ASB3A0A0A6YYF3 556 aa26.57■■□□□ 1.84
HMGA2-205ENST00000425208 C1QTNF8P60827 252 aa26.57■■□□□ 1.84
HMGA2-205ENST00000425208 TNFAIP1Q13829 316 aa26.57■■□□□ 1.84
HMGA2-205ENST00000425208 SLC9C2Q5TAH2 1124 aa26.57■■□□□ 1.84
HMGA2-205ENST00000425208 USP48Q86UV5 1035 aa26.57■■□□□ 1.84
HMGA2-205ENST00000425208 NOL10Q9BSC4 688 aaKnown RBP26.57■■□□□ 1.84
HMGA2-205ENST00000425208 ADM5C9JUS6 153 aa26.56■■□□□ 1.84
HMGA2-205ENST00000425208 MAP4K4O95819 1239 aaPredicted RBP26.56■■□□□ 1.84
HMGA2-205ENST00000425208 CYP7A1P22680 504 aa26.56■■□□□ 1.84
HMGA2-205ENST00000425208 PDE4AP27815 886 aa26.56■■□□□ 1.84
HMGA2-205ENST00000425208 PDE6AP16499 860 aa26.56■■□□□ 1.84
HMGA2-205ENST00000425208 CDC42EP5Q6NZY7 148 aa26.56■■□□□ 1.84
HMGA2-205ENST00000425208 KBTBD3Q8NAB2 608 aa26.56■■□□□ 1.84
HMGA2-205ENST00000425208 SCAF8Q9UPN6 1271 aaKnown RBP26.56■■□□□ 1.84
HMGA2-205ENST00000425208 PASKQ96RG2 1323 aa26.55■■□□□ 1.84
HMGA2-205ENST00000425208 TRAF5O00463 557 aa26.55■■□□□ 1.84
HMGA2-205ENST00000425208 BAG3O95817 575 aa26.55■■□□□ 1.84
HMGA2-205ENST00000425208 ZSCAN25Q6NSZ9 544 aa26.55■■□□□ 1.84
HMGA2-205ENST00000425208 ADGRA1Q86SQ6 560 aa26.55■■□□□ 1.84
HMGA2-205ENST00000425208 USP40Q9NVE5 1235 aa26.55■■□□□ 1.84
HMGA2-205ENST00000425208 TRPM7Q96QT4 1865 aa26.55■■□□□ 1.84
HMGA2-205ENST00000425208 TNNI2P48788 182 aa26.54■■□□□ 1.84
HMGA2-205ENST00000425208 DEFB129Q9H1M3 183 aa26.54■■□□□ 1.84
HMGA2-205ENST00000425208 AATFQ9NY61 560 aaKnown RBP eCLIP26.54■■□□□ 1.84
HMGA2-205ENST00000425208 TCP10L2B9ZVM9 353 aa26.53■■□□□ 1.84
HMGA2-205ENST00000425208 CACNB3P54284 484 aa26.53■■□□□ 1.84
HMGA2-205ENST00000425208 LRRFIP1Q32MZ4 808 aaKnown RBP26.53■■□□□ 1.84
HMGA2-205ENST00000425208 FKBP1CQ5VVH2 108 aa26.53■■□□□ 1.84
HMGA2-205ENST00000425208 PPP2R3BQ9Y5P8 575 aa26.53■■□□□ 1.84
HMGA2-205ENST00000425208 ZNF532Q9HCE3 1301 aa26.53■■□□□ 1.84
HMGA2-205ENST00000425208 ADD2P35612 726 aa26.52■■□□□ 1.84
HMGA2-205ENST00000425208 AK9Q5TCS8 1911 aa26.51■■□□□ 1.83
HMGA2-205ENST00000425208 PLCG2P16885 1265 aa26.51■■□□□ 1.83
HMGA2-205ENST00000425208 CERS3Q8IU89 383 aa26.51■■□□□ 1.83
HMGA2-205ENST00000425208 EVI5LQ96CN4 794 aa26.51■■□□□ 1.83
HMGA2-205ENST00000425208 FSD1Q9BTV5 496 aa26.51■■□□□ 1.83
HMGA2-205ENST00000425208 TCRBV5S4A2TA0A5A2 114 aa26.5■■□□□ 1.83
HMGA2-205ENST00000425208 RHBDL3P58872 404 aa26.5■■□□□ 1.83
HMGA2-205ENST00000425208 PPP4CP60510 307 aa26.5■■□□□ 1.83
HMGA2-205ENST00000425208 RASA3Q14644 834 aa26.5■■□□□ 1.83
HMGA2-205ENST00000425208 UBE3CQ15386 1083 aa26.5■■□□□ 1.83
HMGA2-205ENST00000425208 DLK2Q6UY11 383 aa26.5■■□□□ 1.83
HMGA2-205ENST00000425208 MIGA1Q8NAN2 632 aa26.5■■□□□ 1.83
HMGA2-205ENST00000425208 CDCA5Q96FF9 252 aa26.5■■□□□ 1.83
HMGA2-205ENST00000425208 FMR1Q06787 632 aaKnown RBP eCLIP26.49■■□□□ 1.83
HMGA2-205ENST00000425208 FAM83AQ86UY5 434 aa26.49■■□□□ 1.83
HMGA2-205ENST00000425208 TRIM6-TRIM34B2RNG4 842 aa26.48■■□□□ 1.83
HMGA2-205ENST00000425208 ZFYP08048 801 aaPredicted RBP26.48■■□□□ 1.83
HMGA2-205ENST00000425208 NFIAQ12857 509 aa26.48■■□□□ 1.83
HMGA2-205ENST00000425208 TEX11Q8IYF3 940 aa26.48■■□□□ 1.83
HMGA2-205ENST00000425208 IDI2Q9BXS1 227 aa26.48■■□□□ 1.83
HMGA2-205ENST00000425208 ZNF408Q9H9D4 720 aa26.48■■□□□ 1.83
HMGA2-205ENST00000425208 RFX7Q2KHR2 1363 aa26.48■■□□□ 1.83
HMGA2-205ENST00000425208 CDK5RAP2Q96SN8 1893 aa26.48■■□□□ 1.83
HMGA2-205ENST00000425208 WDHD1O75717 1129 aaPredicted RBP26.48■■□□□ 1.83
HMGA2-205ENST00000425208 APLP1P51693 650 aa26.48■■□□□ 1.83
HMGA2-205ENST00000425208 SH3RF3Q8TEJ3 882 aaPredicted RBP26.48■■□□□ 1.83
HMGA2-205ENST00000425208 CNTNAP1P78357 1384 aa26.47■■□□□ 1.83
HMGA2-205ENST00000425208 FOCADQ5VW36 1801 aa26.47■■□□□ 1.83
HMGA2-205ENST00000425208 MAGEB6P1A0A0J9YX57 407 aa26.47■■□□□ 1.83
HMGA2-205ENST00000425208 CELF2O95319 508 aaKnown RBP26.47■■□□□ 1.83
HMGA2-205ENST00000425208 DYNLL1P63167 89 aaKnown RBP26.47■■□□□ 1.83
HMGA2-205ENST00000425208 PRAMEF18Q5VWM3 479 aa26.47■■□□□ 1.83
HMGA2-205ENST00000425208 TMEM39BQ9GZU3 492 aa26.47■■□□□ 1.83
HMGA2-205ENST00000425208 RPAP1Q9BWH6 1393 aaPredicted RBP26.46■■□□□ 1.83
HMGA2-205ENST00000425208 RNF113AO15541 343 aaKnown RBP26.46■■□□□ 1.83
HMGA2-205ENST00000425208 NF2P35240 595 aa26.46■■□□□ 1.83
HMGA2-205ENST00000425208 RGS3P49796 1198 aa26.46■■□□□ 1.83
HMGA2-205ENST00000425208 PICALMQ13492 652 aa26.46■■□□□ 1.83
HMGA2-205ENST00000425208 RILPL2Q969X0 211 aa26.46■■□□□ 1.83
HMGA2-205ENST00000425208 RIOK1Q9BRS2 568 aaKnown RBP26.46■■□□□ 1.83
HMGA2-205ENST00000425208 FAM198AQ9UFP1 575 aa26.46■■□□□ 1.83
HMGA2-205ENST00000425208 CHGBP05060 677 aa26.45■■□□□ 1.82
HMGA2-205ENST00000425208 HSPA6P17066 643 aa26.45■■□□□ 1.82
HMGA2-205ENST00000425208 TCP10Q12799 353 aa26.45■■□□□ 1.82
HMGA2-205ENST00000425208 SLFNL1Q499Z3 407 aa26.45■■□□□ 1.82
HMGA2-205ENST00000425208 TTC22Q5TAA0 569 aa26.45■■□□□ 1.82
HMGA2-205ENST00000425208 FAM151AQ8WW52 585 aa26.45■■□□□ 1.82
HMGA2-205ENST00000425208 APPBP2Q92624 585 aa26.45■■□□□ 1.82
HMGA2-205ENST00000425208 TMEM88BA6NKF7 163 aa26.44■■□□□ 1.82
HMGA2-205ENST00000425208 ENTPD3O75355 529 aa26.44■■□□□ 1.82
HMGA2-205ENST00000425208 NPM3O75607 178 aaKnown RBP26.43■■□□□ 1.82
HMGA2-205ENST00000425208 SUPT20HL1Q3ZLR7 823 aa26.43■■□□□ 1.82
HMGA2-205ENST00000425208 CST9Q5W186 159 aa26.43■■□□□ 1.82
HMGA2-205ENST00000425208 TICAM2Q86XR7 235 aa26.43■■□□□ 1.82
HMGA2-205ENST00000425208 TEPSINQ96N21 525 aa26.43■■□□□ 1.82
HMGA2-205ENST00000425208 DDX4Q9NQI0 724 aaKnown RBP26.43■■□□□ 1.82
HMGA2-205ENST00000425208 AIDAQ96BJ3 306 aa26.42■■□□□ 1.82
HMGA2-205ENST00000425208 PAPPA2Q9BXP8 1791 aa26.41■■□□□ 1.82
HMGA2-205ENST00000425208 MBD4O95243 580 aa26.41■■□□□ 1.82
HMGA2-205ENST00000425208 GSPT1P15170 499 aaKnown RBP26.41■■□□□ 1.82
HMGA2-205ENST00000425208 NBPF12Q5TAG4 269 aaPredicted RBP26.41■■□□□ 1.82
HMGA2-205ENST00000425208 TGFBRAP1Q8WUH2 860 aa26.41■■□□□ 1.82
HMGA2-205ENST00000425208 CRNKL1Q9BZJ0 848 aaKnown RBP26.41■■□□□ 1.82
HMGA2-205ENST00000425208 PUS7LQ9H0K6 701 aaKnown RBP26.41■■□□□ 1.82
HMGA2-205ENST00000425208 CREBZFQ9NS37 354 aa26.41■■□□□ 1.82
HMGA2-205ENST00000425208 FLT1P17948 1338 aa26.41■■□□□ 1.82
HMGA2-205ENST00000425208 SKAP1Q86WV1 359 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms