RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 DCTN1Q14203 1278 aa9.63□□□□□ -0.87
NHLRC3-201ENST00000379599 KRT24Q2M2I5 525 aa9.63□□□□□ -0.87
NHLRC3-201ENST00000379599 CCDC178Q5BJE1 867 aa9.63□□□□□ -0.87
NHLRC3-201ENST00000379599 AKNAD1Q5T1N1 836 aa9.63□□□□□ -0.87
NHLRC3-201ENST00000379599 ARMC9Q7Z3E5 817 aa9.63□□□□□ -0.87
NHLRC3-201ENST00000379599 IL25Q9H293 177 aa9.63□□□□□ -0.87
NHLRC3-201ENST00000379599 SH2B1Q9NRF2 756 aaPredicted RBP9.63□□□□□ -0.87
NHLRC3-201ENST00000379599 EIF4G3O43432 1585 aaKnown RBP9.62□□□□□ -0.87
NHLRC3-201ENST00000379599 A2MP01023 1474 aa9.62□□□□□ -0.87
NHLRC3-201ENST00000379599 A0A1B0GVG6 124 aa9.62□□□□□ -0.87
NHLRC3-201ENST00000379599 SLC4A2P04920 1241 aa9.62□□□□□ -0.87
NHLRC3-201ENST00000379599 FOSBP53539 338 aa9.62□□□□□ -0.87
NHLRC3-201ENST00000379599 TUBB4BP68371 445 aa9.62□□□□□ -0.87
NHLRC3-201ENST00000379599 PDIA5Q14554 519 aa9.62□□□□□ -0.87
NHLRC3-201ENST00000379599 ACBD5Q5T8D3 534 aaPredicted RBP9.62□□□□□ -0.87
NHLRC3-201ENST00000379599 GSPT2Q8IYD1 628 aaKnown RBP9.62□□□□□ -0.87
NHLRC3-201ENST00000379599 COG1Q8WTW3 980 aa9.62□□□□□ -0.87
NHLRC3-201ENST00000379599 IL17RAQ96F46 866 aa9.62□□□□□ -0.87
NHLRC3-201ENST00000379599 ALS2CR12Q96Q35 445 aa9.62□□□□□ -0.87
NHLRC3-201ENST00000379599 FAM167BQ9BTA0 163 aa9.62□□□□□ -0.87
NHLRC3-201ENST00000379599 FANCLQ9NW38 375 aa9.62□□□□□ -0.87
NHLRC3-201ENST00000379599 ABCC4O15439 1325 aa9.62□□□□□ -0.87
NHLRC3-201ENST00000379599 ERICH2A1L162 156 aa9.62□□□□□ -0.87
NHLRC3-201ENST00000379599 MAGEA10P43363 369 aaPredicted RBP9.62□□□□□ -0.87
NHLRC3-201ENST00000379599 MTX1Q13505 466 aa9.62□□□□□ -0.87
NHLRC3-201ENST00000379599 PLCB4Q15147 1175 aa9.62□□□□□ -0.87
NHLRC3-201ENST00000379599 UNC5CLQ8IV45 518 aa9.62□□□□□ -0.87
NHLRC3-201ENST00000379599 ARHGEF1Q92888 912 aaKnown RBP9.62□□□□□ -0.87
NHLRC3-201ENST00000379599 TSPAN18Q96SJ8 248 aa9.62□□□□□ -0.87
NHLRC3-201ENST00000379599 HINFPQ9BQA5 517 aa9.62□□□□□ -0.87
NHLRC3-201ENST00000379599 CTAGE9A4FU28 777 aa9.62□□□□□ -0.87
NHLRC3-201ENST00000379599 GOLGA6L10A6NI86 522 aa9.62□□□□□ -0.87
NHLRC3-201ENST00000379599 H3BQV1 296 aa9.62□□□□□ -0.87
NHLRC3-201ENST00000379599 ATP6V1G1O75348 118 aa9.62□□□□□ -0.87
NHLRC3-201ENST00000379599 VAMP4O75379 141 aa9.62□□□□□ -0.87
NHLRC3-201ENST00000379599 SMNDC1O75940 238 aaKnown RBP eCLIP9.62□□□□□ -0.87
NHLRC3-201ENST00000379599 ADKP55263 362 aaKnown RBP9.62□□□□□ -0.87
NHLRC3-201ENST00000379599 STK3Q13188 491 aa9.62□□□□□ -0.87
NHLRC3-201ENST00000379599 ENOX2Q16206 610 aaKnown RBP9.62□□□□□ -0.87
NHLRC3-201ENST00000379599 IFFO2Q5TF58 517 aa9.62□□□□□ -0.87
NHLRC3-201ENST00000379599 MEX3CQ5U5Q3 659 aaKnown RBP9.62□□□□□ -0.87
NHLRC3-201ENST00000379599 SYCP3Q8IZU3 236 aa9.62□□□□□ -0.87
NHLRC3-201ENST00000379599 FSIP1Q8NA03 581 aa9.62□□□□□ -0.87
NHLRC3-201ENST00000379599 DPF2Q92785 391 aa9.62□□□□□ -0.87
NHLRC3-201ENST00000379599 FAM135BQ49AJ0 1406 aa9.61□□□□□ -0.87
NHLRC3-201ENST00000379599 ROR2Q01974 943 aaKnown RBP9.61□□□□□ -0.87
NHLRC3-201ENST00000379599 PPARDQ03181 441 aa9.61□□□□□ -0.87
NHLRC3-201ENST00000379599 SETDB1Q15047 1291 aa9.61□□□□□ -0.87
NHLRC3-201ENST00000379599 SPECC1Q5M775 1068 aa9.61□□□□□ -0.87
NHLRC3-201ENST00000379599 MAGEC3Q8TD91 643 aa9.61□□□□□ -0.87
NHLRC3-201ENST00000379599 RUFY1Q96T51 708 aa9.61□□□□□ -0.87
NHLRC3-201ENST00000379599 PHACTR1Q9C0D0 580 aa9.61□□□□□ -0.87
NHLRC3-201ENST00000379599 GOLPH3LQ9H4A5 285 aa9.61□□□□□ -0.87
NHLRC3-201ENST00000379599 MYO1AQ9UBC5 1043 aa9.61□□□□□ -0.87
NHLRC3-201ENST00000379599 CYP46A1Q9Y6A2 500 aa9.61□□□□□ -0.87
NHLRC3-201ENST00000379599 ATXN2Q99700 1313 aaKnown RBP9.61□□□□□ -0.87
NHLRC3-201ENST00000379599 A0A1B0GVL5 298 aa9.61□□□□□ -0.87
NHLRC3-201ENST00000379599 CBFA2T2O43439 604 aa9.61□□□□□ -0.87
NHLRC3-201ENST00000379599 FERP16591 822 aa9.61□□□□□ -0.87
NHLRC3-201ENST00000379599 PIP4K2BP78356 416 aa9.61□□□□□ -0.87
NHLRC3-201ENST00000379599 HSP90AA4PQ58FG1 418 aa9.61□□□□□ -0.87
NHLRC3-201ENST00000379599 NAA35Q5VZE5 725 aa9.61□□□□□ -0.87
NHLRC3-201ENST00000379599 Q6ZUG5 572 aa9.61□□□□□ -0.87
NHLRC3-201ENST00000379599 MTRQ99707 1265 aa9.61□□□□□ -0.87
NHLRC3-201ENST00000379599 MRPL44Q9H9J2 332 aaKnown RBP9.61□□□□□ -0.87
NHLRC3-201ENST00000379599 CFAP45Q9UL16 551 aa9.61□□□□□ -0.87
NHLRC3-201ENST00000379599 CORO1CQ9ULV4 474 aaPredicted RBP9.61□□□□□ -0.87
NHLRC3-201ENST00000379599 SPG7Q9UQ90 795 aa9.61□□□□□ -0.87
NHLRC3-201ENST00000379599 TMEM232C9JQI7 657 aa9.6□□□□□ -0.87
NHLRC3-201ENST00000379599 PFKFB2O60825 505 aa9.6□□□□□ -0.87
NHLRC3-201ENST00000379599 TSPY4P0CV99 314 aa9.6□□□□□ -0.87
NHLRC3-201ENST00000379599 TSPY10P0CW01 314 aa9.6□□□□□ -0.87
NHLRC3-201ENST00000379599 ME1P48163 572 aa9.6□□□□□ -0.87
NHLRC3-201ENST00000379599 MSL1Q68DK7 614 aa9.6□□□□□ -0.87
NHLRC3-201ENST00000379599 RBM41Q96IZ5 413 aaKnown RBP9.6□□□□□ -0.87
NHLRC3-201ENST00000379599 MMTAG2Q9BU76 263 aaKnown RBP9.6□□□□□ -0.87
NHLRC3-201ENST00000379599 IQCGQ9H095 443 aaKnown RBP9.6□□□□□ -0.87
NHLRC3-201ENST00000379599 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.6□□□□□ -0.87
NHLRC3-201ENST00000379599 RNF8O76064 485 aa9.6□□□□□ -0.87
NHLRC3-201ENST00000379599 ANP32DO95626 131 aa9.6□□□□□ -0.87
NHLRC3-201ENST00000379599 CCDC175P0C221 793 aa9.6□□□□□ -0.87
NHLRC3-201ENST00000379599 CD151P48509 253 aa9.6□□□□□ -0.87
NHLRC3-201ENST00000379599 CUL3Q13618 768 aa9.6□□□□□ -0.87
NHLRC3-201ENST00000379599 ZNF473Q8WTR7 871 aaKnown RBP9.6□□□□□ -0.87
NHLRC3-201ENST00000379599 NUP58Q9BVL2 599 aa9.6□□□□□ -0.87
NHLRC3-201ENST00000379599 OSBPL3Q9H4L5 887 aa9.6□□□□□ -0.87
NHLRC3-201ENST00000379599 NOD2Q9HC29 1040 aa9.6□□□□□ -0.87
NHLRC3-201ENST00000379599 SHANK2Q9UPX8 1470 aa9.6□□□□□ -0.87
NHLRC3-201ENST00000379599 ATP5JP18859 108 aa9.6□□□□□ -0.87
NHLRC3-201ENST00000379599 CTCFP49711 727 aaPredicted RBP9.6□□□□□ -0.87
NHLRC3-201ENST00000379599 SEC24CP53992 1094 aa9.6□□□□□ -0.87
NHLRC3-201ENST00000379599 IFFO1Q0D2I5 559 aa9.6□□□□□ -0.87
NHLRC3-201ENST00000379599 MTF1Q14872 753 aa9.6□□□□□ -0.87
NHLRC3-201ENST00000379599 KCTD16Q68DU8 428 aa9.6□□□□□ -0.87
NHLRC3-201ENST00000379599 NCAPH2Q6IBW4 605 aa9.6□□□□□ -0.87
NHLRC3-201ENST00000379599 YTHDF3Q7Z739 585 aaKnown RBP9.6□□□□□ -0.87
NHLRC3-201ENST00000379599 ACTR5Q9H9F9 607 aaPredicted RBP9.6□□□□□ -0.87
NHLRC3-201ENST00000379599 IQGAP2Q13576 1575 aa9.59□□□□□ -0.87
NHLRC3-201ENST00000379599 SSH2Q76I76 1423 aa9.59□□□□□ -0.87
NHLRC3-201ENST00000379599 PRG4Q92954 1404 aaPredicted RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms