RNA–Protein interactions for RNA: ENST00000416438.6

LINC00475-202, long intergenic non-protein coding RNA 475, humanhuman

TSL 2 BASIC

Gene LINC00475, Length 2,506 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-202ENST00000416438 PAPPAQ13219 1627 aa17.06■□□□□ 0.32
LINC00475-202ENST00000416438 ANKRD18BA2A2Z9 1011 aa17.06■□□□□ 0.32
LINC00475-202ENST00000416438 SH2B2O14492 632 aaPredicted RBP17.06■□□□□ 0.32
LINC00475-202ENST00000416438 ATP1A3P13637 1013 aa17.06■□□□□ 0.32
LINC00475-202ENST00000416438 ZSCAN20P17040 1043 aaPredicted RBP17.06■□□□□ 0.32
LINC00475-202ENST00000416438 CCDC102BQ68D86 513 aa17.06■□□□□ 0.32
LINC00475-202ENST00000416438 ZMYM6O95789 1325 aa17.06■□□□□ 0.32
LINC00475-202ENST00000416438 IRS4O14654 1257 aaPredicted RBP17.06■□□□□ 0.32
LINC00475-202ENST00000416438 PTPN21Q16825 1174 aa17.06■□□□□ 0.32
LINC00475-202ENST00000416438 APOA5Q6Q788 366 aa17.06■□□□□ 0.32
LINC00475-202ENST00000416438 SHC4Q6S5L8 630 aa17.06■□□□□ 0.32
LINC00475-202ENST00000416438 ZNF215Q9UL58 517 aaPredicted RBP17.06■□□□□ 0.32
LINC00475-202ENST00000416438 SPEF2Q9C093 1822 aa17.06■□□□□ 0.32
LINC00475-202ENST00000416438 PDE6AP16499 860 aa17.05■□□□□ 0.32
LINC00475-202ENST00000416438 SYKP43405 635 aa17.05■□□□□ 0.32
LINC00475-202ENST00000416438 CTSWP56202 376 aa17.05■□□□□ 0.32
LINC00475-202ENST00000416438 GNL2Q13823 731 aaKnown RBP17.05■□□□□ 0.32
LINC00475-202ENST00000416438 NFXL1Q6ZNB6 911 aa17.05■□□□□ 0.32
LINC00475-202ENST00000416438 STK11IPQ8N1F8 1099 aa17.05■□□□□ 0.32
LINC00475-202ENST00000416438 VGLL2Q8N8G2 317 aa17.05■□□□□ 0.32
LINC00475-202ENST00000416438 OSBPL5Q9H0X9 879 aaPredicted RBP17.05■□□□□ 0.32
LINC00475-202ENST00000416438 TRMT112Q9UI30 125 aaKnown RBP17.05■□□□□ 0.32
LINC00475-202ENST00000416438 CTDSPL2Q05D32 466 aa17.05■□□□□ 0.32
LINC00475-202ENST00000416438 E4F1Q66K89 784 aaPredicted RBP17.05■□□□□ 0.32
LINC00475-202ENST00000416438 TOGARAM1Q9Y4F4 1720 aa17.05■□□□□ 0.32
LINC00475-202ENST00000416438 RANBP6O60518 1105 aaKnown RBP17.04■□□□□ 0.32
LINC00475-202ENST00000416438 PDE8BO95263 885 aa17.04■□□□□ 0.32
LINC00475-202ENST00000416438 STARD3NLO95772 234 aa17.04■□□□□ 0.32
LINC00475-202ENST00000416438 PNOCQ13519 176 aa17.04■□□□□ 0.32
LINC00475-202ENST00000416438 IGDCC4Q8TDY8 1250 aa17.04■□□□□ 0.32
LINC00475-202ENST00000416438 TBC1D2BQ9UPU7 963 aa17.04■□□□□ 0.32
LINC00475-202ENST00000416438 GSDMDP57764 484 aa17.04■□□□□ 0.32
LINC00475-202ENST00000416438 PTPAQ15257 358 aa17.04■□□□□ 0.32
LINC00475-202ENST00000416438 SPECC1Q5M775 1068 aa17.04■□□□□ 0.32
LINC00475-202ENST00000416438 SLC4A9Q96Q91 983 aa17.04■□□□□ 0.32
LINC00475-202ENST00000416438 BPIFA3Q9BQP9 254 aa17.04■□□□□ 0.32
LINC00475-202ENST00000416438 FAM217BQ9NTX9 383 aaPredicted RBP17.04■□□□□ 0.32
LINC00475-202ENST00000416438 TACC3Q9Y6A5 838 aa17.04■□□□□ 0.32
LINC00475-202ENST00000416438 UBE3CQ15386 1083 aa17.03■□□□□ 0.32
LINC00475-202ENST00000416438 DPF2Q92785 391 aa17.03■□□□□ 0.32
LINC00475-202ENST00000416438 HSD3B7Q9H2F3 369 aa17.03■□□□□ 0.32
LINC00475-202ENST00000416438 WDR19Q8NEZ3 1342 aa17.03■□□□□ 0.32
LINC00475-202ENST00000416438 ZBTB43O43298 467 aa17.03■□□□□ 0.32
LINC00475-202ENST00000416438 IGSF3O75054 1194 aa17.03■□□□□ 0.32
LINC00475-202ENST00000416438 FANCCQ00597 558 aa17.03■□□□□ 0.32
LINC00475-202ENST00000416438 NTRK3Q16288 839 aa17.03■□□□□ 0.32
LINC00475-202ENST00000416438 AIDAQ96BJ3 306 aa17.03■□□□□ 0.32
LINC00475-202ENST00000416438 STRBPQ96SI9 672 aaKnown RBP17.03■□□□□ 0.32
LINC00475-202ENST00000416438 ZBTB1Q9Y2K1 713 aa17.03■□□□□ 0.32
LINC00475-202ENST00000416438 TCRBV5S4A2TA0A5A2 114 aa17.02■□□□□ 0.32
LINC00475-202ENST00000416438 GOLGA8AA7E2F4 631 aa17.02■□□□□ 0.32
LINC00475-202ENST00000416438 NPHP1O15259 732 aa17.02■□□□□ 0.32
LINC00475-202ENST00000416438 IARSP41252 1262 aaKnown RBP17.02■□□□□ 0.32
LINC00475-202ENST00000416438 TTF1Q15361 905 aaPredicted RBP17.02■□□□□ 0.32
LINC00475-202ENST00000416438 TMEM67Q5HYA8 995 aa17.02■□□□□ 0.32
LINC00475-202ENST00000416438 CCDC82Q8N4S0 544 aa17.02■□□□□ 0.32
LINC00475-202ENST00000416438 MAP3K14Q99558 947 aa17.02■□□□□ 0.32
LINC00475-202ENST00000416438 LY9Q9HBG7 655 aa17.02■□□□□ 0.32
LINC00475-202ENST00000416438 ZSWIM5Q9P217 1185 aa17.02■□□□□ 0.32
LINC00475-202ENST00000416438 IMPACTQ9P2X3 320 aa17.02■□□□□ 0.32
LINC00475-202ENST00000416438 ABCA3Q99758 1704 aa17.02■□□□□ 0.32
LINC00475-202ENST00000416438 SYCP1Q15431 976 aa17.02■□□□□ 0.31
LINC00475-202ENST00000416438 ZKSCAN3Q9BRR0 538 aa17.02■□□□□ 0.31
LINC00475-202ENST00000416438 SLC26A6Q9BXS9 759 aa17.02■□□□□ 0.31
LINC00475-202ENST00000416438 TEX13AQ9BXU3 409 aaPredicted RBP17.02■□□□□ 0.31
LINC00475-202ENST00000416438 EPB41L4AQ9HCS5 686 aaPredicted RBP17.02■□□□□ 0.31
LINC00475-202ENST00000416438 ZHX1Q9UKY1 873 aaPredicted RBP17.02■□□□□ 0.31
LINC00475-202ENST00000416438 HPSEQ9Y251 543 aa17.02■□□□□ 0.31
LINC00475-202ENST00000416438 CDHR2Q9BYE9 1310 aa17.02■□□□□ 0.31
LINC00475-202ENST00000416438 ABCC12Q96J65 1359 aa17.02■□□□□ 0.31
LINC00475-202ENST00000416438 FOXN1O15353 648 aa17.01■□□□□ 0.31
LINC00475-202ENST00000416438 SFPQP23246 707 aaKnown RBP eCLIP17.01■□□□□ 0.31
LINC00475-202ENST00000416438 GUCY1A2P33402 732 aa17.01■□□□□ 0.31
LINC00475-202ENST00000416438 GOLGA8FQ08AF8 430 aa17.01■□□□□ 0.31
LINC00475-202ENST00000416438 GOLGA8DPQ0D2H9 430 aa17.01■□□□□ 0.31
LINC00475-202ENST00000416438 LONRF3Q496Y0 759 aa17.01■□□□□ 0.31
LINC00475-202ENST00000416438 FOXP4Q8IVH2 680 aaPredicted RBP17.01■□□□□ 0.31
LINC00475-202ENST00000416438 MAGEB6Q8N7X4 407 aa17.01■□□□□ 0.31
LINC00475-202ENST00000416438 KIF18AQ8NI77 898 aa17.01■□□□□ 0.31
LINC00475-202ENST00000416438 ARMT1Q9H993 441 aa17.01■□□□□ 0.31
LINC00475-202ENST00000416438 PRKAB2O43741 272 aa17.01■□□□□ 0.31
LINC00475-202ENST00000416438 HSP90AA4PQ58FG1 418 aa17.01■□□□□ 0.31
LINC00475-202ENST00000416438 CPLX2Q6PUV4 134 aaKnown RBP17.01■□□□□ 0.31
LINC00475-202ENST00000416438 CMTR1Q8N1G2 835 aaKnown RBP17.01■□□□□ 0.31
LINC00475-202ENST00000416438 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.01■□□□□ 0.31
LINC00475-202ENST00000416438 BTG4Q9NY30 223 aa17.01■□□□□ 0.31
LINC00475-202ENST00000416438 UBN2Q6ZU65 1347 aa17.01■□□□□ 0.31
LINC00475-202ENST00000416438 IFIT3O14879 490 aaKnown RBP17■□□□□ 0.31
LINC00475-202ENST00000416438 CDKL5O76039 1030 aa17■□□□□ 0.31
LINC00475-202ENST00000416438 MBD4O95243 580 aa17■□□□□ 0.31
LINC00475-202ENST00000416438 TPM4P67936 248 aa17■□□□□ 0.31
LINC00475-202ENST00000416438 RRP12Q5JTH9 1297 aaKnown RBP17■□□□□ 0.31
LINC00475-202ENST00000416438 IFNL3Q8IZI9 196 aa17■□□□□ 0.31
LINC00475-202ENST00000416438 PPP1R13BQ96KQ4 1090 aa17■□□□□ 0.31
LINC00475-202ENST00000416438 TUBE1Q9UJT0 475 aa17■□□□□ 0.31
LINC00475-202ENST00000416438 PPP6R2O75170 966 aa17■□□□□ 0.31
LINC00475-202ENST00000416438 SYT10Q6XYQ8 523 aa17■□□□□ 0.31
LINC00475-202ENST00000416438 KAT6BQ8WYB5 2073 aa17■□□□□ 0.31
LINC00475-202ENST00000416438 ZNF512BQ96KM6 892 aaPredicted RBP17■□□□□ 0.31
LINC00475-202ENST00000416438 BTBD18B2RXH4 712 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms