RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 AATFQ9NY61 560 aaKnown RBP eCLIP24.86■■□□□ 1.57
C4orf48-202ENST00000409860 MAGEB6P1A0A0J9YX57 407 aa24.85■■□□□ 1.57
C4orf48-202ENST00000409860 CHGBP05060 677 aa24.85■■□□□ 1.57
C4orf48-202ENST00000409860 PLCG2P16885 1265 aa24.85■■□□□ 1.57
C4orf48-202ENST00000409860 HIRAP54198 1017 aaPredicted RBP24.85■■□□□ 1.57
C4orf48-202ENST00000409860 SLFNL1Q499Z3 407 aa24.85■■□□□ 1.57
C4orf48-202ENST00000409860 TMOD2Q9NZR1 351 aa24.85■■□□□ 1.57
C4orf48-202ENST00000409860 MYO5AQ9Y4I1 1855 aaKnown RBP24.84■■□□□ 1.57
C4orf48-202ENST00000409860 PPP4CP60510 307 aa24.84■■□□□ 1.57
C4orf48-202ENST00000409860 ZMYM1Q5SVZ6 1142 aa24.84■■□□□ 1.57
C4orf48-202ENST00000409860 TDRD3Q9H7E2 651 aaKnown RBP24.84■■□□□ 1.57
C4orf48-202ENST00000409860 USP40Q9NVE5 1235 aa24.84■■□□□ 1.57
C4orf48-202ENST00000409860 SPDYE2Q495Y8 402 aa24.83■■□□□ 1.57
C4orf48-202ENST00000409860 CDC42EP5Q6NZY7 148 aa24.83■■□□□ 1.57
C4orf48-202ENST00000409860 ZC3H15Q8WU90 426 aaKnown RBP24.83■■□□□ 1.57
C4orf48-202ENST00000409860 AIDAQ96BJ3 306 aa24.83■■□□□ 1.57
C4orf48-202ENST00000409860 MYH2Q9UKX2 1941 aa24.82■■□□□ 1.56
C4orf48-202ENST00000409860 CLRN2A0PK11 232 aa24.82■■□□□ 1.56
C4orf48-202ENST00000409860 MBD4O95243 580 aa24.82■■□□□ 1.56
C4orf48-202ENST00000409860 NMIQ13287 307 aaPredicted RBP24.82■■□□□ 1.56
C4orf48-202ENST00000409860 ZNF784Q8NCA9 323 aaPredicted RBP24.82■■□□□ 1.56
C4orf48-202ENST00000409860 OSBP2Q969R2 916 aa24.82■■□□□ 1.56
C4orf48-202ENST00000409860 PUS7LQ9H0K6 701 aaKnown RBP24.82■■□□□ 1.56
C4orf48-202ENST00000409860 HELLSQ9NRZ9 838 aa24.82■■□□□ 1.56
C4orf48-202ENST00000409860 GGA3Q9NZ52 723 aa24.82■■□□□ 1.56
C4orf48-202ENST00000409860 ZNF70Q9UC06 446 aaPredicted RBP24.82■■□□□ 1.56
C4orf48-202ENST00000409860 ADAMTSL1Q8N6G6 1762 aa24.82■■□□□ 1.56
C4orf48-202ENST00000409860 DYNLL1P63167 89 aaKnown RBP24.81■■□□□ 1.56
C4orf48-202ENST00000409860 RIOK1Q9BRS2 568 aaKnown RBP24.81■■□□□ 1.56
C4orf48-202ENST00000409860 VEZTQ9HBM0 779 aa24.81■■□□□ 1.56
C4orf48-202ENST00000409860 CLEC11AQ9Y240 323 aa24.81■■□□□ 1.56
C4orf48-202ENST00000409860 CDC45O75419 566 aa24.8■■□□□ 1.56
C4orf48-202ENST00000409860 CHMLP26374 656 aa24.8■■□□□ 1.56
C4orf48-202ENST00000409860 RHBDL3P58872 404 aa24.8■■□□□ 1.56
C4orf48-202ENST00000409860 ANGEL2Q5VTE6 544 aaKnown RBP24.8■■□□□ 1.56
C4orf48-202ENST00000409860 CASC1Q6TDU7 716 aa24.8■■□□□ 1.56
C4orf48-202ENST00000409860 LDHDQ86WU2 507 aa24.8■■□□□ 1.56
C4orf48-202ENST00000409860 TEX11Q8IYF3 940 aa24.8■■□□□ 1.56
C4orf48-202ENST00000409860 SH3RF3Q8TEJ3 882 aaPredicted RBP24.8■■□□□ 1.56
C4orf48-202ENST00000409860 FAM227BQ96M60 508 aa24.8■■□□□ 1.56
C4orf48-202ENST00000409860 MYH7P12883 1935 aa24.8■■□□□ 1.56
C4orf48-202ENST00000409860 ASTN2O75129 1339 aaPredicted RBP24.8■■□□□ 1.56
C4orf48-202ENST00000409860 A0A0D9SFI3 127 aa24.79■■□□□ 1.56
C4orf48-202ENST00000409860 M0R2C6 588 aa24.79■■□□□ 1.56
C4orf48-202ENST00000409860 MCMDC2Q4G0Z9 681 aa24.79■■□□□ 1.56
C4orf48-202ENST00000409860 CWC27Q6UX04 472 aaKnown RBP24.79■■□□□ 1.56
C4orf48-202ENST00000409860 APOBEC3FQ8IUX4 373 aaKnown RBP24.79■■□□□ 1.56
C4orf48-202ENST00000409860 LCORLQ8N3X6 602 aa24.79■■□□□ 1.56
C4orf48-202ENST00000409860 RUFY2Q8WXA3 655 aa24.79■■□□□ 1.56
C4orf48-202ENST00000409860 DCPSQ96C86 337 aaKnown RBP24.79■■□□□ 1.56
C4orf48-202ENST00000409860 CRNKL1Q9BZJ0 848 aaKnown RBP24.79■■□□□ 1.56
C4orf48-202ENST00000409860 ARMT1Q9H993 441 aa24.79■■□□□ 1.56
C4orf48-202ENST00000409860 PITPNM2Q9BZ72 1349 aa24.79■■□□□ 1.56
C4orf48-202ENST00000409860 GPAA1O43292 621 aa24.78■■□□□ 1.56
C4orf48-202ENST00000409860 TNFAIP1Q13829 316 aa24.78■■□□□ 1.56
C4orf48-202ENST00000409860 SEC62Q99442 399 aaKnown RBP24.78■■□□□ 1.56
C4orf48-202ENST00000409860 PGAP2Q9UHJ9 254 aa24.78■■□□□ 1.56
C4orf48-202ENST00000409860 AK9Q5TCS8 1911 aa24.78■■□□□ 1.56
C4orf48-202ENST00000409860 KIF3CO14782 793 aa24.77■■□□□ 1.56
C4orf48-202ENST00000409860 POTEIP0CG38 1075 aa24.77■■□□□ 1.56
C4orf48-202ENST00000409860 POTEJP0CG39 1038 aa24.77■■□□□ 1.56
C4orf48-202ENST00000409860 CACNB3P54284 484 aa24.77■■□□□ 1.56
C4orf48-202ENST00000409860 FKBP1CQ5VVH2 108 aa24.77■■□□□ 1.56
C4orf48-202ENST00000409860 RAD50Q92878 1312 aa24.77■■□□□ 1.56
C4orf48-202ENST00000409860 WDHD1O75717 1129 aaPredicted RBP24.76■■□□□ 1.55
C4orf48-202ENST00000409860 TNNI2P48788 182 aa24.76■■□□□ 1.55
C4orf48-202ENST00000409860 MFAP1P55081 439 aaKnown RBP24.76■■□□□ 1.55
C4orf48-202ENST00000409860 SULF1Q8IWU6 871 aa24.76■■□□□ 1.55
C4orf48-202ENST00000409860 STRBPQ96SI9 672 aaKnown RBP24.76■■□□□ 1.55
C4orf48-202ENST00000409860 IDI2Q9BXS1 227 aa24.76■■□□□ 1.55
C4orf48-202ENST00000409860 TCP10L2B9ZVM9 353 aa24.75■■□□□ 1.55
C4orf48-202ENST00000409860 GNAT2P19087 354 aa24.75■■□□□ 1.55
C4orf48-202ENST00000409860 USP5P45974 858 aa24.75■■□□□ 1.55
C4orf48-202ENST00000409860 NFIAQ12857 509 aa24.74■■□□□ 1.55
C4orf48-202ENST00000409860 PICALMQ13492 652 aa24.74■■□□□ 1.55
C4orf48-202ENST00000409860 CCDC129Q6ZRS4 1044 aa24.74■■□□□ 1.55
C4orf48-202ENST00000409860 TGFBRAP1Q8WUH2 860 aa24.74■■□□□ 1.55
C4orf48-202ENST00000409860 SLC4A4Q9Y6R1 1079 aa24.74■■□□□ 1.55
C4orf48-202ENST00000409860 CCDC171Q6TFL3 1326 aa24.74■■□□□ 1.55
C4orf48-202ENST00000409860 ENTPD3O75355 529 aa24.73■■□□□ 1.55
C4orf48-202ENST00000409860 NPM3O75607 178 aaKnown RBP24.73■■□□□ 1.55
C4orf48-202ENST00000409860 CHADLQ6NUI6 762 aa24.73■■□□□ 1.55
C4orf48-202ENST00000409860 KRT26Q7Z3Y9 468 aa24.73■■□□□ 1.55
C4orf48-202ENST00000409860 FAM83AQ86UY5 434 aa24.73■■□□□ 1.55
C4orf48-202ENST00000409860 DDRGK1Q96HY6 314 aa24.73■■□□□ 1.55
C4orf48-202ENST00000409860 FLT1P17948 1338 aa24.72■■□□□ 1.55
C4orf48-202ENST00000409860 MAP1SQ66K74 1059 aaPredicted RBP24.72■■□□□ 1.55
C4orf48-202ENST00000409860 CDC37L1Q7L3B6 337 aa24.72■■□□□ 1.55
C4orf48-202ENST00000409860 ZNF589Q86UQ0 364 aaPredicted RBP24.72■■□□□ 1.55
C4orf48-202ENST00000409860 MAPKAPK5Q8IW41 473 aa24.72■■□□□ 1.55
C4orf48-202ENST00000409860 DDX4Q9NQI0 724 aaKnown RBP24.72■■□□□ 1.55
C4orf48-202ENST00000409860 FAM198AQ9UFP1 575 aa24.72■■□□□ 1.55
C4orf48-202ENST00000409860 PPP2R3BQ9Y5P8 575 aa24.72■■□□□ 1.55
C4orf48-202ENST00000409860 RPAP1Q9BWH6 1393 aaPredicted RBP24.71■■□□□ 1.55
C4orf48-202ENST00000409860 PRKAB2O43741 272 aa24.71■■□□□ 1.55
C4orf48-202ENST00000409860 TCP10Q12799 353 aa24.71■■□□□ 1.55
C4orf48-202ENST00000409860 RASA3Q14644 834 aa24.71■■□□□ 1.55
C4orf48-202ENST00000409860 SDR42E1Q8WUS8 393 aa24.71■■□□□ 1.55
C4orf48-202ENST00000409860 DEFB129Q9H1M3 183 aa24.71■■□□□ 1.55
C4orf48-202ENST00000409860 ATP8A2Q9NTI2 1148 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms