RNA–Protein interactions for RNA: ENST00000413023.1

HMGN1P34-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 34, humanhuman

BASIC

Gene HMGN1P34, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P34-201ENST00000413023 CTR9Q6PD62 1173 aa10.21□□□□□ -0.77
HMGN1P34-201ENST00000413023 ZNF804AQ7Z570 1209 aa10.21□□□□□ -0.77
HMGN1P34-201ENST00000413023 RAB11FIP4Q86YS3 637 aa10.21□□□□□ -0.77
HMGN1P34-201ENST00000413023 STK11IPQ8N1F8 1099 aa10.21□□□□□ -0.77
HMGN1P34-201ENST00000413023 MPNDQ8N594 471 aa10.21□□□□□ -0.77
HMGN1P34-201ENST00000413023 SMARCC2Q8TAQ2 1214 aa10.21□□□□□ -0.77
HMGN1P34-201ENST00000413023 WDR66Q8TBY9 1149 aa10.21□□□□□ -0.77
HMGN1P34-201ENST00000413023 ZNF622Q969S3 477 aaKnown RBP eCLIP10.21□□□□□ -0.77
HMGN1P34-201ENST00000413023 ZNF274Q96GC6 653 aaPredicted RBP10.21□□□□□ -0.77
HMGN1P34-201ENST00000413023 MXD3Q9BW11 206 aa10.21□□□□□ -0.77
HMGN1P34-201ENST00000413023 NAPBQ9H115 298 aa10.21□□□□□ -0.77
HMGN1P34-201ENST00000413023 RNF39Q9H2S5 420 aa10.21□□□□□ -0.77
HMGN1P34-201ENST00000413023 NCOA5Q9HCD5 579 aaKnown RBP10.21□□□□□ -0.77
HMGN1P34-201ENST00000413023 AATFQ9NY61 560 aaKnown RBP eCLIP10.21□□□□□ -0.77
HMGN1P34-201ENST00000413023 MKRN1Q9UHC7 482 aaKnown RBP10.21□□□□□ -0.77
HMGN1P34-201ENST00000413023 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.21□□□□□ -0.77
HMGN1P34-201ENST00000413023 ZMYM6O95789 1325 aa10.21□□□□□ -0.78
HMGN1P34-201ENST00000413023 SH2B2O14492 632 aaPredicted RBP10.2□□□□□ -0.78
HMGN1P34-201ENST00000413023 STX6O43752 255 aa10.2□□□□□ -0.78
HMGN1P34-201ENST00000413023 GNAT2P19087 354 aa10.2□□□□□ -0.78
HMGN1P34-201ENST00000413023 KCNA3P22001 575 aa10.2□□□□□ -0.78
HMGN1P34-201ENST00000413023 ALDH1B1P30837 517 aa10.2□□□□□ -0.78
HMGN1P34-201ENST00000413023 MCM5P33992 734 aa10.2□□□□□ -0.78
HMGN1P34-201ENST00000413023 PPP4CP60510 307 aa10.2□□□□□ -0.78
HMGN1P34-201ENST00000413023 PPARAQ07869 468 aa10.2□□□□□ -0.78
HMGN1P34-201ENST00000413023 AKNAD1Q5T1N1 836 aa10.2□□□□□ -0.78
HMGN1P34-201ENST00000413023 MCTP1Q6DN14 999 aa10.2□□□□□ -0.78
HMGN1P34-201ENST00000413023 TMC4Q7Z404 712 aa10.2□□□□□ -0.78
HMGN1P34-201ENST00000413023 CERS5Q8N5B7 392 aa10.2□□□□□ -0.78
HMGN1P34-201ENST00000413023 ANAPC4Q9UJX5 808 aa10.2□□□□□ -0.78
HMGN1P34-201ENST00000413023 FAM205AQ6ZU69 1335 aa10.19□□□□□ -0.78
HMGN1P34-201ENST00000413023 WDR19Q8NEZ3 1342 aa10.19□□□□□ -0.78
HMGN1P34-201ENST00000413023 MINDY4BA8MYZ0 360 aa10.19□□□□□ -0.78
HMGN1P34-201ENST00000413023 USP17L12C9JPN9 530 aa10.19□□□□□ -0.78
HMGN1P34-201ENST00000413023 USP17L21D6R901 530 aa10.19□□□□□ -0.78
HMGN1P34-201ENST00000413023 H0YIN7 160 aa10.19□□□□□ -0.78
HMGN1P34-201ENST00000413023 KDM4AO75164 1064 aa10.19□□□□□ -0.78
HMGN1P34-201ENST00000413023 PRPF40AO75400 957 aaKnown RBP10.19□□□□□ -0.78
HMGN1P34-201ENST00000413023 LDHBP07195 334 aaKnown RBP10.19□□□□□ -0.78
HMGN1P34-201ENST00000413023 FGRP09769 529 aa10.19□□□□□ -0.78
HMGN1P34-201ENST00000413023 ZSCAN22P10073 491 aaPredicted RBP10.19□□□□□ -0.78
HMGN1P34-201ENST00000413023 BAG6P46379 1132 aa10.19□□□□□ -0.78
HMGN1P34-201ENST00000413023 GTF2IP78347 998 aa10.19□□□□□ -0.78
HMGN1P34-201ENST00000413023 FOXD4L6Q3SYB3 417 aaPredicted RBP10.19□□□□□ -0.78
HMGN1P34-201ENST00000413023 SPTY2D1Q68D10 685 aaPredicted RBP10.19□□□□□ -0.78
HMGN1P34-201ENST00000413023 STYK1Q6J9G0 422 aa10.19□□□□□ -0.78
HMGN1P34-201ENST00000413023 FOXD4L3Q6VB84 417 aaPredicted RBP10.19□□□□□ -0.78
HMGN1P34-201ENST00000413023 NSUN7Q8NE18 718 aaKnown RBP10.19□□□□□ -0.78
HMGN1P34-201ENST00000413023 SH3RF3Q8TEJ3 882 aaPredicted RBP10.19□□□□□ -0.78
HMGN1P34-201ENST00000413023 STAG1Q8WVM7 1258 aa10.19□□□□□ -0.78
HMGN1P34-201ENST00000413023 DDX11Q96FC9 970 aa10.19□□□□□ -0.78
HMGN1P34-201ENST00000413023 GBP4Q96PP9 640 aa10.19□□□□□ -0.78
HMGN1P34-201ENST00000413023 DCP1AQ9NPI6 582 aaPredicted RBP10.19□□□□□ -0.78
HMGN1P34-201ENST00000413023 FAM217BQ9NTX9 383 aaPredicted RBP10.19□□□□□ -0.78
HMGN1P34-201ENST00000413023 ZNF219Q9P2Y4 722 aaPredicted RBP10.19□□□□□ -0.78
HMGN1P34-201ENST00000413023 WDR33Q9C0J8 1336 aaKnown RBP10.18□□□□□ -0.78
HMGN1P34-201ENST00000413023 MYH7P12883 1935 aa10.18□□□□□ -0.78
HMGN1P34-201ENST00000413023 KLF18A0A0U1RQI7 1052 aa10.18□□□□□ -0.78
HMGN1P34-201ENST00000413023 F13A1P00488 732 aa10.18□□□□□ -0.78
HMGN1P34-201ENST00000413023 USP17L8P0C7I0 530 aa10.18□□□□□ -0.78
HMGN1P34-201ENST00000413023 TDO2P48775 406 aa10.18□□□□□ -0.78
HMGN1P34-201ENST00000413023 LARP1BQ659C4 914 aaKnown RBP10.18□□□□□ -0.78
HMGN1P34-201ENST00000413023 MFSD6Q6ZSS7 791 aa10.18□□□□□ -0.78
HMGN1P34-201ENST00000413023 ZKSCAN3Q9BRR0 538 aa10.18□□□□□ -0.78
HMGN1P34-201ENST00000413023 RTFDC1Q9BY42 306 aaPredicted RBP10.18□□□□□ -0.78
HMGN1P34-201ENST00000413023 LY9Q9HBG7 655 aa10.18□□□□□ -0.78
HMGN1P34-201ENST00000413023 LAMA4Q16363 1823 aa10.18□□□□□ -0.78
HMGN1P34-201ENST00000413023 LTBP1Q14766 1721 aa10.18□□□□□ -0.78
HMGN1P34-201ENST00000413023 DUOX1Q9NRD9 1551 aa10.18□□□□□ -0.78
HMGN1P34-201ENST00000413023 GPR75-ASB3A0A0A6YYF3 556 aa10.17□□□□□ -0.78
HMGN1P34-201ENST00000413023 GADD45BO75293 160 aaPredicted RBP10.17□□□□□ -0.78
HMGN1P34-201ENST00000413023 CDC27P30260 824 aa10.17□□□□□ -0.78
HMGN1P34-201ENST00000413023 RHBDL3P58872 404 aa10.17□□□□□ -0.78
HMGN1P34-201ENST00000413023 FGD1P98174 961 aa10.17□□□□□ -0.78
HMGN1P34-201ENST00000413023 GSE1Q14687 1217 aa10.17□□□□□ -0.78
HMGN1P34-201ENST00000413023 SEC23AQ15436 765 aa10.17□□□□□ -0.78
HMGN1P34-201ENST00000413023 FAM173BQ6P4H8 233 aa10.17□□□□□ -0.78
HMGN1P34-201ENST00000413023 DPP8Q6V1X1 898 aaPredicted RBP10.17□□□□□ -0.78
HMGN1P34-201ENST00000413023 CDC37L1Q7L3B6 337 aa10.17□□□□□ -0.78
HMGN1P34-201ENST00000413023 RALYLQ86SE5 291 aaKnown RBP10.17□□□□□ -0.78
HMGN1P34-201ENST00000413023 FAM163AQ96GL9 167 aaPredicted RBP10.17□□□□□ -0.78
HMGN1P34-201ENST00000413023 LLPHQ9BRT6 129 aaKnown RBP10.17□□□□□ -0.78
HMGN1P34-201ENST00000413023 NACAP1Q9BZK3 213 aa10.17□□□□□ -0.78
HMGN1P34-201ENST00000413023 COA1Q9GZY4 146 aa10.17□□□□□ -0.78
HMGN1P34-201ENST00000413023 CNPY2Q9Y2B0 182 aa10.17□□□□□ -0.78
HMGN1P34-201ENST00000413023 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.17□□□□□ -0.78
HMGN1P34-201ENST00000413023 RGPD3A6NKT7 1758 aaPredicted RBP10.16□□□□□ -0.78
HMGN1P34-201ENST00000413023 RGPD4Q7Z3J3 1758 aa10.16□□□□□ -0.78
HMGN1P34-201ENST00000413023 PTPDC1A2A3K4 754 aa10.16□□□□□ -0.78
HMGN1P34-201ENST00000413023 PRDM1O75626 825 aa10.16□□□□□ -0.78
HMGN1P34-201ENST00000413023 DPEP1P16444 411 aa10.16□□□□□ -0.78
HMGN1P34-201ENST00000413023 RXRAP19793 462 aa10.16□□□□□ -0.78
HMGN1P34-201ENST00000413023 ADD1P35611 737 aaKnown RBP10.16□□□□□ -0.78
HMGN1P34-201ENST00000413023 DEKP35659 375 aaKnown RBP10.16□□□□□ -0.78
HMGN1P34-201ENST00000413023 SF3B2Q13435 895 aaKnown RBP10.16□□□□□ -0.78
HMGN1P34-201ENST00000413023 SBK1Q52WX2 424 aa10.16□□□□□ -0.78
HMGN1P34-201ENST00000413023 RRP12Q5JTH9 1297 aaKnown RBP10.16□□□□□ -0.78
HMGN1P34-201ENST00000413023 MFSD14BQ5SR56 506 aa10.16□□□□□ -0.78
HMGN1P34-201ENST00000413023 C12orf60Q5U649 245 aa10.16□□□□□ -0.78
HMGN1P34-201ENST00000413023 GIMAP6Q6P9H5 292 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms