RNA–Protein interactions for RNA: ENST00000380071.7

RFC3-201, Transcript of replication factor C subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC3, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-201ENST00000380071 CCDC69A6NI79 296 aa14.11□□□□□ -0.15
RFC3-201ENST00000380071 SLC3A2P08195 630 aaKnown RBP14.11□□□□□ -0.15
RFC3-201ENST00000380071 SKILP12757 684 aa14.11□□□□□ -0.15
RFC3-201ENST00000380071 KRT40Q6A162 431 aa14.11□□□□□ -0.15
RFC3-201ENST00000380071 DZIP3Q86Y13 1208 aaKnown RBP14.11□□□□□ -0.15
RFC3-201ENST00000380071 FGFR2P21802 821 aa14.1□□□□□ -0.15
RFC3-201ENST00000380071 CMA1P23946 247 aa14.1□□□□□ -0.15
RFC3-201ENST00000380071 RBM6P78332 1123 aaKnown RBP14.1□□□□□ -0.15
RFC3-201ENST00000380071 CTDSPL2Q05D32 466 aa14.1□□□□□ -0.15
RFC3-201ENST00000380071 SLC39A14Q15043 492 aa14.1□□□□□ -0.15
RFC3-201ENST00000380071 VPS37DQ86XT2 251 aa14.1□□□□□ -0.15
RFC3-201ENST00000380071 AIDAQ96BJ3 306 aa14.1□□□□□ -0.15
RFC3-201ENST00000380071 FAM217BQ9NTX9 383 aaPredicted RBP14.1□□□□□ -0.15
RFC3-201ENST00000380071 MROH7-TTC4A0A0A0MT08 1334 aa14.1□□□□□ -0.15
RFC3-201ENST00000380071 CCZ1BP86790 482 aa14.1□□□□□ -0.15
RFC3-201ENST00000380071 CCZ1P86791 482 aaPredicted RBP14.1□□□□□ -0.15
RFC3-201ENST00000380071 NTRK3Q16288 839 aa14.1□□□□□ -0.15
RFC3-201ENST00000380071 LPIN2Q92539 896 aa14.1□□□□□ -0.15
RFC3-201ENST00000380071 LY9Q9HBG7 655 aa14.1□□□□□ -0.15
RFC3-201ENST00000380071 EPB41L4AQ9HCS5 686 aaPredicted RBP14.1□□□□□ -0.15
RFC3-201ENST00000380071 ZSWIM5Q9P217 1185 aa14.1□□□□□ -0.15
RFC3-201ENST00000380071 BCL9O00512 1426 aa14.09□□□□□ -0.15
RFC3-201ENST00000380071 ATRNO75882 1429 aa14.09□□□□□ -0.15
RFC3-201ENST00000380071 RANBP6O60518 1105 aaKnown RBP14.09□□□□□ -0.15
RFC3-201ENST00000380071 PUM3Q15397 648 aaKnown RBP14.09□□□□□ -0.15
RFC3-201ENST00000380071 ZRSR1Q15695 479 aaKnown RBP14.09□□□□□ -0.15
RFC3-201ENST00000380071 NFXL1Q6ZNB6 911 aa14.09□□□□□ -0.15
RFC3-201ENST00000380071 MAGEB6Q8N7X4 407 aa14.09□□□□□ -0.15
RFC3-201ENST00000380071 MYH3P11055 1940 aa14.09□□□□□ -0.15
RFC3-201ENST00000380071 PATL2C9JE40 543 aaKnown RBP14.09□□□□□ -0.15
RFC3-201ENST00000380071 ZBTB43O43298 467 aa14.09□□□□□ -0.15
RFC3-201ENST00000380071 UQCRFS1P1P0C7P4 283 aa14.09□□□□□ -0.15
RFC3-201ENST00000380071 NLRP12P59046 1061 aa14.09□□□□□ -0.15
RFC3-201ENST00000380071 ZNF34Q8IZ26 560 aa14.09□□□□□ -0.15
RFC3-201ENST00000380071 IFNL3Q8IZI9 196 aa14.09□□□□□ -0.15
RFC3-201ENST00000380071 SPATA5Q8NB90 893 aa14.09□□□□□ -0.15
RFC3-201ENST00000380071 ZNF592Q92610 1267 aa14.09□□□□□ -0.15
RFC3-201ENST00000380071 BCL11BQ9C0K0 894 aaPredicted RBP14.09□□□□□ -0.15
RFC3-201ENST00000380071 SEC31BQ9NQW1 1179 aa14.09□□□□□ -0.15
RFC3-201ENST00000380071 TRMT1Q9NXH9 659 aaKnown RBP14.09□□□□□ -0.15
RFC3-201ENST00000380071 NUP98P52948 1817 aa14.08□□□□□ -0.15
RFC3-201ENST00000380071 SMTNL1A8MU46 457 aa14.08□□□□□ -0.16
RFC3-201ENST00000380071 NEMFO60524 1076 aa14.08□□□□□ -0.16
RFC3-201ENST00000380071 RASGRF1Q13972 1273 aa14.08□□□□□ -0.16
RFC3-201ENST00000380071 PTPAQ15257 358 aa14.08□□□□□ -0.16
RFC3-201ENST00000380071 TMEM67Q5HYA8 995 aa14.08□□□□□ -0.16
RFC3-201ENST00000380071 PPP4R3BQ5MIZ7 849 aa14.08□□□□□ -0.16
RFC3-201ENST00000380071 SHC4Q6S5L8 630 aa14.08□□□□□ -0.16
RFC3-201ENST00000380071 CLIC6Q96NY7 704 aa14.08□□□□□ -0.16
RFC3-201ENST00000380071 XPO4Q9C0E2 1151 aaKnown RBP14.08□□□□□ -0.16
RFC3-201ENST00000380071 ARMT1Q9H993 441 aa14.08□□□□□ -0.16
RFC3-201ENST00000380071 LRP6O75581 1613 aa14.08□□□□□ -0.16
RFC3-201ENST00000380071 ERVV-1B6SEH8 477 aa14.07□□□□□ -0.16
RFC3-201ENST00000380071 PRKAB2O43741 272 aa14.07□□□□□ -0.16
RFC3-201ENST00000380071 CDKL5O76039 1030 aa14.07□□□□□ -0.16
RFC3-201ENST00000380071 MBD4O95243 580 aa14.07□□□□□ -0.16
RFC3-201ENST00000380071 IARSP41252 1262 aaKnown RBP14.07□□□□□ -0.16
RFC3-201ENST00000380071 NAA30Q147X3 362 aaPredicted RBP14.07□□□□□ -0.16
RFC3-201ENST00000380071 NCAPHQ15003 741 aa14.07□□□□□ -0.16
RFC3-201ENST00000380071 SUSD4Q5VX71 490 aa14.07□□□□□ -0.16
RFC3-201ENST00000380071 CEP135Q66GS9 1140 aa14.07□□□□□ -0.16
RFC3-201ENST00000380071 STK11IPQ8N1F8 1099 aa14.07□□□□□ -0.16
RFC3-201ENST00000380071 ANKRD7Q92527 254 aa14.07□□□□□ -0.16
RFC3-201ENST00000380071 TMEM87BQ96K49 555 aa14.07□□□□□ -0.16
RFC3-201ENST00000380071 MAP3K14Q99558 947 aa14.07□□□□□ -0.16
RFC3-201ENST00000380071 BPIFA3Q9BQP9 254 aa14.07□□□□□ -0.16
RFC3-201ENST00000380071 IFNKQ9P0W0 207 aa14.07□□□□□ -0.16
RFC3-201ENST00000380071 SLIT2O94813 1529 aa14.07□□□□□ -0.16
RFC3-201ENST00000380071 MROH5Q6ZUA9 1318 aa14.07□□□□□ -0.16
RFC3-201ENST00000380071 GOLGA8AA7E2F4 631 aa14.07□□□□□ -0.16
RFC3-201ENST00000380071 SMC2O95347 1197 aa14.07□□□□□ -0.16
RFC3-201ENST00000380071 SYKP43405 635 aa14.07□□□□□ -0.16
RFC3-201ENST00000380071 GNL2Q13823 731 aaKnown RBP14.07□□□□□ -0.16
RFC3-201ENST00000380071 NAPBQ9H115 298 aa14.07□□□□□ -0.16
RFC3-201ENST00000380071 PRDM10Q9NQV6 1147 aa14.07□□□□□ -0.16
RFC3-201ENST00000380071 IL6STP40189 918 aaPredicted RBP14.06□□□□□ -0.16
RFC3-201ENST00000380071 ALX1Q15699 326 aa14.06□□□□□ -0.16
RFC3-201ENST00000380071 ZKSCAN3Q9BRR0 538 aa14.06□□□□□ -0.16
RFC3-201ENST00000380071 SLC26A6Q9BXS9 759 aa14.06□□□□□ -0.16
RFC3-201ENST00000380071 PRDM4Q9UKN5 801 aa14.06□□□□□ -0.16
RFC3-201ENST00000380071 PAXBP1Q9Y5B6 917 aa14.06□□□□□ -0.16
RFC3-201ENST00000380071 GSG1L2A8MUP6 293 aa14.06□□□□□ -0.16
RFC3-201ENST00000380071 EXOC5O00471 708 aa14.06□□□□□ -0.16
RFC3-201ENST00000380071 IFIT3O14879 490 aaKnown RBP14.06□□□□□ -0.16
RFC3-201ENST00000380071 GUCY1A2P33402 732 aa14.06□□□□□ -0.16
RFC3-201ENST00000380071 CPLX2Q6PUV4 134 aaKnown RBP14.06□□□□□ -0.16
RFC3-201ENST00000380071 SGMS1Q86VZ5 419 aa14.06□□□□□ -0.16
RFC3-201ENST00000380071 PDCL2Q8N4E4 241 aa14.06□□□□□ -0.16
RFC3-201ENST00000380071 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.06□□□□□ -0.16
RFC3-201ENST00000380071 HPSEQ9Y251 543 aa14.06□□□□□ -0.16
RFC3-201ENST00000380071 ANKRD36CQ5JPF3 1778 aa14.06□□□□□ -0.16
RFC3-201ENST00000380071 PPP6R2O75170 966 aa14.05□□□□□ -0.16
RFC3-201ENST00000380071 SLC5A1P13866 664 aa14.05□□□□□ -0.16
RFC3-201ENST00000380071 U2AF2P26368 475 aaKnown RBP eCLIP14.05□□□□□ -0.162e-14■■■□□ 18.9
RFC3-201ENST00000380071 BCAMP50895 628 aa14.05□□□□□ -0.16
RFC3-201ENST00000380071 NCBP1Q09161 790 aaKnown RBP14.05□□□□□ -0.16
RFC3-201ENST00000380071 MAP3K12Q12852 859 aa14.05□□□□□ -0.16
RFC3-201ENST00000380071 NYAP1Q6ZVC0 841 aa14.05□□□□□ -0.16
RFC3-201ENST00000380071 TMC6Q7Z403 805 aa14.05□□□□□ -0.16
RFC3-201ENST00000380071 SMAP1Q8IYB5 467 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms