RNA–Protein interactions for RNA: ENST00000380097.7

TRIM6-202, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 3,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-202ENST00000380097 PIP4K2AP48426 406 aaPredicted RBP8.31□□□□□ -1.08
TRIM6-202ENST00000380097 VSNL1P62760 191 aa8.31□□□□□ -1.08
TRIM6-202ENST00000380097 NCAPHQ15003 741 aa8.31□□□□□ -1.08
TRIM6-202ENST00000380097 NBPF6Q5VWK0 638 aa8.31□□□□□ -1.08
TRIM6-202ENST00000380097 PPFIBP1Q86W92 1011 aa8.31□□□□□ -1.08
TRIM6-202ENST00000380097 FAM76AQ8TAV0 307 aa8.31□□□□□ -1.08
TRIM6-202ENST00000380097 NBPF4Q96M43 638 aa8.31□□□□□ -1.08
TRIM6-202ENST00000380097 ALDH8A1Q9H2A2 487 aaPredicted RBP8.31□□□□□ -1.08
TRIM6-202ENST00000380097 FANCLQ9NW38 375 aa8.31□□□□□ -1.08
TRIM6-202ENST00000380097 HOOK1Q9UJC3 728 aaKnown RBP8.31□□□□□ -1.08
TRIM6-202ENST00000380097 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.31□□□□□ -1.08
TRIM6-202ENST00000380097 NF2P35240 595 aa8.31□□□□□ -1.08
TRIM6-202ENST00000380097 SYKP43405 635 aa8.31□□□□□ -1.08
TRIM6-202ENST00000380097 USP5P45974 858 aa8.31□□□□□ -1.08
TRIM6-202ENST00000380097 TUBB2AQ13885 445 aa8.31□□□□□ -1.08
TRIM6-202ENST00000380097 LRCH2Q5VUJ6 765 aa8.31□□□□□ -1.08
TRIM6-202ENST00000380097 SPECC1LQ69YQ0 1117 aa8.31□□□□□ -1.08
TRIM6-202ENST00000380097 CPLX3Q8WVH0 158 aa8.31□□□□□ -1.08
TRIM6-202ENST00000380097 TUBB2BQ9BVA1 445 aa8.31□□□□□ -1.08
TRIM6-202ENST00000380097 ZBTB12Q9Y330 459 aaPredicted RBP8.31□□□□□ -1.08
TRIM6-202ENST00000380097 ARHGEF10O15013 1369 aa8.31□□□□□ -1.08
TRIM6-202ENST00000380097 EXOC5O00471 708 aa8.31□□□□□ -1.08
TRIM6-202ENST00000380097 PPP2R5AQ15172 486 aa8.31□□□□□ -1.08
TRIM6-202ENST00000380097 BCAS4Q8TDM0 211 aa8.31□□□□□ -1.08
TRIM6-202ENST00000380097 KIFC2Q96AC6 838 aa8.31□□□□□ -1.08
TRIM6-202ENST00000380097 PHAXQ9H814 394 aaKnown RBP8.31□□□□□ -1.08
TRIM6-202ENST00000380097 RAB21Q9UL25 225 aa8.31□□□□□ -1.08
TRIM6-202ENST00000380097 PA2G4Q9UQ80 394 aaKnown RBP8.31□□□□□ -1.08
TRIM6-202ENST00000380097 CAPN7Q9Y6W3 813 aa8.31□□□□□ -1.08
TRIM6-202ENST00000380097 ADAMTS2O95450 1211 aa8.3□□□□□ -1.08
TRIM6-202ENST00000380097 MCM3P25205 808 aa8.3□□□□□ -1.08
TRIM6-202ENST00000380097 TEFQ10587 303 aa8.3□□□□□ -1.08
TRIM6-202ENST00000380097 OTUD6BQ8N6M0 293 aa8.3□□□□□ -1.08
TRIM6-202ENST00000380097 NSUN7Q8NE18 718 aaKnown RBP8.3□□□□□ -1.08
TRIM6-202ENST00000380097 CENPHQ9H3R5 247 aa8.3□□□□□ -1.08
TRIM6-202ENST00000380097 RTEL1Q9NZ71 1219 aa8.3□□□□□ -1.08
TRIM6-202ENST00000380097 GCP02774 474 aa8.3□□□□□ -1.08
TRIM6-202ENST00000380097 MSL3Q8N5Y2 521 aaKnown RBP8.3□□□□□ -1.08
TRIM6-202ENST00000380097 MSANTD4Q8NCY6 345 aa8.3□□□□□ -1.08
TRIM6-202ENST00000380097 NCOA5Q9HCD5 579 aaKnown RBP8.3□□□□□ -1.08
TRIM6-202ENST00000380097 CPS1P31327 1500 aa8.29□□□□□ -1.08
TRIM6-202ENST00000380097 GOLGA6CA6NDK9 693 aa8.29□□□□□ -1.08
TRIM6-202ENST00000380097 GOLGA6DP0CG33 693 aa8.29□□□□□ -1.08
TRIM6-202ENST00000380097 MARCKSP29966 332 aaPredicted RBP8.29□□□□□ -1.08
TRIM6-202ENST00000380097 STIM1Q13586 685 aa8.29□□□□□ -1.08
TRIM6-202ENST00000380097 IGSF22Q8N9C0 903 aa8.29□□□□□ -1.08
TRIM6-202ENST00000380097 LINC00301Q8NCQ3 95 aa8.29□□□□□ -1.08
TRIM6-202ENST00000380097 C8orf76Q96K31 380 aa8.29□□□□□ -1.08
TRIM6-202ENST00000380097 CABS1Q96KC9 395 aa8.29□□□□□ -1.08
TRIM6-202ENST00000380097 GDAP1L1Q96MZ0 367 aa8.29□□□□□ -1.08
TRIM6-202ENST00000380097 SEC62Q99442 399 aaKnown RBP8.29□□□□□ -1.08
TRIM6-202ENST00000380097 GOLGA6AQ9NYA3 693 aa8.29□□□□□ -1.08
TRIM6-202ENST00000380097 CLIC4Q9Y696 253 aa8.29□□□□□ -1.08
TRIM6-202ENST00000380097 U3KPZ7 1027 aaPredicted RBP8.29□□□□□ -1.08
TRIM6-202ENST00000380097 CEP170BQ9Y4F5 1589 aaPredicted RBP8.29□□□□□ -1.08
TRIM6-202ENST00000380097 LRRIQ3A6PVS8 624 aaPredicted RBP8.29□□□□□ -1.08
TRIM6-202ENST00000380097 AKR1B15C9JRZ8 316 aaPredicted RBP8.29□□□□□ -1.08
TRIM6-202ENST00000380097 PFKFB2O60825 505 aa8.29□□□□□ -1.08
TRIM6-202ENST00000380097 HMGB1P09429 215 aaKnown RBP8.29□□□□□ -1.08
TRIM6-202ENST00000380097 PFKFB1P16118 471 aa8.29□□□□□ -1.08
TRIM6-202ENST00000380097 CDR1P51861 262 aa8.29□□□□□ -1.08
TRIM6-202ENST00000380097 PLEKHO1Q53GL0 409 aaPredicted RBP8.29□□□□□ -1.08
TRIM6-202ENST00000380097 ZNF589Q86UQ0 364 aaPredicted RBP8.29□□□□□ -1.08
TRIM6-202ENST00000380097 USP42Q9H9J4 1324 aaKnown RBP8.29□□□□□ -1.08
TRIM6-202ENST00000380097 PI4KAP2A4QPH2 592 aa8.29□□□□□ -1.08
TRIM6-202ENST00000380097 CPLX1O14810 134 aa8.29□□□□□ -1.08
TRIM6-202ENST00000380097 MAP2K1Q02750 393 aaPredicted RBP8.29□□□□□ -1.08
TRIM6-202ENST00000380097 NEDD9Q14511 834 aa8.29□□□□□ -1.08
TRIM6-202ENST00000380097 OTUD7BQ6GQQ9 843 aa8.29□□□□□ -1.08
TRIM6-202ENST00000380097 PI4KAP1Q8N8J0 262 aa8.29□□□□□ -1.08
TRIM6-202ENST00000380097 JMYQ8N9B5 988 aa8.29□□□□□ -1.08
TRIM6-202ENST00000380097 SMARCC2Q8TAQ2 1214 aa8.29□□□□□ -1.08
TRIM6-202ENST00000380097 RNF217Q8TC41 542 aa8.29□□□□□ -1.08
TRIM6-202ENST00000380097 KAT2BQ92831 832 aa8.29□□□□□ -1.08
TRIM6-202ENST00000380097 NAPGQ99747 312 aaPredicted RBP8.29□□□□□ -1.08
TRIM6-202ENST00000380097 MRPL44Q9H9J2 332 aaKnown RBP8.29□□□□□ -1.08
TRIM6-202ENST00000380097 ARHGEF28Q8N1W1 1705 aaKnown RBP8.28□□□□□ -1.08
TRIM6-202ENST00000380097 MYO1BO43795 1136 aa8.28□□□□□ -1.08
TRIM6-202ENST00000380097 YEATS4O95619 227 aa8.28□□□□□ -1.08
TRIM6-202ENST00000380097 TRDNQ13061 729 aa8.28□□□□□ -1.08
TRIM6-202ENST00000380097 WHAMMP3Q1A5X7 153 aa8.28□□□□□ -1.08
TRIM6-202ENST00000380097 CADPS2Q86UW7 1296 aa8.28□□□□□ -1.08
TRIM6-202ENST00000380097 RUFY1Q96T51 708 aa8.28□□□□□ -1.08
TRIM6-202ENST00000380097 UBR1Q8IWV7 1749 aa8.28□□□□□ -1.08
TRIM6-202ENST00000380097 ATP7BP35670 1465 aa8.28□□□□□ -1.08
TRIM6-202ENST00000380097 SOWAHDA6NJG2 315 aa8.28□□□□□ -1.08
TRIM6-202ENST00000380097 TAF5LO75529 589 aa8.28□□□□□ -1.08
TRIM6-202ENST00000380097 MTF1Q14872 753 aa8.28□□□□□ -1.08
TRIM6-202ENST00000380097 CCDC70Q6NSX1 233 aa8.28□□□□□ -1.08
TRIM6-202ENST00000380097 ZNF530Q6P9A1 599 aaPredicted RBP8.28□□□□□ -1.08
TRIM6-202ENST00000380097 DHX32Q7L7V1 743 aaKnown RBP8.28□□□□□ -1.08
TRIM6-202ENST00000380097 PRDM11Q9NQV5 511 aa8.28□□□□□ -1.08
TRIM6-202ENST00000380097 GNL3LQ9NVN8 582 aaKnown RBP8.28□□□□□ -1.08
TRIM6-202ENST00000380097 NDUFAB1O14561 156 aa8.28□□□□□ -1.08
TRIM6-202ENST00000380097 NEBLO76041 1014 aa8.28□□□□□ -1.08
TRIM6-202ENST00000380097 CMA1P23946 247 aa8.28□□□□□ -1.08
TRIM6-202ENST00000380097 EVA1CP58658 441 aa8.28□□□□□ -1.08
TRIM6-202ENST00000380097 SEMA3FQ13275 785 aa8.28□□□□□ -1.08
TRIM6-202ENST00000380097 BIRC2Q13490 618 aa8.28□□□□□ -1.08
TRIM6-202ENST00000380097 PNOCQ13519 176 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms