RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 CYP7A1P22680 504 aa22.73■■□□□ 1.23
SSU72-203ENST00000378725 BTDP43251 543 aa22.73■■□□□ 1.23
SSU72-203ENST00000378725 PPP4CP60510 307 aa22.73■■□□□ 1.23
SSU72-203ENST00000378725 SLC9C2Q5TAH2 1124 aa22.73■■□□□ 1.23
SSU72-203ENST00000378725 FKBP1CQ5VVH2 108 aa22.73■■□□□ 1.23
SSU72-203ENST00000378725 ADGRA1Q86SQ6 560 aa22.73■■□□□ 1.23
SSU72-203ENST00000378725 KBTBD3Q8NAB2 608 aa22.73■■□□□ 1.23
SSU72-203ENST00000378725 USP40Q9NVE5 1235 aa22.73■■□□□ 1.23
SSU72-203ENST00000378725 SCAF8Q9UPN6 1271 aaKnown RBP22.73■■□□□ 1.23
SSU72-203ENST00000378725 PDE6AP16499 860 aa22.72■■□□□ 1.23
SSU72-203ENST00000378725 RHBDL3P58872 404 aa22.72■■□□□ 1.23
SSU72-203ENST00000378725 DLK2Q6UY11 383 aa22.72■■□□□ 1.23
SSU72-203ENST00000378725 DEFB129Q9H1M3 183 aa22.72■■□□□ 1.23
SSU72-203ENST00000378725 VEZTQ9HBM0 779 aa22.72■■□□□ 1.23
SSU72-203ENST00000378725 TCRBV5S4A2TA0A5A2 114 aa22.71■■□□□ 1.23
SSU72-203ENST00000378725 FMR1Q06787 632 aaKnown RBP eCLIP22.71■■□□□ 1.232e-7■■■■■ 26.8
SSU72-203ENST00000378725 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.71■■□□□ 1.23
SSU72-203ENST00000378725 TMOD2Q9NZR1 351 aa22.71■■□□□ 1.23
SSU72-203ENST00000378725 PPP2R3BQ9Y5P8 575 aa22.71■■□□□ 1.23
SSU72-203ENST00000378725 DOCK2Q92608 1830 aa22.71■■□□□ 1.23
SSU72-203ENST00000378725 BAG3O95817 575 aa22.7■■□□□ 1.22
SSU72-203ENST00000378725 ADD2P35612 726 aa22.7■■□□□ 1.22
SSU72-203ENST00000378725 TNFAIP1Q13829 316 aa22.7■■□□□ 1.22
SSU72-203ENST00000378725 IDI2Q9BXS1 227 aa22.7■■□□□ 1.22
SSU72-203ENST00000378725 MYH2Q9UKX2 1941 aa22.69■■□□□ 1.22
SSU72-203ENST00000378725 ZNF532Q9HCE3 1301 aa22.69■■□□□ 1.22
SSU72-203ENST00000378725 TCP10L2B9ZVM9 353 aa22.69■■□□□ 1.22
SSU72-203ENST00000378725 CACNB3P54284 484 aa22.69■■□□□ 1.22
SSU72-203ENST00000378725 RASA3Q14644 834 aa22.69■■□□□ 1.22
SSU72-203ENST00000378725 UBE3CQ15386 1083 aa22.69■■□□□ 1.22
SSU72-203ENST00000378725 ZSCAN25Q6NSZ9 544 aa22.69■■□□□ 1.22
SSU72-203ENST00000378725 FAM83AQ86UY5 434 aa22.69■■□□□ 1.22
SSU72-203ENST00000378725 CDCA5Q96FF9 252 aa22.69■■□□□ 1.22
SSU72-203ENST00000378725 MAST2Q6P0Q8 1798 aa22.68■■□□□ 1.22
SSU72-203ENST00000378725 CNTNAP1P78357 1384 aa22.68■■□□□ 1.22
SSU72-203ENST00000378725 TNNI2P48788 182 aa22.68■■□□□ 1.22
SSU72-203ENST00000378725 APLP1P51693 650 aa22.68■■□□□ 1.22
SSU72-203ENST00000378725 CST9Q5W186 159 aa22.68■■□□□ 1.22
SSU72-203ENST00000378725 EVI5LQ96CN4 794 aa22.68■■□□□ 1.22
SSU72-203ENST00000378725 NOL10Q9BSC4 688 aaKnown RBP22.68■■□□□ 1.22
SSU72-203ENST00000378725 AATFQ9NY61 560 aaKnown RBP eCLIP22.68■■□□□ 1.22
SSU72-203ENST00000378725 MYO5AQ9Y4I1 1855 aaKnown RBP22.68■■□□□ 1.22
SSU72-203ENST00000378725 ECM29Q5VYK3 1845 aa22.68■■□□□ 1.22
SSU72-203ENST00000378725 NPM3O75607 178 aaKnown RBP22.67■■□□□ 1.22
SSU72-203ENST00000378725 WDHD1O75717 1129 aaPredicted RBP22.67■■□□□ 1.22
SSU72-203ENST00000378725 PLCG2P16885 1265 aa22.67■■□□□ 1.22
SSU72-203ENST00000378725 NFIAQ12857 509 aa22.67■■□□□ 1.22
SSU72-203ENST00000378725 PRAMEF18Q5VWM3 479 aa22.67■■□□□ 1.22
SSU72-203ENST00000378725 CERS3Q8IU89 383 aa22.67■■□□□ 1.22
SSU72-203ENST00000378725 FAM198AQ9UFP1 575 aa22.67■■□□□ 1.22
SSU72-203ENST00000378725 RFX7Q2KHR2 1363 aa22.66■■□□□ 1.22
SSU72-203ENST00000378725 CHGBP05060 677 aa22.66■■□□□ 1.22
SSU72-203ENST00000378725 ZFYP08048 801 aaPredicted RBP22.66■■□□□ 1.22
SSU72-203ENST00000378725 DYNLL1P63167 89 aaKnown RBP22.66■■□□□ 1.22
SSU72-203ENST00000378725 SLFNL1Q499Z3 407 aa22.66■■□□□ 1.22
SSU72-203ENST00000378725 TICAM2Q86XR7 235 aa22.66■■□□□ 1.22
SSU72-203ENST00000378725 SH3RF3Q8TEJ3 882 aaPredicted RBP22.66■■□□□ 1.22
SSU72-203ENST00000378725 FAM151AQ8WW52 585 aa22.66■■□□□ 1.22
SSU72-203ENST00000378725 TEPSINQ96N21 525 aa22.66■■□□□ 1.22
SSU72-203ENST00000378725 RIOK1Q9BRS2 568 aaKnown RBP22.66■■□□□ 1.22
SSU72-203ENST00000378725 POLR2AP24928 1970 aaKnown RBP22.66■■□□□ 1.22
SSU72-203ENST00000378725 RNF113AO15541 343 aaKnown RBP22.65■■□□□ 1.22
SSU72-203ENST00000378725 ENTPD3O75355 529 aa22.65■■□□□ 1.22
SSU72-203ENST00000378725 CELF2O95319 508 aaKnown RBP22.65■■□□□ 1.22
SSU72-203ENST00000378725 HSPA6P17066 643 aa22.65■■□□□ 1.22
SSU72-203ENST00000378725 LRRFIP1Q32MZ4 808 aaKnown RBP22.65■■□□□ 1.22
SSU72-203ENST00000378725 MIGA1Q8NAN2 632 aa22.65■■□□□ 1.22
SSU72-203ENST00000378725 MAGEB6P1A0A0J9YX57 407 aa22.64■■□□□ 1.21
SSU72-203ENST00000378725 TMEM88BA6NKF7 163 aa22.64■■□□□ 1.21
SSU72-203ENST00000378725 FSD1Q9BTV5 496 aa22.64■■□□□ 1.21
SSU72-203ENST00000378725 TMEM39BQ9GZU3 492 aa22.64■■□□□ 1.21
SSU72-203ENST00000378725 DDX4Q9NQI0 724 aaKnown RBP22.64■■□□□ 1.21
SSU72-203ENST00000378725 RGS3P49796 1198 aa22.63■■□□□ 1.21
SSU72-203ENST00000378725 SUPT20HL1Q3ZLR7 823 aa22.63■■□□□ 1.21
SSU72-203ENST00000378725 NBPF12Q5TAG4 269 aaPredicted RBP22.63■■□□□ 1.21
SSU72-203ENST00000378725 ZFPM1Q8IX07 1006 aa22.63■■□□□ 1.21
SSU72-203ENST00000378725 TEX11Q8IYF3 940 aa22.63■■□□□ 1.21
SSU72-203ENST00000378725 CREBZFQ9NS37 354 aa22.63■■□□□ 1.21
SSU72-203ENST00000378725 TRIM6-TRIM34B2RNG4 842 aa22.62■■□□□ 1.21
SSU72-203ENST00000378725 TCP10Q12799 353 aa22.62■■□□□ 1.21
SSU72-203ENST00000378725 TTC22Q5TAA0 569 aa22.62■■□□□ 1.21
SSU72-203ENST00000378725 APPBP2Q92624 585 aa22.62■■□□□ 1.21
SSU72-203ENST00000378725 ZNF408Q9H9D4 720 aa22.62■■□□□ 1.21
SSU72-203ENST00000378725 RPAP1Q9BWH6 1393 aaPredicted RBP22.62■■□□□ 1.21
SSU72-203ENST00000378725 NF2P35240 595 aa22.61■■□□□ 1.21
SSU72-203ENST00000378725 CDAN1Q8IWY9 1227 aa22.61■■□□□ 1.21
SSU72-203ENST00000378725 PUS7LQ9H0K6 701 aaKnown RBP22.61■■□□□ 1.21
SSU72-203ENST00000378725 GSPT1P15170 499 aaKnown RBP22.6■■□□□ 1.21
SSU72-203ENST00000378725 FKBP1BP68106 108 aa22.6■■□□□ 1.21
SSU72-203ENST00000378725 PICALMQ13492 652 aa22.6■■□□□ 1.21
SSU72-203ENST00000378725 TGFBRAP1Q8WUH2 860 aa22.6■■□□□ 1.21
SSU72-203ENST00000378725 OSBP2Q969R2 916 aa22.6■■□□□ 1.21
SSU72-203ENST00000378725 RILPL2Q969X0 211 aa22.6■■□□□ 1.21
SSU72-203ENST00000378725 GBA2Q9HCG7 927 aaPredicted RBP22.6■■□□□ 1.21
SSU72-203ENST00000378725 ZMYM1Q5SVZ6 1142 aa22.59■■□□□ 1.21
SSU72-203ENST00000378725 SH3BP5LQ7L8J4 393 aa22.59■■□□□ 1.21
SSU72-203ENST00000378725 LCORLQ8N3X6 602 aa22.59■■□□□ 1.21
SSU72-203ENST00000378725 C2orf69Q8N8R5 385 aa22.59■■□□□ 1.21
SSU72-203ENST00000378725 OSBPL5Q9H0X9 879 aaPredicted RBP22.59■■□□□ 1.21
SSU72-203ENST00000378725 MBD4O95243 580 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms