RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 HCN2Q9UL51 889 aa8.7□□□□□ -1.02
LSM5-203ENST00000409782 TBX22Q9Y458 520 aa8.7□□□□□ -1.02
LSM5-203ENST00000409782 CHD2O14647 1828 aaKnown RBP8.7□□□□□ -1.02
LSM5-203ENST00000409782 TMEM94Q12767 1356 aa8.7□□□□□ -1.02
LSM5-203ENST00000409782 CCDC144AA2RUR9 1427 aa8.7□□□□□ -1.02
LSM5-203ENST00000409782 NCOA3Q9Y6Q9 1424 aa8.7□□□□□ -1.02
LSM5-203ENST00000409782 XRN1Q8IZH2 1706 aaKnown RBP8.69□□□□□ -1.02
LSM5-203ENST00000409782 ADH6P28332 368 aa8.69□□□□□ -1.02
LSM5-203ENST00000409782 INPP5BP32019 993 aa8.69□□□□□ -1.02
LSM5-203ENST00000409782 GJA8P48165 433 aa8.69□□□□□ -1.02
LSM5-203ENST00000409782 ZNF468Q5VIY5 522 aaPredicted RBP8.69□□□□□ -1.02
LSM5-203ENST00000409782 ZNF385CQ66K41 422 aaPredicted RBP8.69□□□□□ -1.02
LSM5-203ENST00000409782 GIMAP6Q6P9H5 292 aa8.69□□□□□ -1.02
LSM5-203ENST00000409782 WHAMMQ8TF30 809 aa8.69□□□□□ -1.02
LSM5-203ENST00000409782 SRA1Q9HD15 236 aaKnown RBP8.69□□□□□ -1.02
LSM5-203ENST00000409782 LRRC4BQ9NT99 713 aa8.69□□□□□ -1.02
LSM5-203ENST00000409782 FAM8A1Q9UBU6 413 aa8.69□□□□□ -1.02
LSM5-203ENST00000409782 STK17AQ9UEE5 414 aa8.69□□□□□ -1.02
LSM5-203ENST00000409782 INPP5FQ9Y2H2 1132 aa8.69□□□□□ -1.02
LSM5-203ENST00000409782 CELA2BP08218 269 aaPredicted RBP8.68□□□□□ -1.02
LSM5-203ENST00000409782 LORP23490 312 aaPredicted RBP8.68□□□□□ -1.02
LSM5-203ENST00000409782 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.68□□□□□ -1.02
LSM5-203ENST00000409782 LYPD4Q6UWN0 246 aa8.68□□□□□ -1.02
LSM5-203ENST00000409782 USP48Q86UV5 1035 aa8.68□□□□□ -1.02
LSM5-203ENST00000409782 HIRIP3Q9BW71 556 aaPredicted RBP8.68□□□□□ -1.02
LSM5-203ENST00000409782 GGA1Q9UJY5 639 aa8.68□□□□□ -1.02
LSM5-203ENST00000409782 FNDC3AQ9Y2H6 1198 aaKnown RBP8.68□□□□□ -1.02
LSM5-203ENST00000409782 RAB3GAP2Q9H2M9 1393 aa8.68□□□□□ -1.02
LSM5-203ENST00000409782 NEURL1BA8MQ27 555 aa8.67□□□□□ -1.02
LSM5-203ENST00000409782 PPLO60437 1756 aa8.67□□□□□ -1.02
LSM5-203ENST00000409782 TNFRSF21O75509 655 aa8.67□□□□□ -1.02
LSM5-203ENST00000409782 TNNI2P48788 182 aa8.67□□□□□ -1.02
LSM5-203ENST00000409782 MSH6P52701 1360 aa8.67□□□□□ -1.02
LSM5-203ENST00000409782 RACK1P63244 317 aaKnown RBP8.67□□□□□ -1.02
LSM5-203ENST00000409782 C8orf34Q49A92 452 aa8.67□□□□□ -1.02
LSM5-203ENST00000409782 RPGRIP1LQ68CZ1 1315 aa8.67□□□□□ -1.02
LSM5-203ENST00000409782 VPS37DQ86XT2 251 aa8.67□□□□□ -1.02
LSM5-203ENST00000409782 PRAG1Q86YV5 1406 aa8.67□□□□□ -1.02
LSM5-203ENST00000409782 CCDC74AQ96AQ1 378 aa8.67□□□□□ -1.02
LSM5-203ENST00000409782 PNMA5Q96PV4 448 aa8.67□□□□□ -1.02
LSM5-203ENST00000409782 DNAJC2Q99543 621 aaKnown RBP8.67□□□□□ -1.02
LSM5-203ENST00000409782 MPHOSPH9Q99550 1183 aa8.67□□□□□ -1.02
LSM5-203ENST00000409782 SLC30A3Q99726 388 aa8.67□□□□□ -1.02
LSM5-203ENST00000409782 EFCC1Q9HA90 598 aa8.67□□□□□ -1.02
LSM5-203ENST00000409782 C11orf16Q9NQ32 467 aa8.67□□□□□ -1.02
LSM5-203ENST00000409782 TMA7Q9Y2S6 64 aaKnown RBP8.67□□□□□ -1.02
LSM5-203ENST00000409782 SPATA31E1Q6ZUB1 1445 aa8.66□□□□□ -1.02
LSM5-203ENST00000409782 OIP5O43482 229 aa8.66□□□□□ -1.02
LSM5-203ENST00000409782 PCBP4P57723 403 aaKnown RBP8.66□□□□□ -1.02
LSM5-203ENST00000409782 PIP4K2BP78356 416 aa8.66□□□□□ -1.02
LSM5-203ENST00000409782 CCINQ13939 588 aa8.66□□□□□ -1.02
LSM5-203ENST00000409782 GRIN2CQ14957 1233 aa8.66□□□□□ -1.02
LSM5-203ENST00000409782 TAF1CQ15572 869 aaPredicted RBP8.66□□□□□ -1.02
LSM5-203ENST00000409782 SLCO4C1Q6ZQN7 724 aa8.66□□□□□ -1.02
LSM5-203ENST00000409782 ERMP1Q7Z2K6 904 aa8.66□□□□□ -1.02
LSM5-203ENST00000409782 SYT9Q86SS6 491 aa8.66□□□□□ -1.02
LSM5-203ENST00000409782 GALNT6Q8NCL4 622 aa8.66□□□□□ -1.02
LSM5-203ENST00000409782 DHX38Q92620 1227 aaKnown RBP8.66□□□□□ -1.02
LSM5-203ENST00000409782 RTCBQ9Y3I0 505 aaKnown RBP8.66□□□□□ -1.02
LSM5-203ENST00000409782 SETD1AO15047 1707 aaKnown RBP8.66□□□□□ -1.02
LSM5-203ENST00000409782 DCCP43146 1447 aa8.65□□□□□ -1.02
LSM5-203ENST00000409782 PTCH1Q13635 1447 aa8.65□□□□□ -1.02
LSM5-203ENST00000409782 FAM135BQ49AJ0 1406 aa8.65□□□□□ -1.02
LSM5-203ENST00000409782 PTPRUQ92729 1446 aa8.65□□□□□ -1.02
LSM5-203ENST00000409782 FGRP09769 529 aa8.65□□□□□ -1.02
LSM5-203ENST00000409782 DNAJA1P31689 397 aaKnown RBP8.65□□□□□ -1.02
LSM5-203ENST00000409782 GTF2F1P35269 517 aaKnown RBP eCLIP8.65□□□□□ -1.02
LSM5-203ENST00000409782 ZNF394Q53GI3 561 aa8.65□□□□□ -1.02
LSM5-203ENST00000409782 CMTR1Q8N1G2 835 aaKnown RBP8.65□□□□□ -1.02
LSM5-203ENST00000409782 BHMTQ93088 406 aa8.65□□□□□ -1.02
LSM5-203ENST00000409782 OSBPL7Q9BZF2 842 aa8.65□□□□□ -1.02
LSM5-203ENST00000409782 ZFYVE28Q9HCC9 887 aa8.65□□□□□ -1.02
LSM5-203ENST00000409782 IFT172Q9UG01 1749 aa8.65□□□□□ -1.03
LSM5-203ENST00000409782 ANKRD30BQ9BXX2 1392 aa8.64□□□□□ -1.03
LSM5-203ENST00000409782 RAB44Q7Z6P3 723 aaPredicted RBP8.64□□□□□ -1.03
LSM5-203ENST00000409782 NEDD1Q8NHV4 660 aa8.64□□□□□ -1.03
LSM5-203ENST00000409782 EDARADDQ8WWZ3 215 aa8.64□□□□□ -1.03
LSM5-203ENST00000409782 GSX2Q9BZM3 304 aa8.64□□□□□ -1.03
LSM5-203ENST00000409782 GGT7Q9UJ14 662 aa8.64□□□□□ -1.03
LSM5-203ENST00000409782 METP08581 1390 aa8.63□□□□□ -1.03
LSM5-203ENST00000409782 SIN3BO75182 1162 aa8.63□□□□□ -1.03
LSM5-203ENST00000409782 HSPA1LP34931 641 aa8.63□□□□□ -1.03
LSM5-203ENST00000409782 CCDC144BQ3MJ40 725 aa8.63□□□□□ -1.03
LSM5-203ENST00000409782 RASGRP4Q8TDF6 673 aa8.63□□□□□ -1.03
LSM5-203ENST00000409782 ANKRD24Q8TF21 1146 aa8.63□□□□□ -1.03
LSM5-203ENST00000409782 NOC4LQ9BVI4 516 aaKnown RBP8.63□□□□□ -1.03
LSM5-203ENST00000409782 PCDHGB7Q9Y5F8 929 aa8.63□□□□□ -1.03
LSM5-203ENST00000409782 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.63□□□□□ -1.03
LSM5-203ENST00000409782 MYOM2P54296 1465 aa8.63□□□□□ -1.03
LSM5-203ENST00000409782 ROBO1Q9Y6N7 1651 aa8.62□□□□□ -1.03
LSM5-203ENST00000409782 MED1Q15648 1581 aaPredicted RBP8.62□□□□□ -1.03
LSM5-203ENST00000409782 TLDC2A0PJX2 215 aa8.62□□□□□ -1.03
LSM5-203ENST00000409782 A6NHS1 94 aa8.62□□□□□ -1.03
LSM5-203ENST00000409782 XYLBO75191 536 aa8.62□□□□□ -1.03
LSM5-203ENST00000409782 ARHGEF15O94989 841 aa8.62□□□□□ -1.03
LSM5-203ENST00000409782 EPXP11678 715 aa8.62□□□□□ -1.03
LSM5-203ENST00000409782 ALAS2P22557 587 aa8.62□□□□□ -1.03
LSM5-203ENST00000409782 AMPD1P23109 780 aa8.62□□□□□ -1.03
LSM5-203ENST00000409782 ZNF438Q7Z4V0 828 aa8.62□□□□□ -1.03
LSM5-203ENST00000409782 MCF2L2Q86YR7 1114 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms