RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 GSG1L2A8MUP6 293 aa22.6■■□□□ 1.21
TSPAN4-204ENST00000397404 BLOC1S2Q6QNY1 142 aa22.6■■□□□ 1.21
TSPAN4-204ENST00000397404 RUFY3Q7L099 469 aa22.6■■□□□ 1.21
TSPAN4-204ENST00000397404 ADGRA1Q86SQ6 560 aa22.6■■□□□ 1.21
TSPAN4-204ENST00000397404 MIGA1Q8NAN2 632 aa22.6■■□□□ 1.21
TSPAN4-204ENST00000397404 FOXP2O15409 715 aa22.6■■□□□ 1.21
TSPAN4-204ENST00000397404 CASTP20810 708 aaKnown RBP22.6■■□□□ 1.21
TSPAN4-204ENST00000397404 TDO2P48775 406 aa22.6■■□□□ 1.21
TSPAN4-204ENST00000397404 TRDNQ13061 729 aa22.6■■□□□ 1.21
TSPAN4-204ENST00000397404 AMOTL1Q8IY63 956 aa22.6■■□□□ 1.21
TSPAN4-204ENST00000397404 TEKT1Q969V4 418 aa22.6■■□□□ 1.21
TSPAN4-204ENST00000397404 JAKMIP1Q96N16 626 aaKnown RBP22.6■■□□□ 1.21
TSPAN4-204ENST00000397404 NEK1Q96PY6 1258 aa22.6■■□□□ 1.21
TSPAN4-204ENST00000397404 RNF41Q9H4P4 317 aaPredicted RBP22.6■■□□□ 1.21
TSPAN4-204ENST00000397404 CNNM2Q9H8M5 875 aa22.6■■□□□ 1.21
TSPAN4-204ENST00000397404 MYH2Q9UKX2 1941 aa22.59■■□□□ 1.21
TSPAN4-204ENST00000397404 LAMA4Q16363 1823 aa22.59■■□□□ 1.21
TSPAN4-204ENST00000397404 WDR19Q8NEZ3 1342 aa22.59■■□□□ 1.21
TSPAN4-204ENST00000397404 K7ELQ4 463 aaPredicted RBP22.59■■□□□ 1.21
TSPAN4-204ENST00000397404 FBXW7Q969H0 707 aa22.59■■□□□ 1.21
TSPAN4-204ENST00000397404 TBC1D2Q9BYX2 928 aa22.59■■□□□ 1.21
TSPAN4-204ENST00000397404 AATFQ9NY61 560 aaKnown RBP eCLIP22.59■■□□□ 1.21
TSPAN4-204ENST00000397404 ARPP21Q9UBL0 812 aaPredicted RBP22.59■■□□□ 1.21
TSPAN4-204ENST00000397404 ANAPC4Q9UJX5 808 aa22.59■■□□□ 1.21
TSPAN4-204ENST00000397404 SERPINA10Q9UK55 444 aa22.59■■□□□ 1.21
TSPAN4-204ENST00000397404 TAOK2Q9UL54 1235 aa22.59■■□□□ 1.21
TSPAN4-204ENST00000397404 TTF2Q9UNY4 1162 aaKnown RBP22.59■■□□□ 1.21
TSPAN4-204ENST00000397404 JAG2Q9Y219 1238 aa22.59■■□□□ 1.21
TSPAN4-204ENST00000397404 FBXL16Q8N461 479 aa22.58■■□□□ 1.2
TSPAN4-204ENST00000397404 ZNF277Q9NRM2 450 aaPredicted RBP22.58■■□□□ 1.2
TSPAN4-204ENST00000397404 SLC3A2P08195 630 aaKnown RBP22.57■■□□□ 1.2
TSPAN4-204ENST00000397404 VIL1P09327 827 aaKnown RBP22.57■■□□□ 1.2
TSPAN4-204ENST00000397404 SBK1Q52WX2 424 aa22.57■■□□□ 1.2
TSPAN4-204ENST00000397404 AGBL3Q8NEM8 1001 aa22.57■■□□□ 1.2
TSPAN4-204ENST00000397404 MTA3Q9BTC8 594 aa22.57■■□□□ 1.2
TSPAN4-204ENST00000397404 TNIP1Q15025 636 aa22.56■■□□□ 1.2
TSPAN4-204ENST00000397404 NCOA7Q8NI08 942 aa22.56■■□□□ 1.2
TSPAN4-204ENST00000397404 CHMP4CQ96CF2 233 aa22.56■■□□□ 1.2
TSPAN4-204ENST00000397404 FHDC1Q9C0D6 1143 aaPredicted RBP22.56■■□□□ 1.2
TSPAN4-204ENST00000397404 HDAC9Q9UKV0 1011 aa22.56■■□□□ 1.2
TSPAN4-204ENST00000397404 E7EWF7 191 aa22.55■■□□□ 1.2
TSPAN4-204ENST00000397404 NFKBIEO00221 500 aa22.55■■□□□ 1.2
TSPAN4-204ENST00000397404 RPS6KB1P23443 525 aa22.55■■□□□ 1.2
TSPAN4-204ENST00000397404 BTDP43251 543 aa22.55■■□□□ 1.2
TSPAN4-204ENST00000397404 RSBN1LQ6PCB5 846 aaPredicted RBP22.55■■□□□ 1.2
TSPAN4-204ENST00000397404 DHX32Q7L7V1 743 aaKnown RBP22.55■■□□□ 1.2
TSPAN4-204ENST00000397404 RALYLQ86SE5 291 aaKnown RBP22.55■■□□□ 1.2
TSPAN4-204ENST00000397404 CERS5Q8N5B7 392 aa22.55■■□□□ 1.2
TSPAN4-204ENST00000397404 ZDHHC15Q96MV8 337 aa22.55■■□□□ 1.2
TSPAN4-204ENST00000397404 TTC14Q96N46 770 aa22.55■■□□□ 1.2
TSPAN4-204ENST00000397404 EPB41L4AQ9HCS5 686 aaPredicted RBP22.55■■□□□ 1.2
TSPAN4-204ENST00000397404 RPS12P25398 132 aaKnown RBP22.54■■□□□ 1.2
TSPAN4-204ENST00000397404 DIXDC1Q155Q3 683 aa22.54■■□□□ 1.2
TSPAN4-204ENST00000397404 NLGN2Q8NFZ4 835 aa22.54■■□□□ 1.2
TSPAN4-204ENST00000397404 ZSCAN31Q96LW9 406 aaPredicted RBP22.54■■□□□ 1.2
TSPAN4-204ENST00000397404 KRT23Q9C075 422 aa22.54■■□□□ 1.2
TSPAN4-204ENST00000397404 PDRG1Q9NUG6 133 aa22.54■■□□□ 1.2
TSPAN4-204ENST00000397404 ZNF646O15015 1829 aaPredicted RBP22.54■■□□□ 1.2
TSPAN4-204ENST00000397404 TIAM2Q8IVF5 1701 aa22.54■■□□□ 1.2
TSPAN4-204ENST00000397404 SCN9AQ15858 1988 aa22.54■■□□□ 1.2
TSPAN4-204ENST00000397404 NPM3O75607 178 aaKnown RBP22.54■■□□□ 1.2
TSPAN4-204ENST00000397404 ADCK5Q3MIX3 580 aa22.54■■□□□ 1.2
TSPAN4-204ENST00000397404 OGFOD1Q8N543 542 aa22.54■■□□□ 1.2
TSPAN4-204ENST00000397404 STAG1Q8WVM7 1258 aa22.54■■□□□ 1.2
TSPAN4-204ENST00000397404 ZNF287Q9HBT7 754 aa22.54■■□□□ 1.2
TSPAN4-204ENST00000397404 DCP1AQ9NPI6 582 aaPredicted RBP22.54■■□□□ 1.2
TSPAN4-204ENST00000397404 DAGLAQ9Y4D2 1042 aa22.54■■□□□ 1.2
TSPAN4-204ENST00000397404 YDJCA8MPS7 323 aa22.53■■□□□ 1.2
TSPAN4-204ENST00000397404 USP5P45974 858 aa22.53■■□□□ 1.2
TSPAN4-204ENST00000397404 DYNLL1P63167 89 aaKnown RBP22.53■■□□□ 1.2
TSPAN4-204ENST00000397404 SYT17Q9BSW7 474 aa22.53■■□□□ 1.2
TSPAN4-204ENST00000397404 UPF3BQ9BZI7 483 aaKnown RBP22.53■■□□□ 1.2
TSPAN4-204ENST00000397404 SH2B1Q9NRF2 756 aaPredicted RBP22.53■■□□□ 1.2
TSPAN4-204ENST00000397404 MCM5P33992 734 aa22.52■■□□□ 1.2
TSPAN4-204ENST00000397404 GRIK5Q16478 980 aa22.52■■□□□ 1.2
TSPAN4-204ENST00000397404 AKNAD1Q5T1N1 836 aa22.52■■□□□ 1.2
TSPAN4-204ENST00000397404 MFSD6Q6ZSS7 791 aa22.52■■□□□ 1.2
TSPAN4-204ENST00000397404 CRKP46108 304 aa22.51■■□□□ 1.19
TSPAN4-204ENST00000397404 PPARAQ07869 468 aa22.51■■□□□ 1.19
TSPAN4-204ENST00000397404 CIAPIN1Q6FI81 312 aa22.51■■□□□ 1.19
TSPAN4-204ENST00000397404 TEX11Q8IYF3 940 aa22.51■■□□□ 1.19
TSPAN4-204ENST00000397404 SDR42E1Q8WUS8 393 aa22.51■■□□□ 1.19
TSPAN4-204ENST00000397404 MKRN1Q9UHC7 482 aaKnown RBP22.51■■□□□ 1.19
TSPAN4-204ENST00000397404 LIMCH1Q9UPQ0 1083 aa22.51■■□□□ 1.19
TSPAN4-204ENST00000397404 PRKAB2O43741 272 aa22.5■■□□□ 1.19
TSPAN4-204ENST00000397404 FGRP09769 529 aa22.5■■□□□ 1.19
TSPAN4-204ENST00000397404 EIF6P56537 245 aaKnown RBP22.5■■□□□ 1.19
TSPAN4-204ENST00000397404 RHBDL3P58872 404 aa22.49■■□□□ 1.19
TSPAN4-204ENST00000397404 MTMR14Q8NCE2 650 aa22.49■■□□□ 1.19
TSPAN4-204ENST00000397404 INTS4Q96HW7 963 aaKnown RBP22.49■■□□□ 1.19
TSPAN4-204ENST00000397404 GMLQ99445 158 aa22.49■■□□□ 1.19
TSPAN4-204ENST00000397404 AGXT2Q9BYV1 514 aa22.49■■□□□ 1.19
TSPAN4-204ENST00000397404 ROBO3Q96MS0 1386 aa22.48■■□□□ 1.19
TSPAN4-204ENST00000397404 FZD9O00144 591 aa22.48■■□□□ 1.19
TSPAN4-204ENST00000397404 PSMD14O00487 310 aa22.48■■□□□ 1.19
TSPAN4-204ENST00000397404 HSP90AA1P07900 732 aaKnown RBP22.48■■□□□ 1.19
TSPAN4-204ENST00000397404 LMNB1P20700 586 aa22.48■■□□□ 1.19
TSPAN4-204ENST00000397404 EXOSC10Q01780 885 aaKnown RBP22.48■■□□□ 1.19
TSPAN4-204ENST00000397404 PDE4BQ07343 736 aa22.48■■□□□ 1.19
TSPAN4-204ENST00000397404 CTR9Q6PD62 1173 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms