RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 INTS4Q96HW7 963 aaKnown RBP28.27■■■□□ 2.12
SPIRE1-202ENST00000409402 ADGRL2O95490 1459 aa28.27■■■□□ 2.12
SPIRE1-202ENST00000409402 VWA3AA6NCI4 1184 aa28.27■■■□□ 2.12
SPIRE1-202ENST00000409402 CEP135Q66GS9 1140 aa28.27■■■□□ 2.12
SPIRE1-202ENST00000409402 DKC1O60832 514 aaKnown RBP eCLIP28.27■■■□□ 2.12
SPIRE1-202ENST00000409402 RILPL1Q5EBL4 403 aa28.27■■■□□ 2.12
SPIRE1-202ENST00000409402 BEGAINQ9BUH8 593 aa28.27■■■□□ 2.12
SPIRE1-202ENST00000409402 EIF4A1P60842 406 aaKnown RBP28.27■■■□□ 2.12
SPIRE1-202ENST00000409402 KRT83P78385 493 aa28.27■■■□□ 2.12
SPIRE1-202ENST00000409402 HAUS3Q68CZ6 603 aa28.27■■■□□ 2.12
SPIRE1-202ENST00000409402 GJC1P36383 396 aa28.26■■■□□ 2.12
SPIRE1-202ENST00000409402 SMTNP53814 917 aa28.26■■■□□ 2.12
SPIRE1-202ENST00000409402 DHX37Q8IY37 1157 aaKnown RBP28.26■■■□□ 2.12
SPIRE1-202ENST00000409402 FRMD4BQ9Y2L6 1034 aa28.26■■■□□ 2.12
SPIRE1-202ENST00000409402 PTGS1P23219 599 aa28.26■■■□□ 2.11
SPIRE1-202ENST00000409402 SLC1A4P43007 532 aa28.26■■■□□ 2.11
SPIRE1-202ENST00000409402 UBXN1Q04323 297 aa28.26■■■□□ 2.11
SPIRE1-202ENST00000409402 CTR9Q6PD62 1173 aa28.26■■■□□ 2.11
SPIRE1-202ENST00000409402 PER1O15534 1290 aaPredicted RBP28.25■■■□□ 2.11
SPIRE1-202ENST00000409402 CHMP2AO43633 222 aa28.25■■■□□ 2.11
SPIRE1-202ENST00000409402 ABCA5Q8WWZ7 1642 aa28.25■■■□□ 2.11
SPIRE1-202ENST00000409402 USP26Q9BXU7 913 aa28.25■■■□□ 2.11
SPIRE1-202ENST00000409402 ANGEL1Q9UNK9 670 aaKnown RBP28.25■■■□□ 2.11
SPIRE1-202ENST00000409402 H7C1D1 291 aa28.25■■■□□ 2.11
SPIRE1-202ENST00000409402 NOP56O00567 594 aaKnown RBP28.25■■■□□ 2.11
SPIRE1-202ENST00000409402 SLC27A2O14975 620 aa28.25■■■□□ 2.11
SPIRE1-202ENST00000409402 TCIRG1Q13488 830 aa28.25■■■□□ 2.11
SPIRE1-202ENST00000409402 PRKG1Q13976 671 aa28.25■■■□□ 2.11
SPIRE1-202ENST00000409402 FERP16591 822 aa28.25■■■□□ 2.11
SPIRE1-202ENST00000409402 PRDM1O75626 825 aa28.24■■■□□ 2.11
SPIRE1-202ENST00000409402 STX17P56962 302 aa28.24■■■□□ 2.11
SPIRE1-202ENST00000409402 FMNL3Q8IVF7 1028 aa28.24■■■□□ 2.11
SPIRE1-202ENST00000409402 CCDC175P0C221 793 aa28.24■■■□□ 2.11
SPIRE1-202ENST00000409402 PPP1R2P41236 205 aa28.24■■■□□ 2.11
SPIRE1-202ENST00000409402 RPS8P62241 208 aaKnown RBP28.24■■■□□ 2.11
SPIRE1-202ENST00000409402 STK24Q9Y6E0 443 aa28.24■■■□□ 2.11
SPIRE1-202ENST00000409402 TCP10Q12799 353 aa28.24■■■□□ 2.11
SPIRE1-202ENST00000409402 CCDC155Q8N6L0 562 aa28.24■■■□□ 2.11
SPIRE1-202ENST00000409402 KBTBD3Q8NAB2 608 aa28.24■■■□□ 2.11
SPIRE1-202ENST00000409402 CCDC42Q96M95 316 aa28.24■■■□□ 2.11
SPIRE1-202ENST00000409402 PPP1R14CQ8TAE6 165 aa28.24■■■□□ 2.11
SPIRE1-202ENST00000409402 SREK1Q8WXA9 508 aaKnown RBP28.24■■■□□ 2.11
SPIRE1-202ENST00000409402 FNBP1Q96RU3 617 aa28.24■■■□□ 2.11
SPIRE1-202ENST00000409402 LTKP29376 864 aa28.23■■■□□ 2.11
SPIRE1-202ENST00000409402 GRIPAP1Q4V328 841 aa28.23■■■□□ 2.11
SPIRE1-202ENST00000409402 V9GY48 417 aaPredicted RBP28.23■■■□□ 2.11
SPIRE1-202ENST00000409402 MYCLP12524 364 aaPredicted RBP28.23■■■□□ 2.11
SPIRE1-202ENST00000409402 IFT74Q96LB3 600 aa28.23■■■□□ 2.11
SPIRE1-202ENST00000409402 CFAP74Q9C0B2 1584 aa28.23■■■□□ 2.11
SPIRE1-202ENST00000409402 IBTKQ9P2D0 1353 aaPredicted RBP28.23■■■□□ 2.11
SPIRE1-202ENST00000409402 TMEM110-MUSTN1A8MSY1 372 aa28.23■■■□□ 2.11
SPIRE1-202ENST00000409402 CCNT1O60563 726 aaKnown RBP28.23■■■□□ 2.11
SPIRE1-202ENST00000409402 PIK3AP1Q6ZUJ8 805 aa28.23■■■□□ 2.11
SPIRE1-202ENST00000409402 SKILP12757 684 aa28.22■■■□□ 2.11
SPIRE1-202ENST00000409402 SYT1P21579 422 aa28.22■■■□□ 2.11
SPIRE1-202ENST00000409402 MAPKAPK5Q8IW41 473 aa28.22■■■□□ 2.11
SPIRE1-202ENST00000409402 PHKG2P15735 406 aa28.22■■■□□ 2.11
SPIRE1-202ENST00000409402 MRPS9P82933 396 aaKnown RBP28.22■■■□□ 2.11
SPIRE1-202ENST00000409402 CEP112Q8N8E3 955 aa28.22■■■□□ 2.11
SPIRE1-202ENST00000409402 ZSWIM4Q9H7M6 989 aa28.22■■■□□ 2.11
SPIRE1-202ENST00000409402 TRIM35Q9UPQ4 493 aa28.22■■■□□ 2.11
SPIRE1-202ENST00000409402 PAXBP1Q9Y5B6 917 aa28.22■■■□□ 2.11
SPIRE1-202ENST00000409402 LZTS2Q9BRK4 669 aa28.22■■■□□ 2.11
SPIRE1-202ENST00000409402 KIF5AQ12840 1032 aa28.22■■■□□ 2.11
SPIRE1-202ENST00000409402 PLXNC1O60486 1568 aa28.21■■■□□ 2.11
SPIRE1-202ENST00000409402 DCAF17Q5H9S7 520 aaPredicted RBP28.21■■■□□ 2.11
SPIRE1-202ENST00000409402 ELP1O95163 1332 aa28.21■■■□□ 2.11
SPIRE1-202ENST00000409402 EPB41P11171 864 aaKnown RBP28.21■■■□□ 2.11
SPIRE1-202ENST00000409402 CTSWP56202 376 aa28.21■■■□□ 2.11
SPIRE1-202ENST00000409402 WDR44Q5JSH3 913 aa28.21■■■□□ 2.11
SPIRE1-202ENST00000409402 ERICH4A6NGS2 130 aa28.21■■■□□ 2.11
SPIRE1-202ENST00000409402 GSTA5Q7RTV2 222 aa28.21■■■□□ 2.11
SPIRE1-202ENST00000409402 CCDC169A6NNP5 214 aa28.21■■■□□ 2.11
SPIRE1-202ENST00000409402 ADCY7P51828 1080 aa28.21■■■□□ 2.11
SPIRE1-202ENST00000409402 CCDC50Q8IVM0 306 aa28.21■■■□□ 2.11
SPIRE1-202ENST00000409402 TGFBRAP1Q8WUH2 860 aa28.21■■■□□ 2.11
SPIRE1-202ENST00000409402 BCS1LQ9Y276 419 aa28.21■■■□□ 2.11
SPIRE1-202ENST00000409402 TYRO3Q06418 890 aa28.21■■■□□ 2.11
SPIRE1-202ENST00000409402 MSL1Q68DK7 614 aa28.21■■■□□ 2.11
SPIRE1-202ENST00000409402 MICALCLQ6ZW33 695 aa28.21■■■□□ 2.11
SPIRE1-202ENST00000409402 CCDC117Q8IWD4 279 aaPredicted RBP28.21■■■□□ 2.11
SPIRE1-202ENST00000409402 OTUD6BQ8N6M0 293 aa28.21■■■□□ 2.11
SPIRE1-202ENST00000409402 HARSP12081 509 aaKnown RBP28.2■■■□□ 2.11
SPIRE1-202ENST00000409402 BIRC3Q13489 604 aa28.2■■■□□ 2.11
SPIRE1-202ENST00000409402 KRT86O43790 486 aa28.2■■■□□ 2.1
SPIRE1-202ENST00000409402 ZNF532Q9HCE3 1301 aa28.2■■■□□ 2.1
SPIRE1-202ENST00000409402 CTAGE15A4D2H0 777 aa28.2■■■□□ 2.1
SPIRE1-202ENST00000409402 CTAGE8P0CG41 777 aa28.2■■■□□ 2.1
SPIRE1-202ENST00000409402 TNFAIP1Q13829 316 aa28.2■■■□□ 2.1
SPIRE1-202ENST00000409402 CTAGE6Q86UF2 777 aa28.2■■■□□ 2.1
SPIRE1-202ENST00000409402 CTAGE4Q8IX94 777 aa28.2■■■□□ 2.1
SPIRE1-202ENST00000409402 PPP2R5BQ15173 497 aa28.19■■■□□ 2.1
SPIRE1-202ENST00000409402 EAPPQ56P03 285 aaPredicted RBP28.19■■■□□ 2.1
SPIRE1-202ENST00000409402 HSF2BPO75031 334 aa28.19■■■□□ 2.1
SPIRE1-202ENST00000409402 ZAP70P43403 619 aa28.19■■■□□ 2.1
SPIRE1-202ENST00000409402 C8orf34Q49A92 452 aa28.19■■■□□ 2.1
SPIRE1-202ENST00000409402 CALRP27797 417 aaKnown RBP28.19■■■□□ 2.1
SPIRE1-202ENST00000409402 IRX3P78415 501 aaPredicted RBP28.19■■■□□ 2.1
SPIRE1-202ENST00000409402 CTDSPL2Q05D32 466 aa28.19■■■□□ 2.1
SPIRE1-202ENST00000409402 STRN3Q13033 797 aa28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms