RNA–Protein interactions for RNA: ENST00000415220.6

PRKD1-202, Transcript of protein kinase D1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRKD1, Length 3,189 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-202ENST00000415220 CHAF1AQ13111 956 aaPredicted RBP17.03■□□□□ 0.32
PRKD1-202ENST00000415220 KRT40Q6A162 431 aa17.03■□□□□ 0.32
PRKD1-202ENST00000415220 VPS37DQ86XT2 251 aa17.03■□□□□ 0.32
PRKD1-202ENST00000415220 KCNG4Q8TDN1 519 aa17.03■□□□□ 0.32
PRKD1-202ENST00000415220 PKNOX2Q96KN3 472 aa17.03■□□□□ 0.32
PRKD1-202ENST00000415220 STRBPQ96SI9 672 aaKnown RBP17.03■□□□□ 0.32
PRKD1-202ENST00000415220 TEX13AQ9BXU3 409 aaPredicted RBP17.03■□□□□ 0.32
PRKD1-202ENST00000415220 TRMT1Q9NXH9 659 aaKnown RBP17.03■□□□□ 0.32
PRKD1-202ENST00000415220 IGDCC4Q8TDY8 1250 aa17.02■□□□□ 0.32
PRKD1-202ENST00000415220 CLIC6Q96NY7 704 aa17.02■□□□□ 0.32
PRKD1-202ENST00000415220 STRCQ7RTU9 1775 aa17.02■□□□□ 0.32
PRKD1-202ENST00000415220 SKILP12757 684 aa17.02■□□□□ 0.31
PRKD1-202ENST00000415220 TRDNQ13061 729 aa17.02■□□□□ 0.31
PRKD1-202ENST00000415220 SYNE3Q6ZMZ3 975 aa17.02■□□□□ 0.31
PRKD1-202ENST00000415220 DZIP3Q86Y13 1208 aaKnown RBP17.02■□□□□ 0.31
PRKD1-202ENST00000415220 ZNF592Q92610 1267 aa17.02■□□□□ 0.31
PRKD1-202ENST00000415220 ARMT1Q9H993 441 aa17.02■□□□□ 0.31
PRKD1-202ENST00000415220 LY9Q9HBG7 655 aa17.02■□□□□ 0.31
PRKD1-202ENST00000415220 PRDM10Q9NQV6 1147 aa17.02■□□□□ 0.31
PRKD1-202ENST00000415220 COL4A1P02462 1669 aa17.02■□□□□ 0.31
PRKD1-202ENST00000415220 CTIFO43310 598 aaKnown RBP17.01■□□□□ 0.31
PRKD1-202ENST00000415220 ARID4AP29374 1257 aaPredicted RBP17.01■□□□□ 0.31
PRKD1-202ENST00000415220 RASGRF1Q13972 1273 aa17.01■□□□□ 0.31
PRKD1-202ENST00000415220 PTPN21Q16825 1174 aa17.01■□□□□ 0.31
PRKD1-202ENST00000415220 BRAPQ7Z569 592 aa17.01■□□□□ 0.31
PRKD1-202ENST00000415220 MAGEB6Q8N7X4 407 aa17.01■□□□□ 0.31
PRKD1-202ENST00000415220 ZKSCAN3Q9BRR0 538 aa17.01■□□□□ 0.31
PRKD1-202ENST00000415220 PDE8AO60658 829 aa17.01■□□□□ 0.31
PRKD1-202ENST00000415220 UBE3CQ15386 1083 aa17.01■□□□□ 0.31
PRKD1-202ENST00000415220 NTRK3Q16288 839 aa17.01■□□□□ 0.31
PRKD1-202ENST00000415220 SHC4Q6S5L8 630 aa17.01■□□□□ 0.31
PRKD1-202ENST00000415220 SMIM22K7EJ46 135 aa17.01■□□□□ 0.31
PRKD1-202ENST00000415220 MBD4O95243 580 aa17.01■□□□□ 0.31
PRKD1-202ENST00000415220 FGFR2P21802 821 aa17.01■□□□□ 0.31
PRKD1-202ENST00000415220 GUCY1A2P33402 732 aa17.01■□□□□ 0.31
PRKD1-202ENST00000415220 PPP4R3BQ5MIZ7 849 aa17.01■□□□□ 0.31
PRKD1-202ENST00000415220 XPO4Q9C0E2 1151 aaKnown RBP17.01■□□□□ 0.31
PRKD1-202ENST00000415220 NCAPHQ15003 741 aa17■□□□□ 0.31
PRKD1-202ENST00000415220 CMTR1Q8N1G2 835 aaKnown RBP17■□□□□ 0.31
PRKD1-202ENST00000415220 AIDAQ96BJ3 306 aa17■□□□□ 0.31
PRKD1-202ENST00000415220 ZNF512BQ96KM6 892 aaPredicted RBP17■□□□□ 0.31
PRKD1-202ENST00000415220 CCDC94Q9BW85 323 aaPredicted RBP17■□□□□ 0.31
PRKD1-202ENST00000415220 ZSWIM5Q9P217 1185 aa17■□□□□ 0.31
PRKD1-202ENST00000415220 SLC3A2P08195 630 aaKnown RBP17■□□□□ 0.31
PRKD1-202ENST00000415220 SUSD4Q5VX71 490 aa17■□□□□ 0.31
PRKD1-202ENST00000415220 WDR19Q8NEZ3 1342 aa17■□□□□ 0.31
PRKD1-202ENST00000415220 IFNKQ9P0W0 207 aa17■□□□□ 0.31
PRKD1-202ENST00000415220 A0A0G2JS52 829 aa16.99■□□□□ 0.31
PRKD1-202ENST00000415220 WTIPA6NIX2 430 aaPredicted RBP16.99■□□□□ 0.31
PRKD1-202ENST00000415220 NCBP1Q09161 790 aaKnown RBP16.99■□□□□ 0.31
PRKD1-202ENST00000415220 SLC39A14Q15043 492 aa16.99■□□□□ 0.31
PRKD1-202ENST00000415220 PTPAQ15257 358 aa16.99■□□□□ 0.31
PRKD1-202ENST00000415220 SPECC1Q5M775 1068 aa16.99■□□□□ 0.31
PRKD1-202ENST00000415220 NFXL1Q6ZNB6 911 aa16.99■□□□□ 0.31
PRKD1-202ENST00000415220 MTERF4Q7Z6M4 381 aaKnown RBP16.99■□□□□ 0.31
PRKD1-202ENST00000415220 SPATA5Q8NB90 893 aa16.99■□□□□ 0.31
PRKD1-202ENST00000415220 MAP3K14Q99558 947 aa16.99■□□□□ 0.31
PRKD1-202ENST00000415220 HSD3B7Q9H2F3 369 aa16.99■□□□□ 0.31
PRKD1-202ENST00000415220 NHSL1Q5SYE7 1610 aa16.99■□□□□ 0.31
PRKD1-202ENST00000415220 RBM6P78332 1123 aaKnown RBP16.99■□□□□ 0.31
PRKD1-202ENST00000415220 TTF1Q15361 905 aaPredicted RBP16.99■□□□□ 0.31
PRKD1-202ENST00000415220 IFNL3Q8IZI9 196 aa16.99■□□□□ 0.31
PRKD1-202ENST00000415220 ANKRD7Q92527 254 aa16.99■□□□□ 0.31
PRKD1-202ENST00000415220 SMC2O95347 1197 aa16.99■□□□□ 0.31
PRKD1-202ENST00000415220 ATP1A3P13637 1013 aa16.99■□□□□ 0.31
PRKD1-202ENST00000415220 PNOCQ13519 176 aa16.99■□□□□ 0.31
PRKD1-202ENST00000415220 PUM3Q15397 648 aaKnown RBP16.99■□□□□ 0.31
PRKD1-202ENST00000415220 TMEM67Q5HYA8 995 aa16.99■□□□□ 0.31
PRKD1-202ENST00000415220 ZNF34Q8IZ26 560 aa16.99■□□□□ 0.31
PRKD1-202ENST00000415220 ZBTB43O43298 467 aa16.98■□□□□ 0.31
PRKD1-202ENST00000415220 CMA1P23946 247 aa16.98■□□□□ 0.31
PRKD1-202ENST00000415220 LCORLQ8N3X6 602 aa16.98■□□□□ 0.31
PRKD1-202ENST00000415220 CCDC82Q8N4S0 544 aa16.98■□□□□ 0.31
PRKD1-202ENST00000415220 DISP2A7MBM2 1401 aa16.98■□□□□ 0.31
PRKD1-202ENST00000415220 CHD4Q14839 1912 aa16.98■□□□□ 0.31
PRKD1-202ENST00000415220 LRP5O75197 1615 aa16.98■□□□□ 0.31
PRKD1-202ENST00000415220 GOLGA8AA7E2F4 631 aa16.98■□□□□ 0.31
PRKD1-202ENST00000415220 BCAMP50895 628 aa16.98■□□□□ 0.31
PRKD1-202ENST00000415220 CBX1P83916 185 aa16.98■□□□□ 0.31
PRKD1-202ENST00000415220 LPIN2Q92539 896 aa16.98■□□□□ 0.31
PRKD1-202ENST00000415220 SLC26A6Q9BXS9 759 aa16.98■□□□□ 0.31
PRKD1-202ENST00000415220 IQSEC3Q9UPP2 1182 aaPredicted RBP16.98■□□□□ 0.31
PRKD1-202ENST00000415220 SPDYE4A6NLX3 237 aa16.97■□□□□ 0.31
PRKD1-202ENST00000415220 FOXN1O15353 648 aa16.97■□□□□ 0.31
PRKD1-202ENST00000415220 U2AF2P26368 475 aaKnown RBP eCLIP16.97■□□□□ 0.31
PRKD1-202ENST00000415220 LMOD1P29536 600 aaPredicted RBP16.97■□□□□ 0.31
PRKD1-202ENST00000415220 NLRP12P59046 1061 aa16.97■□□□□ 0.31
PRKD1-202ENST00000415220 GRIN1Q05586 938 aa16.97■□□□□ 0.31
PRKD1-202ENST00000415220 RRP12Q5JTH9 1297 aaKnown RBP16.97■□□□□ 0.31
PRKD1-202ENST00000415220 CEP135Q66GS9 1140 aa16.97■□□□□ 0.31
PRKD1-202ENST00000415220 ARMCX5Q6P1M9 558 aa16.97■□□□□ 0.31
PRKD1-202ENST00000415220 NAT10Q9H0A0 1025 aaKnown RBP16.97■□□□□ 0.31
PRKD1-202ENST00000415220 SMTNL1A8MU46 457 aa16.97■□□□□ 0.31
PRKD1-202ENST00000415220 TMC6Q7Z403 805 aa16.97■□□□□ 0.31
PRKD1-202ENST00000415220 MIGA1Q8NAN2 632 aa16.97■□□□□ 0.31
PRKD1-202ENST00000415220 CHMP4CQ96CF2 233 aa16.97■□□□□ 0.31
PRKD1-202ENST00000415220 ARAP2Q8WZ64 1704 aa16.97■□□□□ 0.31
PRKD1-202ENST00000415220 GSG1L2A8MUP6 293 aa16.97■□□□□ 0.31
PRKD1-202ENST00000415220 KCNJ14Q9UNX9 436 aa16.97■□□□□ 0.31
PRKD1-202ENST00000415220 IARSP41252 1262 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms