RNA–Protein interactions for RNA: ENST00000381209.7

RPAIN-203, Transcript of RPA interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPAIN, Length 1,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-203ENST00000381209 WDR66Q8TBY9 1149 aa20.29■□□□□ 0.84
RPAIN-203ENST00000381209 ZNF384Q8TF68 577 aa20.29■□□□□ 0.84
RPAIN-203ENST00000381209 PODXL2Q9NZ53 605 aa20.29■□□□□ 0.84
RPAIN-203ENST00000381209 NAP1L2Q9ULW6 460 aaPredicted RBP20.29■□□□□ 0.84
RPAIN-203ENST00000381209 NEDD4P46934 1319 aa20.29■□□□□ 0.84
RPAIN-203ENST00000381209 MECOMQ03112 1051 aa20.28■□□□□ 0.84
RPAIN-203ENST00000381209 CHAF1AQ13111 956 aaPredicted RBP20.28■□□□□ 0.84
RPAIN-203ENST00000381209 DDX11Q96FC9 970 aa20.28■□□□□ 0.84
RPAIN-203ENST00000381209 NCOA5Q9HCD5 579 aaKnown RBP20.28■□□□□ 0.84
RPAIN-203ENST00000381209 HPS5Q9UPZ3 1129 aa20.28■□□□□ 0.84
RPAIN-203ENST00000381209 LAMA4Q16363 1823 aa20.28■□□□□ 0.84
RPAIN-203ENST00000381209 GOLGA8BA8MQT2 603 aa20.27■□□□□ 0.84
RPAIN-203ENST00000381209 H3BQV1 296 aa20.27■□□□□ 0.84
RPAIN-203ENST00000381209 LIFRP42702 1097 aa20.27■□□□□ 0.84
RPAIN-203ENST00000381209 MRE11P49959 708 aa20.27■□□□□ 0.84
RPAIN-203ENST00000381209 DNM1Q05193 864 aaKnown RBP20.27■□□□□ 0.84
RPAIN-203ENST00000381209 CTDSPL2Q05D32 466 aa20.27■□□□□ 0.84
RPAIN-203ENST00000381209 IFFO2Q5TF58 517 aa20.27■□□□□ 0.84
RPAIN-203ENST00000381209 IGDCC4Q8TDY8 1250 aa20.27■□□□□ 0.84
RPAIN-203ENST00000381209 ZSCAN16Q9H4T2 348 aaPredicted RBP20.27■□□□□ 0.84
RPAIN-203ENST00000381209 GDPD2Q9HCC8 539 aa20.27■□□□□ 0.84
RPAIN-203ENST00000381209 GGA1Q9UJY5 639 aa20.27■□□□□ 0.84
RPAIN-203ENST00000381209 TIAM2Q8IVF5 1701 aa20.27■□□□□ 0.84
RPAIN-203ENST00000381209 MYO5AQ9Y4I1 1855 aaKnown RBP20.27■□□□□ 0.84
RPAIN-203ENST00000381209 UBE2HP62256 183 aa20.27■□□□□ 0.83
RPAIN-203ENST00000381209 KRT85P78386 507 aa20.27■□□□□ 0.83
RPAIN-203ENST00000381209 PPARAQ07869 468 aa20.27■□□□□ 0.83
RPAIN-203ENST00000381209 SGMS1Q86VZ5 419 aa20.27■□□□□ 0.83
RPAIN-203ENST00000381209 RGS22Q8NE09 1264 aa20.27■□□□□ 0.83
RPAIN-203ENST00000381209 DYNLL1P63167 89 aaKnown RBP20.26■□□□□ 0.83
RPAIN-203ENST00000381209 ZSCAN23Q3MJ62 389 aa20.26■□□□□ 0.83
RPAIN-203ENST00000381209 SYAP1Q96A49 352 aaPredicted RBP20.26■□□□□ 0.83
RPAIN-203ENST00000381209 NSFL1CQ9UNZ2 370 aaKnown RBP20.26■□□□□ 0.83
RPAIN-203ENST00000381209 CACNA1SQ13698 1873 aa20.25■□□□□ 0.83
RPAIN-203ENST00000381209 GADD45BO75293 160 aaPredicted RBP20.25■□□□□ 0.83
RPAIN-203ENST00000381209 UFL1O94874 794 aa20.25■□□□□ 0.83
RPAIN-203ENST00000381209 PCP11498 1178 aaKnown RBP20.25■□□□□ 0.83
RPAIN-203ENST00000381209 PRDX5P30044 214 aa20.25■□□□□ 0.83
RPAIN-203ENST00000381209 RESTQ13127 1097 aa20.25■□□□□ 0.83
RPAIN-203ENST00000381209 SP8Q8IXZ3 490 aa20.25■□□□□ 0.83
RPAIN-203ENST00000381209 NKX2-3Q8TAU0 364 aa20.25■□□□□ 0.83
RPAIN-203ENST00000381209 SDR42E1Q8WUS8 393 aa20.25■□□□□ 0.83
RPAIN-203ENST00000381209 ZSWIM5Q9P217 1185 aa20.25■□□□□ 0.83
RPAIN-203ENST00000381209 TACC3Q9Y6A5 838 aa20.25■□□□□ 0.83
RPAIN-203ENST00000381209 FIBPO43427 364 aa20.24■□□□□ 0.83
RPAIN-203ENST00000381209 KDM4AO75164 1064 aa20.24■□□□□ 0.83
RPAIN-203ENST00000381209 TMEM67Q5HYA8 995 aa20.24■□□□□ 0.83
RPAIN-203ENST00000381209 ILDR1Q86SU0 546 aaPredicted RBP20.24■□□□□ 0.83
RPAIN-203ENST00000381209 FERMT3Q86UX7 667 aa20.24■□□□□ 0.83
RPAIN-203ENST00000381209 CRNKL1Q9BZJ0 848 aaKnown RBP20.24■□□□□ 0.83
RPAIN-203ENST00000381209 LY9Q9HBG7 655 aa20.24■□□□□ 0.83
RPAIN-203ENST00000381209 TMEM63CQ9P1W3 806 aa20.24■□□□□ 0.83
RPAIN-203ENST00000381209 ELP1O95163 1332 aa20.23■□□□□ 0.83
RPAIN-203ENST00000381209 CPLX1O14810 134 aa20.23■□□□□ 0.83
RPAIN-203ENST00000381209 LDHBP07195 334 aaKnown RBP20.23■□□□□ 0.83
RPAIN-203ENST00000381209 IL1R1P14778 569 aa20.23■□□□□ 0.83
RPAIN-203ENST00000381209 GSTO1P78417 241 aa20.23■□□□□ 0.83
RPAIN-203ENST00000381209 SART3Q15020 963 aaKnown RBP20.23■□□□□ 0.83
RPAIN-203ENST00000381209 APOA5Q6Q788 366 aa20.23■□□□□ 0.83
RPAIN-203ENST00000381209 DZIP1Q86YF9 867 aaKnown RBP20.23■□□□□ 0.83
RPAIN-203ENST00000381209 ATP8A2Q9NTI2 1148 aa20.23■□□□□ 0.83
RPAIN-203ENST00000381209 IFIT3O14879 490 aaKnown RBP20.22■□□□□ 0.83
RPAIN-203ENST00000381209 CDKL5O76039 1030 aa20.22■□□□□ 0.83
RPAIN-203ENST00000381209 FDPSP14324 419 aaKnown RBP20.22■□□□□ 0.83
RPAIN-203ENST00000381209 NPR1P16066 1061 aa20.22■□□□□ 0.83
RPAIN-203ENST00000381209 METAP2P50579 478 aaKnown RBP eCLIP20.22■□□□□ 0.83
RPAIN-203ENST00000381209 SLC51AQ86UW1 340 aa20.22■□□□□ 0.83
RPAIN-203ENST00000381209 GAS2L3Q86XJ1 694 aa20.22■□□□□ 0.83
RPAIN-203ENST00000381209 TMTC2Q8N394 836 aa20.22■□□□□ 0.83
RPAIN-203ENST00000381209 SCAND2PQ9GZW5 306 aaPredicted RBP20.22■□□□□ 0.83
RPAIN-203ENST00000381209 GRPEL1Q9HAV7 217 aa20.22■□□□□ 0.83
RPAIN-203ENST00000381209 CD209Q9NNX6 404 aa20.22■□□□□ 0.83
RPAIN-203ENST00000381209 INCENPQ9NQS7 918 aa20.22■□□□□ 0.83
RPAIN-203ENST00000381209 RBM27Q9P2N5 1060 aaKnown RBP20.22■□□□□ 0.83
RPAIN-203ENST00000381209 PARP3Q9Y6F1 533 aa20.22■□□□□ 0.83
RPAIN-203ENST00000381209 MINDY4BA8MYZ0 360 aa20.22■□□□□ 0.83
RPAIN-203ENST00000381209 PPEF1O14829 653 aaPredicted RBP20.22■□□□□ 0.83
RPAIN-203ENST00000381209 FGRP09769 529 aa20.22■□□□□ 0.83
RPAIN-203ENST00000381209 XRCC6P12956 609 aaKnown RBP eCLIP20.22■□□□□ 0.83
RPAIN-203ENST00000381209 PDE6BP35913 854 aa20.22■□□□□ 0.83
RPAIN-203ENST00000381209 CPLX2Q6PUV4 134 aaKnown RBP20.22■□□□□ 0.83
RPAIN-203ENST00000381209 TBC1D16Q8TBP0 767 aa20.22■□□□□ 0.83
RPAIN-203ENST00000381209 ATP6V0A2Q9Y487 856 aa20.22■□□□□ 0.83
RPAIN-203ENST00000381209 ZBTB43O43298 467 aa20.21■□□□□ 0.83
RPAIN-203ENST00000381209 SRGNP10124 158 aa20.21■□□□□ 0.83
RPAIN-203ENST00000381209 RCAN1P53805 252 aa20.21■□□□□ 0.83
RPAIN-203ENST00000381209 ATL3Q6DD88 541 aa20.21■□□□□ 0.83
RPAIN-203ENST00000381209 NFXL1Q6ZNB6 911 aa20.21■□□□□ 0.83
RPAIN-203ENST00000381209 KLHL34Q8N239 644 aa20.21■□□□□ 0.83
RPAIN-203ENST00000381209 ESR2Q92731 530 aa20.21■□□□□ 0.83
RPAIN-203ENST00000381209 AATFQ9NY61 560 aaKnown RBP eCLIP20.21■□□□□ 0.83
RPAIN-203ENST00000381209 ORC3Q9UBD5 711 aaPredicted RBP20.21■□□□□ 0.83
RPAIN-203ENST00000381209 NID2Q14112 1375 aa20.2■□□□□ 0.82
RPAIN-203ENST00000381209 ERICH2A1L162 156 aa20.2■□□□□ 0.82
RPAIN-203ENST00000381209 CCDC69A6NI79 296 aa20.2■□□□□ 0.82
RPAIN-203ENST00000381209 LDHCP07864 332 aa20.2■□□□□ 0.82
RPAIN-203ENST00000381209 ALDH1B1P30837 517 aa20.2■□□□□ 0.82
RPAIN-203ENST00000381209 SBK1Q52WX2 424 aa20.2■□□□□ 0.82
RPAIN-203ENST00000381209 RRP12Q5JTH9 1297 aaKnown RBP20.2■□□□□ 0.82
RPAIN-203ENST00000381209 CTR9Q6PD62 1173 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms