RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 TRIM37O94972 964 aa14.81□□□□□ -0.04
PRPF4-202ENST00000374199 ATL3Q6DD88 541 aa14.81□□□□□ -0.04
PRPF4-202ENST00000374199 LRRC2Q9BYS8 371 aa14.81□□□□□ -0.04
PRPF4-202ENST00000374199 PTPDC1A2A3K4 754 aa14.81□□□□□ -0.04
PRPF4-202ENST00000374199 GADD45BO75293 160 aaPredicted RBP14.81□□□□□ -0.04
PRPF4-202ENST00000374199 SERPINB2P05120 415 aa14.81□□□□□ -0.04
PRPF4-202ENST00000374199 HIBADHP31937 336 aaKnown RBP14.81□□□□□ -0.04
PRPF4-202ENST00000374199 AKNAD1Q5T1N1 836 aa14.81□□□□□ -0.04
PRPF4-202ENST00000374199 TXNRD3Q86VQ6 643 aa14.81□□□□□ -0.04
PRPF4-202ENST00000374199 FAM217BQ9NTX9 383 aaPredicted RBP14.81□□□□□ -0.04
PRPF4-202ENST00000374199 NTRK3Q16288 839 aa14.8□□□□□ -0.04
PRPF4-202ENST00000374199 ILDR1Q86SU0 546 aaPredicted RBP14.8□□□□□ -0.04
PRPF4-202ENST00000374199 GREB1LQ9C091 1923 aaPredicted RBP14.8□□□□□ -0.04
PRPF4-202ENST00000374199 STK36Q9NRP7 1315 aa14.8□□□□□ -0.04
PRPF4-202ENST00000374199 HAND2P61296 217 aa14.8□□□□□ -0.04
PRPF4-202ENST00000374199 GRPEL1Q9HAV7 217 aa14.8□□□□□ -0.04
PRPF4-202ENST00000374199 GPHNQ9NQX3 736 aaPredicted RBP14.8□□□□□ -0.04
PRPF4-202ENST00000374199 SBK1Q52WX2 424 aa14.79□□□□□ -0.04
PRPF4-202ENST00000374199 AEBP2Q6ZN18 517 aaPredicted RBP14.79□□□□□ -0.04
PRPF4-202ENST00000374199 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.79□□□□□ -0.04
PRPF4-202ENST00000374199 PRKAB2O43741 272 aa14.79□□□□□ -0.04
PRPF4-202ENST00000374199 BBOX1O75936 387 aa14.79□□□□□ -0.04
PRPF4-202ENST00000374199 PHF14O94880 888 aa14.79□□□□□ -0.04
PRPF4-202ENST00000374199 KRT23Q9C075 422 aa14.79□□□□□ -0.04
PRPF4-202ENST00000374199 MECOMQ03112 1051 aa14.79□□□□□ -0.04
PRPF4-202ENST00000374199 DNM1Q05193 864 aaKnown RBP14.79□□□□□ -0.04
PRPF4-202ENST00000374199 C10orf71Q711Q0 1435 aa14.78□□□□□ -0.04
PRPF4-202ENST00000374199 MAGEB6P1A0A0J9YX57 407 aa14.78□□□□□ -0.04
PRPF4-202ENST00000374199 ST5P78524 1137 aa14.78□□□□□ -0.04
PRPF4-202ENST00000374199 SEC23AQ15436 765 aa14.78□□□□□ -0.04
PRPF4-202ENST00000374199 CSPP1Q1MSJ5 1256 aa14.78□□□□□ -0.04
PRPF4-202ENST00000374199 LRSAM1Q6UWE0 723 aa14.78□□□□□ -0.04
PRPF4-202ENST00000374199 GTF2E1P29083 439 aaPredicted RBP14.78□□□□□ -0.04
PRPF4-202ENST00000374199 PPP4CP60510 307 aa14.78□□□□□ -0.04
PRPF4-202ENST00000374199 APOA5Q6Q788 366 aa14.78□□□□□ -0.04
PRPF4-202ENST00000374199 RBM43Q6ZSC3 357 aaKnown RBP14.78□□□□□ -0.04
PRPF4-202ENST00000374199 FUCA2Q9BTY2 467 aa14.78□□□□□ -0.04
PRPF4-202ENST00000374199 CYP7A1P22680 504 aa14.77□□□□□ -0.04
PRPF4-202ENST00000374199 STK3Q13188 491 aa14.77□□□□□ -0.04
PRPF4-202ENST00000374199 RBM17Q96I25 401 aaKnown RBP14.77□□□□□ -0.04
PRPF4-202ENST00000374199 ZSWIM5Q9P217 1185 aa14.77□□□□□ -0.04
PRPF4-202ENST00000374199 LRP2BPQ9P2M1 347 aa14.77□□□□□ -0.04
PRPF4-202ENST00000374199 SLC4A4Q9Y6R1 1079 aa14.77□□□□□ -0.04
PRPF4-202ENST00000374199 GPSM2P81274 684 aa14.77□□□□□ -0.04
PRPF4-202ENST00000374199 PPARAQ07869 468 aa14.77□□□□□ -0.04
PRPF4-202ENST00000374199 CAVIN1Q6NZI2 390 aaKnown RBP14.77□□□□□ -0.04
PRPF4-202ENST00000374199 TTC6Q86TZ1 520 aa14.77□□□□□ -0.04
PRPF4-202ENST00000374199 SLC51AQ86UW1 340 aa14.77□□□□□ -0.04
PRPF4-202ENST00000374199 FLAD1Q8NFF5 587 aa14.77□□□□□ -0.04
PRPF4-202ENST00000374199 NACAP1Q9BZK3 213 aa14.77□□□□□ -0.04
PRPF4-202ENST00000374199 NAPBQ9H115 298 aa14.77□□□□□ -0.04
PRPF4-202ENST00000374199 RGS17Q9UGC6 210 aaPredicted RBP14.77□□□□□ -0.04
PRPF4-202ENST00000374199 MYH6P13533 1939 aa14.77□□□□□ -0.05
PRPF4-202ENST00000374199 ORC4O43929 436 aa14.77□□□□□ -0.05
PRPF4-202ENST00000374199 ATP2B4P23634 1241 aa14.77□□□□□ -0.05
PRPF4-202ENST00000374199 CHST3Q7LGC8 479 aa14.77□□□□□ -0.05
PRPF4-202ENST00000374199 FAM163AQ96GL9 167 aaPredicted RBP14.77□□□□□ -0.05
PRPF4-202ENST00000374199 GZF1Q9H116 711 aaPredicted RBP14.77□□□□□ -0.05
PRPF4-202ENST00000374199 FAM205AQ6ZU69 1335 aa14.76□□□□□ -0.05
PRPF4-202ENST00000374199 DHX16O60231 1041 aaKnown RBP14.76□□□□□ -0.05
PRPF4-202ENST00000374199 RALYLQ86SE5 291 aaKnown RBP14.76□□□□□ -0.05
PRPF4-202ENST00000374199 KLF18A0A0U1RQI7 1052 aa14.76□□□□□ -0.05
PRPF4-202ENST00000374199 COL23A1Q86Y22 540 aaPredicted RBP14.76□□□□□ -0.05
PRPF4-202ENST00000374199 SCAND2PQ9GZW5 306 aaPredicted RBP14.76□□□□□ -0.05
PRPF4-202ENST00000374199 NCOA5Q9HCD5 579 aaKnown RBP14.76□□□□□ -0.05
PRPF4-202ENST00000374199 SP8Q8IXZ3 490 aa14.75□□□□□ -0.05
PRPF4-202ENST00000374199 WDR66Q8TBY9 1149 aa14.75□□□□□ -0.05
PRPF4-202ENST00000374199 RNF41Q9H4P4 317 aaPredicted RBP14.75□□□□□ -0.05
PRPF4-202ENST00000374199 SENP2Q9HC62 589 aa14.75□□□□□ -0.05
PRPF4-202ENST00000374199 ATP8A2Q9NTI2 1148 aa14.75□□□□□ -0.05
PRPF4-202ENST00000374199 KRT85P78386 507 aa14.75□□□□□ -0.05
PRPF4-202ENST00000374199 FOXD4L5Q5VV16 416 aaPredicted RBP14.75□□□□□ -0.05
PRPF4-202ENST00000374199 CTR9Q6PD62 1173 aa14.75□□□□□ -0.05
PRPF4-202ENST00000374199 FOXD4L4Q8WXT5 416 aaPredicted RBP14.75□□□□□ -0.05
PRPF4-202ENST00000374199 RCOR1Q9UKL0 485 aa14.75□□□□□ -0.05
PRPF4-202ENST00000374199 KIF3AQ9Y496 699 aa14.75□□□□□ -0.05
PRPF4-202ENST00000374199 B4E1Z4 1266 aa14.75□□□□□ -0.05
PRPF4-202ENST00000374199 SPTY2D1Q68D10 685 aaPredicted RBP14.75□□□□□ -0.05
PRPF4-202ENST00000374199 NBPF11Q86T75 865 aa14.75□□□□□ -0.05
PRPF4-202ENST00000374199 NLGN1Q8N2Q7 840 aa14.75□□□□□ -0.05
PRPF4-202ENST00000374199 RBM27Q9P2N5 1060 aaKnown RBP14.75□□□□□ -0.05
PRPF4-202ENST00000374199 SIPA1L1O43166 1804 aa14.74□□□□□ -0.05
PRPF4-202ENST00000374199 CTDSPL2Q05D32 466 aa14.74□□□□□ -0.05
PRPF4-202ENST00000374199 TRDNQ13061 729 aa14.74□□□□□ -0.05
PRPF4-202ENST00000374199 CERS3Q8IU89 383 aa14.74□□□□□ -0.05
PRPF4-202ENST00000374199 LEO1Q8WVC0 666 aaPredicted RBP14.74□□□□□ -0.05
PRPF4-202ENST00000374199 MORC2Q9Y6X9 1032 aaPredicted RBP14.74□□□□□ -0.05
PRPF4-202ENST00000374199 MYH1P12882 1939 aa14.74□□□□□ -0.05
PRPF4-202ENST00000374199 GAKO14976 1311 aa14.74□□□□□ -0.05
PRPF4-202ENST00000374199 SRGNP10124 158 aa14.74□□□□□ -0.05
PRPF4-202ENST00000374199 CCDC24Q8N4L8 307 aa14.74□□□□□ -0.05
PRPF4-202ENST00000374199 FBXO18Q8NFZ0 1043 aa14.74□□□□□ -0.05
PRPF4-202ENST00000374199 PPP1R9BQ96SB3 815 aa14.74□□□□□ -0.05
PRPF4-202ENST00000374199 GDPD2Q9HCC8 539 aa14.74□□□□□ -0.05
PRPF4-202ENST00000374199 ADAMTSL1Q8N6G6 1762 aa14.74□□□□□ -0.05
PRPF4-202ENST00000374199 GOLGA8BA8MQT2 603 aa14.73□□□□□ -0.05
PRPF4-202ENST00000374199 CDC27P30260 824 aa14.73□□□□□ -0.05
PRPF4-202ENST00000374199 CCDC183Q5T5S1 534 aa14.73□□□□□ -0.05
PRPF4-202ENST00000374199 MFSD6Q6ZSS7 791 aa14.73□□□□□ -0.05
PRPF4-202ENST00000374199 DCP1AQ9NPI6 582 aaPredicted RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms