RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 MAP3K14Q99558 947 aa18.18■□□□□ 0.5
HOXA3-202ENST00000396352 ZNF330Q9Y3S2 320 aaPredicted RBP18.18■□□□□ 0.5
HOXA3-202ENST00000396352 PSDA5PKW4 1024 aaPredicted RBP18.18■□□□□ 0.5
HOXA3-202ENST00000396352 RXRAP19793 462 aa18.18■□□□□ 0.5
HOXA3-202ENST00000396352 SFPQP23246 707 aaKnown RBP eCLIP18.18■□□□□ 0.51e-6■■■■□ 20.5
HOXA3-202ENST00000396352 KRT40Q6A162 431 aa18.18■□□□□ 0.5
HOXA3-202ENST00000396352 APOA5Q6Q788 366 aa18.18■□□□□ 0.5
HOXA3-202ENST00000396352 ZNF512BQ96KM6 892 aaPredicted RBP18.18■□□□□ 0.5
HOXA3-202ENST00000396352 CHD4Q14839 1912 aa18.18■□□□□ 0.5
HOXA3-202ENST00000396352 ANKRD36CQ5JPF3 1778 aa18.17■□□□□ 0.5
HOXA3-202ENST00000396352 FAM237AA0A1B0GTK4 181 aa18.17■□□□□ 0.5
HOXA3-202ENST00000396352 PPP6R2O75170 966 aa18.17■□□□□ 0.5
HOXA3-202ENST00000396352 ATP1A3P13637 1013 aa18.17■□□□□ 0.5
HOXA3-202ENST00000396352 IL2RBP14784 551 aa18.17■□□□□ 0.5
HOXA3-202ENST00000396352 LMOD1P29536 600 aaPredicted RBP18.17■□□□□ 0.5
HOXA3-202ENST00000396352 SYKP43405 635 aa18.17■□□□□ 0.5
HOXA3-202ENST00000396352 TPM4P67936 248 aa18.17■□□□□ 0.5
HOXA3-202ENST00000396352 FANCCQ00597 558 aa18.17■□□□□ 0.5
HOXA3-202ENST00000396352 METTL24Q5JXM2 366 aa18.17■□□□□ 0.5
HOXA3-202ENST00000396352 SLC9C2Q5TAH2 1124 aa18.17■□□□□ 0.5
HOXA3-202ENST00000396352 ISM2Q6H9L7 571 aa18.17■□□□□ 0.5
HOXA3-202ENST00000396352 ZNF397Q8NF99 534 aaPredicted RBP18.17■□□□□ 0.5
HOXA3-202ENST00000396352 PIH1D3Q9NQM4 214 aaKnown RBP18.17■□□□□ 0.5
HOXA3-202ENST00000396352 PRDM11Q9NQV5 511 aa18.17■□□□□ 0.5
HOXA3-202ENST00000396352 MORC2Q9Y6X9 1032 aaPredicted RBP18.17■□□□□ 0.5
HOXA3-202ENST00000396352 TRDNQ13061 729 aa18.17■□□□□ 0.5
HOXA3-202ENST00000396352 VGLL2Q8N8G2 317 aa18.17■□□□□ 0.5
HOXA3-202ENST00000396352 L2HGDHQ9H9P8 463 aa18.17■□□□□ 0.5
HOXA3-202ENST00000396352 LRP6O75581 1613 aa18.17■□□□□ 0.5
HOXA3-202ENST00000396352 PHKBQ93100 1093 aa18.17■□□□□ 0.5
HOXA3-202ENST00000396352 CDHR2Q9BYE9 1310 aa18.16■□□□□ 0.5
HOXA3-202ENST00000396352 SLU7O95391 586 aaKnown RBP18.16■□□□□ 0.5
HOXA3-202ENST00000396352 ELF2Q15723 593 aa18.16■□□□□ 0.5
HOXA3-202ENST00000396352 GREM2Q9H772 168 aa18.16■□□□□ 0.5
HOXA3-202ENST00000396352 ITGA6P23229 1130 aa18.16■□□□□ 0.5
HOXA3-202ENST00000396352 NTRK3Q16288 839 aa18.16■□□□□ 0.5
HOXA3-202ENST00000396352 KIF6Q6ZMV9 814 aa18.16■□□□□ 0.5
HOXA3-202ENST00000396352 TTLL11Q8NHH1 800 aa18.16■□□□□ 0.5
HOXA3-202ENST00000396352 ABCA3Q99758 1704 aa18.16■□□□□ 0.5
HOXA3-202ENST00000396352 XIRP1Q702N8 1843 aaKnown RBP18.16■□□□□ 0.5
HOXA3-202ENST00000396352 ARAP2Q8WZ64 1704 aa18.15■□□□□ 0.5
HOXA3-202ENST00000396352 RANBP6O60518 1105 aaKnown RBP18.15■□□□□ 0.5
HOXA3-202ENST00000396352 CDKL5O76039 1030 aa18.15■□□□□ 0.5
HOXA3-202ENST00000396352 RESP18Q5W5W9 173 aa18.15■□□□□ 0.5
HOXA3-202ENST00000396352 LDHAL6AQ6ZMR3 332 aa18.15■□□□□ 0.5
HOXA3-202ENST00000396352 UBE3CQ15386 1083 aa18.15■□□□□ 0.5
HOXA3-202ENST00000396352 FBXO38Q6PIJ6 1188 aa18.15■□□□□ 0.5
HOXA3-202ENST00000396352 IGDCC4Q8TDY8 1250 aa18.15■□□□□ 0.5
HOXA3-202ENST00000396352 B4E1Z4 1266 aa18.15■□□□□ 0.5
HOXA3-202ENST00000396352 PNOCQ13519 176 aa18.15■□□□□ 0.5
HOXA3-202ENST00000396352 DHX8Q14562 1220 aaKnown RBP18.15■□□□□ 0.5
HOXA3-202ENST00000396352 FAM217BQ9NTX9 383 aaPredicted RBP18.15■□□□□ 0.5
HOXA3-202ENST00000396352 ZNF532Q9HCE3 1301 aa18.14■□□□□ 0.49
HOXA3-202ENST00000396352 TCRBV5S4A2TA0A5A2 114 aa18.14■□□□□ 0.49
HOXA3-202ENST00000396352 TTF1Q15361 905 aaPredicted RBP18.14■□□□□ 0.49
HOXA3-202ENST00000396352 CCDC93Q567U6 631 aa18.14■□□□□ 0.49
HOXA3-202ENST00000396352 DNAJC10Q8IXB1 793 aa18.14■□□□□ 0.49
HOXA3-202ENST00000396352 DPF2Q92785 391 aa18.14■□□□□ 0.49
HOXA3-202ENST00000396352 CARD10Q9BWT7 1032 aa18.14■□□□□ 0.49
HOXA3-202ENST00000396352 LY9Q9HBG7 655 aa18.14■□□□□ 0.49
HOXA3-202ENST00000396352 DOCK2Q92608 1830 aa18.14■□□□□ 0.49
HOXA3-202ENST00000396352 METTL16Q86W50 562 aaKnown RBP18.14■□□□□ 0.49
HOXA3-202ENST00000396352 MICU3Q86XE3 530 aa18.14■□□□□ 0.49
HOXA3-202ENST00000396352 SYTL4Q96C24 671 aaPredicted RBP18.14■□□□□ 0.49
HOXA3-202ENST00000396352 CLIC6Q96NY7 704 aa18.14■□□□□ 0.49
HOXA3-202ENST00000396352 MAP3K15Q6ZN16 1313 aa18.14■□□□□ 0.49
HOXA3-202ENST00000396352 UBN2Q6ZU65 1347 aa18.14■□□□□ 0.49
HOXA3-202ENST00000396352 HLFQ16534 295 aa18.13■□□□□ 0.49
HOXA3-202ENST00000396352 SYT10Q6XYQ8 523 aa18.13■□□□□ 0.49
HOXA3-202ENST00000396352 GIGYF2Q6Y7W6 1299 aaKnown RBP18.13■□□□□ 0.49
HOXA3-202ENST00000396352 JMYQ8N9B5 988 aa18.13■□□□□ 0.49
HOXA3-202ENST00000396352 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.13■□□□□ 0.49
HOXA3-202ENST00000396352 FAM53CQ9NYF3 392 aa18.13■□□□□ 0.49
HOXA3-202ENST00000396352 TIAM2Q8IVF5 1701 aa18.13■□□□□ 0.49
HOXA3-202ENST00000396352 UBE2Q2LH0YL09 131 aa18.13■□□□□ 0.49
HOXA3-202ENST00000396352 MYL5Q02045 173 aa18.13■□□□□ 0.49
HOXA3-202ENST00000396352 NLRP10Q86W26 655 aa18.13■□□□□ 0.49
HOXA3-202ENST00000396352 TMEM87BQ96K49 555 aa18.13■□□□□ 0.49
HOXA3-202ENST00000396352 LRP5O75197 1615 aa18.13■□□□□ 0.49
HOXA3-202ENST00000396352 IDH1O75874 414 aaKnown RBP18.13■□□□□ 0.49
HOXA3-202ENST00000396352 PDE6AP16499 860 aa18.13■□□□□ 0.49
HOXA3-202ENST00000396352 CTSWP56202 376 aa18.13■□□□□ 0.49
HOXA3-202ENST00000396352 SGMS1Q86VZ5 419 aa18.13■□□□□ 0.49
HOXA3-202ENST00000396352 LRRN4CLQ8ND94 238 aa18.13■□□□□ 0.49
HOXA3-202ENST00000396352 TMOD3Q9NYL9 352 aa18.13■□□□□ 0.49
HOXA3-202ENST00000396352 WWC3Q9ULE0 1092 aa18.13■□□□□ 0.49
HOXA3-202ENST00000396352 ZBTB43O43298 467 aa18.12■□□□□ 0.49
HOXA3-202ENST00000396352 APPP05067 770 aa18.12■□□□□ 0.49
HOXA3-202ENST00000396352 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.12■□□□□ 0.49
HOXA3-202ENST00000396352 TMX1Q9H3N1 280 aa18.12■□□□□ 0.49
HOXA3-202ENST00000396352 ASAP1Q9ULH1 1129 aa18.12■□□□□ 0.49
HOXA3-202ENST00000396352 ITGB4P16144 1822 aa18.12■□□□□ 0.49
HOXA3-202ENST00000396352 ARID4AP29374 1257 aaPredicted RBP18.12■□□□□ 0.49
HOXA3-202ENST00000396352 FOXP4Q8IVH2 680 aaPredicted RBP18.12■□□□□ 0.49
HOXA3-202ENST00000396352 MYL10Q9BUA6 226 aa18.12■□□□□ 0.49
HOXA3-202ENST00000396352 INCENPQ9NQS7 918 aa18.12■□□□□ 0.49
HOXA3-202ENST00000396352 KIF20AO95235 890 aa18.11■□□□□ 0.49
HOXA3-202ENST00000396352 GPTP24298 496 aa18.11■□□□□ 0.49
HOXA3-202ENST00000396352 PHKA1P46020 1223 aa18.11■□□□□ 0.49
HOXA3-202ENST00000396352 LONRF3Q496Y0 759 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms