RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 PPP6R2O75170 966 aa18.89■□□□□ 0.61
VPS16-203ENST00000380469 PDE6AP16499 860 aa18.89■□□□□ 0.61
VPS16-203ENST00000380469 SYKP43405 635 aa18.89■□□□□ 0.61
VPS16-203ENST00000380469 CCDC102BQ68D86 513 aa18.89■□□□□ 0.61
VPS16-203ENST00000380469 APOA5Q6Q788 366 aa18.89■□□□□ 0.61
VPS16-203ENST00000380469 NYAP1Q6ZVC0 841 aa18.89■□□□□ 0.61
VPS16-203ENST00000380469 VPS37DQ86XT2 251 aa18.89■□□□□ 0.61
VPS16-203ENST00000380469 CCAR2Q8N163 923 aaKnown RBP18.89■□□□□ 0.61
VPS16-203ENST00000380469 AIDAQ96BJ3 306 aa18.89■□□□□ 0.61
VPS16-203ENST00000380469 XPO4Q9C0E2 1151 aaKnown RBP18.89■□□□□ 0.61
VPS16-203ENST00000380469 NEDD4P46934 1319 aa18.89■□□□□ 0.61
VPS16-203ENST00000380469 PDE8AO60658 829 aa18.89■□□□□ 0.61
VPS16-203ENST00000380469 WDHD1O75717 1129 aaPredicted RBP18.89■□□□□ 0.61
VPS16-203ENST00000380469 CCDC150Q8NCX0 1101 aa18.89■□□□□ 0.61
VPS16-203ENST00000380469 TRMT1Q9NXH9 659 aaKnown RBP18.89■□□□□ 0.61
VPS16-203ENST00000380469 SLAIN2Q9P270 581 aa18.89■□□□□ 0.61
VPS16-203ENST00000380469 DENND2AQ9ULE3 1009 aa18.89■□□□□ 0.61
VPS16-203ENST00000380469 RXRAP19793 462 aa18.88■□□□□ 0.61
VPS16-203ENST00000380469 ARID4AP29374 1257 aaPredicted RBP18.88■□□□□ 0.61
VPS16-203ENST00000380469 IARSP41252 1262 aaKnown RBP18.88■□□□□ 0.61
VPS16-203ENST00000380469 CBX1P83916 185 aa18.88■□□□□ 0.61
VPS16-203ENST00000380469 MICU3Q86XE3 530 aa18.88■□□□□ 0.61
VPS16-203ENST00000380469 AIFM3Q96NN9 605 aa18.88■□□□□ 0.61
VPS16-203ENST00000380469 KIF2AO00139 706 aaPredicted RBP18.88■□□□□ 0.61
VPS16-203ENST00000380469 NRDCO43847 1150 aa18.88■□□□□ 0.61
VPS16-203ENST00000380469 PHKA1P46020 1223 aa18.88■□□□□ 0.61
VPS16-203ENST00000380469 TMC6Q7Z403 805 aa18.88■□□□□ 0.61
VPS16-203ENST00000380469 PHKBQ93100 1093 aa18.88■□□□□ 0.61
VPS16-203ENST00000380469 GOLGA8AA7E2F4 631 aa18.87■□□□□ 0.61
VPS16-203ENST00000380469 IKBKBO14920 756 aa18.87■□□□□ 0.61
VPS16-203ENST00000380469 CDC27P30260 824 aa18.87■□□□□ 0.61
VPS16-203ENST00000380469 PUM3Q15397 648 aaKnown RBP18.87■□□□□ 0.61
VPS16-203ENST00000380469 ALX1Q15699 326 aa18.87■□□□□ 0.61
VPS16-203ENST00000380469 TMEM67Q5HYA8 995 aa18.87■□□□□ 0.61
VPS16-203ENST00000380469 IGDCC4Q8TDY8 1250 aa18.87■□□□□ 0.61
VPS16-203ENST00000380469 LPIN2Q92539 896 aa18.87■□□□□ 0.61
VPS16-203ENST00000380469 STRBPQ96SI9 672 aaKnown RBP18.87■□□□□ 0.61
VPS16-203ENST00000380469 TAOK2Q9UL54 1235 aa18.87■□□□□ 0.61
VPS16-203ENST00000380469 MROH7-TTC4A0A0A0MT08 1334 aa18.87■□□□□ 0.61
VPS16-203ENST00000380469 WWC3Q9ULE0 1092 aa18.86■□□□□ 0.61
VPS16-203ENST00000380469 TCRBV5S4A2TA0A5A2 114 aa18.86■□□□□ 0.61
VPS16-203ENST00000380469 KIF18AQ8NI77 898 aa18.86■□□□□ 0.61
VPS16-203ENST00000380469 CGNQ9P2M7 1197 aaKnown RBP18.86■□□□□ 0.61
VPS16-203ENST00000380469 MROH5Q6ZUA9 1318 aa18.85■□□□□ 0.61
VPS16-203ENST00000380469 PATL2C9JE40 543 aaKnown RBP18.85■□□□□ 0.61
VPS16-203ENST00000380469 CYP19A1P11511 503 aaPredicted RBP18.85■□□□□ 0.61
VPS16-203ENST00000380469 SFPQP23246 707 aaKnown RBP eCLIP18.85■□□□□ 0.61
VPS16-203ENST00000380469 NCAPHQ15003 741 aa18.85■□□□□ 0.61
VPS16-203ENST00000380469 SGMS1Q86VZ5 419 aa18.85■□□□□ 0.61
VPS16-203ENST00000380469 LY9Q9HBG7 655 aa18.85■□□□□ 0.61
VPS16-203ENST00000380469 HPSEQ9Y251 543 aa18.85■□□□□ 0.61
VPS16-203ENST00000380469 U2AF2P26368 475 aaKnown RBP eCLIP18.85■□□□□ 0.61
VPS16-203ENST00000380469 SSRP1Q08945 709 aaKnown RBP18.85■□□□□ 0.61
VPS16-203ENST00000380469 MAP3K12Q12852 859 aa18.85■□□□□ 0.61
VPS16-203ENST00000380469 PTPAQ15257 358 aa18.85■□□□□ 0.61
VPS16-203ENST00000380469 NKX2-3Q8TAU0 364 aa18.85■□□□□ 0.61
VPS16-203ENST00000380469 FEZ1Q99689 392 aa18.85■□□□□ 0.61
VPS16-203ENST00000380469 NAPBQ9H115 298 aa18.85■□□□□ 0.61
VPS16-203ENST00000380469 SENP2Q9HC62 589 aa18.85■□□□□ 0.61
VPS16-203ENST00000380469 TUBE1Q9UJT0 475 aa18.85■□□□□ 0.61
VPS16-203ENST00000380469 SLC12A7Q9Y666 1083 aa18.85■□□□□ 0.61
VPS16-203ENST00000380469 MYH3P11055 1940 aa18.85■□□□□ 0.61
VPS16-203ENST00000380469 XIRP1Q702N8 1843 aaKnown RBP18.85■□□□□ 0.61
VPS16-203ENST00000380469 LIFRP42702 1097 aa18.84■□□□□ 0.61
VPS16-203ENST00000380469 NTRK3Q16288 839 aa18.84■□□□□ 0.61
VPS16-203ENST00000380469 ISM2Q6H9L7 571 aa18.84■□□□□ 0.61
VPS16-203ENST00000380469 SHC4Q6S5L8 630 aa18.84■□□□□ 0.61
VPS16-203ENST00000380469 SPATA5Q8NB90 893 aa18.84■□□□□ 0.61
VPS16-203ENST00000380469 CNNM2Q9H8M5 875 aa18.84■□□□□ 0.61
VPS16-203ENST00000380469 IFIT3O14879 490 aaKnown RBP18.84■□□□□ 0.61
VPS16-203ENST00000380469 CUTAO60888 179 aa18.84■□□□□ 0.61
VPS16-203ENST00000380469 SLC5A1P13866 664 aa18.84■□□□□ 0.61
VPS16-203ENST00000380469 FANCCQ00597 558 aa18.84■□□□□ 0.61
VPS16-203ENST00000380469 RESP18Q5W5W9 173 aa18.84■□□□□ 0.61
VPS16-203ENST00000380469 IFNL3Q8IZI9 196 aa18.84■□□□□ 0.61
VPS16-203ENST00000380469 WASF1Q92558 559 aa18.84■□□□□ 0.61
VPS16-203ENST00000380469 MAP3K14Q99558 947 aa18.84■□□□□ 0.61
VPS16-203ENST00000380469 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.84■□□□□ 0.61
VPS16-203ENST00000380469 FAM237AA0A1B0GTK4 181 aa18.83■□□□□ 0.61
VPS16-203ENST00000380469 SPDYE4A6NLX3 237 aa18.83■□□□□ 0.61
VPS16-203ENST00000380469 ERVV-1B6SEH8 477 aa18.83■□□□□ 0.61
VPS16-203ENST00000380469 LMOD1P29536 600 aaPredicted RBP18.83■□□□□ 0.61
VPS16-203ENST00000380469 HSPA2P54652 639 aa18.83■□□□□ 0.61
VPS16-203ENST00000380469 ARMCX5Q6P1M9 558 aa18.83■□□□□ 0.61
VPS16-203ENST00000380469 MAGEB6Q8N7X4 407 aa18.83■□□□□ 0.61
VPS16-203ENST00000380469 HELBQ8NG08 1087 aaPredicted RBP18.83■□□□□ 0.61
VPS16-203ENST00000380469 SLC26A6Q9BXS9 759 aa18.83■□□□□ 0.61
VPS16-203ENST00000380469 PRDM10Q9NQV6 1147 aa18.83■□□□□ 0.61
VPS16-203ENST00000380469 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.83■□□□□ 0.61
VPS16-203ENST00000380469 CBFA2T2O43439 604 aa18.83■□□□□ 0.6
VPS16-203ENST00000380469 OLFM4Q6UX06 510 aa18.83■□□□□ 0.6
VPS16-203ENST00000380469 KRT23Q9C075 422 aa18.83■□□□□ 0.6
VPS16-203ENST00000380469 ZSWIM5Q9P217 1185 aa18.83■□□□□ 0.6
VPS16-203ENST00000380469 ZBTB1Q9Y2K1 713 aa18.83■□□□□ 0.6
VPS16-203ENST00000380469 UBN2Q6ZU65 1347 aa18.82■□□□□ 0.6
VPS16-203ENST00000380469 STK36Q9NRP7 1315 aa18.82■□□□□ 0.6
VPS16-203ENST00000380469 RANBP6O60518 1105 aaKnown RBP18.82■□□□□ 0.6
VPS16-203ENST00000380469 MBD4O95243 580 aa18.82■□□□□ 0.6
VPS16-203ENST00000380469 FGFR2P21802 821 aa18.82■□□□□ 0.6
VPS16-203ENST00000380469 DZIP3Q86Y13 1208 aaKnown RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms