RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 ZSCAN16Q9H4T2 348 aaPredicted RBP12.04□□□□□ -0.48
HIF1A-203ENST00000394997 PDS5AQ29RF7 1337 aaKnown RBP12.04□□□□□ -0.48
HIF1A-203ENST00000394997 LDHAL6AQ6ZMR3 332 aa12.04□□□□□ -0.48
HIF1A-203ENST00000394997 FAM184AQ8NB25 1140 aa12.04□□□□□ -0.48
HIF1A-203ENST00000394997 SPATA5Q8NB90 893 aa12.04□□□□□ -0.48
HIF1A-203ENST00000394997 LINC00301Q8NCQ3 95 aa12.04□□□□□ -0.48
HIF1A-203ENST00000394997 TFIP11Q9UBB9 837 aaKnown RBP12.04□□□□□ -0.48
HIF1A-203ENST00000394997 KIF13BQ9NQT8 1826 aa12.04□□□□□ -0.48
HIF1A-203ENST00000394997 ANKRD18BA2A2Z9 1011 aa12.04□□□□□ -0.48
HIF1A-203ENST00000394997 PHF14O94880 888 aa12.04□□□□□ -0.48
HIF1A-203ENST00000394997 TNNT3P45378 269 aaPredicted RBP12.04□□□□□ -0.48
HIF1A-203ENST00000394997 DACT1Q9NYF0 836 aa12.04□□□□□ -0.48
HIF1A-203ENST00000394997 NPHP1O15259 732 aa12.03□□□□□ -0.48
HIF1A-203ENST00000394997 ONECUT3O60422 494 aaPredicted RBP12.03□□□□□ -0.48
HIF1A-203ENST00000394997 WDHD1O75717 1129 aaPredicted RBP12.03□□□□□ -0.48
HIF1A-203ENST00000394997 U2AF2P26368 475 aaKnown RBP eCLIP12.03□□□□□ -0.485e-9■■■■□ 19.5
HIF1A-203ENST00000394997 KIF23Q02241 960 aaPredicted RBP12.03□□□□□ -0.48
HIF1A-203ENST00000394997 FBXO18Q8NFZ0 1043 aa12.03□□□□□ -0.48
HIF1A-203ENST00000394997 AIFM3Q96NN9 605 aa12.03□□□□□ -0.48
HIF1A-203ENST00000394997 FKBP4Q02790 459 aaKnown RBP eCLIP12.03□□□□□ -0.48
HIF1A-203ENST00000394997 VPS72Q15906 364 aa12.03□□□□□ -0.48
HIF1A-203ENST00000394997 TTC39AQ5SRH9 613 aa12.03□□□□□ -0.48
HIF1A-203ENST00000394997 C11orf57Q6ZUT1 292 aaPredicted RBP12.03□□□□□ -0.48
HIF1A-203ENST00000394997 LCORLQ8N3X6 602 aa12.03□□□□□ -0.48
HIF1A-203ENST00000394997 CLIC4Q9Y696 253 aa12.03□□□□□ -0.48
HIF1A-203ENST00000394997 VPS37CA5D8V6 355 aaPredicted RBP12.03□□□□□ -0.48
HIF1A-203ENST00000394997 LETM1O95202 739 aaPredicted RBP12.03□□□□□ -0.48
HIF1A-203ENST00000394997 PDCP20941 246 aa12.03□□□□□ -0.48
HIF1A-203ENST00000394997 MCM5P33992 734 aa12.03□□□□□ -0.48
HIF1A-203ENST00000394997 KRT85P78386 507 aa12.03□□□□□ -0.48
HIF1A-203ENST00000394997 STAG1Q8WVM7 1258 aa12.03□□□□□ -0.48
HIF1A-203ENST00000394997 KIF3AQ9Y496 699 aa12.03□□□□□ -0.48
HIF1A-203ENST00000394997 MORC2Q9Y6X9 1032 aaPredicted RBP12.03□□□□□ -0.48
HIF1A-203ENST00000394997 DYNC1I1O14576 645 aa12.02□□□□□ -0.48
HIF1A-203ENST00000394997 PRC1O43663 620 aa12.02□□□□□ -0.48
HIF1A-203ENST00000394997 PRKAB2O43741 272 aa12.02□□□□□ -0.48
HIF1A-203ENST00000394997 TOB1P50616 345 aaPredicted RBP12.02□□□□□ -0.48
HIF1A-203ENST00000394997 CCT2P78371 535 aaKnown RBP12.02□□□□□ -0.48
HIF1A-203ENST00000394997 TYRO3Q06418 890 aa12.02□□□□□ -0.48
HIF1A-203ENST00000394997 CLEC4GQ6UXB4 293 aa12.02□□□□□ -0.48
HIF1A-203ENST00000394997 SCAND2PQ9GZW5 306 aaPredicted RBP12.02□□□□□ -0.48
HIF1A-203ENST00000394997 CBX8Q9HC52 389 aa12.02□□□□□ -0.48
HIF1A-203ENST00000394997 POLR3EQ9NVU0 708 aa12.02□□□□□ -0.48
HIF1A-203ENST00000394997 USP25Q9UHP3 1055 aa12.02□□□□□ -0.48
HIF1A-203ENST00000394997 TRMT112Q9UI30 125 aaKnown RBP12.02□□□□□ -0.48
HIF1A-203ENST00000394997 HAND2P61296 217 aa12.02□□□□□ -0.49
HIF1A-203ENST00000394997 MDM2Q00987 491 aaPredicted RBP12.02□□□□□ -0.49
HIF1A-203ENST00000394997 APOA5Q6Q788 366 aa12.02□□□□□ -0.49
HIF1A-203ENST00000394997 PDCL2Q8N4E4 241 aa12.02□□□□□ -0.49
HIF1A-203ENST00000394997 PCDHA7Q9UN72 937 aa12.02□□□□□ -0.49
HIF1A-203ENST00000394997 ADAMTS3O15072 1205 aa12.02□□□□□ -0.49
HIF1A-203ENST00000394997 BCAMP50895 628 aa12.02□□□□□ -0.49
HIF1A-203ENST00000394997 TERF1P54274 439 aa12.02□□□□□ -0.49
HIF1A-203ENST00000394997 HMGN5P82970 282 aaKnown RBP12.02□□□□□ -0.49
HIF1A-203ENST00000394997 NCAPHQ15003 741 aa12.02□□□□□ -0.49
HIF1A-203ENST00000394997 METTL24Q5JXM2 366 aa12.02□□□□□ -0.49
HIF1A-203ENST00000394997 CCDC158Q5M9N0 1113 aa12.02□□□□□ -0.49
HIF1A-203ENST00000394997 STK36Q9NRP7 1315 aa12.02□□□□□ -0.49
HIF1A-203ENST00000394997 ADCY5O95622 1261 aa12.01□□□□□ -0.49
HIF1A-203ENST00000394997 CHRNDQ07001 517 aa12.01□□□□□ -0.49
HIF1A-203ENST00000394997 ERFEQ4G0M1 354 aa12.01□□□□□ -0.49
HIF1A-203ENST00000394997 HELBQ8NG08 1087 aaPredicted RBP12.01□□□□□ -0.49
HIF1A-203ENST00000394997 ATP6V1DQ9Y5K8 247 aa12.01□□□□□ -0.49
HIF1A-203ENST00000394997 GUCY1A2P33402 732 aa12.01□□□□□ -0.49
HIF1A-203ENST00000394997 DDB1Q16531 1140 aa12.01□□□□□ -0.49
HIF1A-203ENST00000394997 TBC1D9BQ66K14 1250 aa12.01□□□□□ -0.49
HIF1A-203ENST00000394997 OTUD7BQ6GQQ9 843 aa12.01□□□□□ -0.49
HIF1A-203ENST00000394997 SARM1Q6SZW1 724 aa12.01□□□□□ -0.49
HIF1A-203ENST00000394997 IFNL3Q8IZI9 196 aa12.01□□□□□ -0.49
HIF1A-203ENST00000394997 TNFRSF25Q93038 417 aa12.01□□□□□ -0.49
HIF1A-203ENST00000394997 TRERF1Q96PN7 1200 aa12.01□□□□□ -0.49
HIF1A-203ENST00000394997 ZSWIM5Q9P217 1185 aa12.01□□□□□ -0.49
HIF1A-203ENST00000394997 UTRNP46939 3433 aa12.01□□□□□ -0.49
HIF1A-203ENST00000394997 SNED1Q8TER0 1413 aa12.01□□□□□ -0.49
HIF1A-203ENST00000394997 LIFRP42702 1097 aa12.01□□□□□ -0.49
HIF1A-203ENST00000394997 SLC9C2Q5TAH2 1124 aa12.01□□□□□ -0.49
HIF1A-203ENST00000394997 ATL3Q6DD88 541 aa12.01□□□□□ -0.49
HIF1A-203ENST00000394997 FBXO33Q7Z6M2 555 aa12.01□□□□□ -0.49
HIF1A-203ENST00000394997 C17orf53Q8N3J3 647 aaPredicted RBP12.01□□□□□ -0.49
HIF1A-203ENST00000394997 ACSBG1Q96GR2 724 aa12.01□□□□□ -0.49
HIF1A-203ENST00000394997 SCN9AQ15858 1988 aa12.01□□□□□ -0.49
HIF1A-203ENST00000394997 PATL2C9JE40 543 aaKnown RBP12□□□□□ -0.49
HIF1A-203ENST00000394997 KCNJ4P48050 445 aa12□□□□□ -0.49
HIF1A-203ENST00000394997 A0A1W2PQ27 194 aa12□□□□□ -0.49
HIF1A-203ENST00000394997 A0A1W2PQ64 194 aa12□□□□□ -0.49
HIF1A-203ENST00000394997 A0A1W2PQD8 194 aa12□□□□□ -0.49
HIF1A-203ENST00000394997 ATP6V1AP38606 617 aa12□□□□□ -0.49
HIF1A-203ENST00000394997 PARP10Q53GL7 1025 aa12□□□□□ -0.49
HIF1A-203ENST00000394997 TTC12Q9H892 705 aaPredicted RBP12□□□□□ -0.49
HIF1A-203ENST00000394997 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12□□□□□ -0.49
HIF1A-203ENST00000394997 ROBO3Q96MS0 1386 aa12□□□□□ -0.49
HIF1A-203ENST00000394997 ERICH4A6NGS2 130 aa12□□□□□ -0.49
HIF1A-203ENST00000394997 PDE4CQ08493 712 aa12□□□□□ -0.49
HIF1A-203ENST00000394997 PKN1Q16512 942 aa12□□□□□ -0.49
HIF1A-203ENST00000394997 MED15Q96RN5 788 aa12□□□□□ -0.49
HIF1A-203ENST00000394997 A0A087WWV3 80 aa11.99□□□□□ -0.49
HIF1A-203ENST00000394997 GOLGA6L6A8MZA4 724 aa11.99□□□□□ -0.49
HIF1A-203ENST00000394997 WNT7AO00755 349 aa11.99□□□□□ -0.49
HIF1A-203ENST00000394997 CCDC144BQ3MJ40 725 aa11.99□□□□□ -0.49
HIF1A-203ENST00000394997 RC3H1Q5TC82 1133 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms