RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 MECOMQ03112 1051 aa24.62■■□□□ 1.53
SYNC-201ENST00000373484 CHD1LQ86WJ1 897 aa24.62■■□□□ 1.53
SYNC-201ENST00000373484 ZNF384Q8TF68 577 aa24.62■■□□□ 1.53
SYNC-201ENST00000373484 AOX1Q06278 1338 aa24.62■■□□□ 1.53
SYNC-201ENST00000373484 IGSF3O75054 1194 aa24.61■■□□□ 1.53
SYNC-201ENST00000373484 MFAP1P55081 439 aaKnown RBP24.61■■□□□ 1.53
SYNC-201ENST00000373484 NSUN4Q96CB9 384 aaKnown RBP24.61■■□□□ 1.53
SYNC-201ENST00000373484 DNAJC2Q99543 621 aaKnown RBP24.61■■□□□ 1.53
SYNC-201ENST00000373484 HAUS7Q99871 368 aa24.61■■□□□ 1.53
SYNC-201ENST00000373484 RAI14Q9P0K7 980 aa24.61■■□□□ 1.53
SYNC-201ENST00000373484 DAGLAQ9Y4D2 1042 aa24.61■■□□□ 1.53
SYNC-201ENST00000373484 MYO1BO43795 1136 aa24.61■■□□□ 1.53
SYNC-201ENST00000373484 TRAK2O60296 914 aa24.61■■□□□ 1.53
SYNC-201ENST00000373484 MX1P20591 662 aa24.61■■□□□ 1.53
SYNC-201ENST00000373484 BMP2KLQ5H9B9 411 aa24.61■■□□□ 1.53
SYNC-201ENST00000373484 CDC37L1Q7L3B6 337 aa24.61■■□□□ 1.53
SYNC-201ENST00000373484 XRCC6P12956 609 aaKnown RBP eCLIP24.6■■□□□ 1.53
SYNC-201ENST00000373484 TTF1Q15361 905 aaPredicted RBP24.6■■□□□ 1.53
SYNC-201ENST00000373484 TSHZ3Q63HK5 1081 aa24.6■■□□□ 1.53
SYNC-201ENST00000373484 APOBEC3HQ6NTF7 200 aaKnown RBP24.6■■□□□ 1.53
SYNC-201ENST00000373484 SLF2Q8IX21 1173 aa24.6■■□□□ 1.53
SYNC-201ENST00000373484 GLIS2Q9BZE0 524 aaPredicted RBP24.6■■□□□ 1.53
SYNC-201ENST00000373484 GAKO14976 1311 aa24.6■■□□□ 1.53
SYNC-201ENST00000373484 PASKQ96RG2 1323 aa24.6■■□□□ 1.53
SYNC-201ENST00000373484 KRT26Q7Z3Y9 468 aa24.59■■□□□ 1.53
SYNC-201ENST00000373484 FAM163AQ96GL9 167 aaPredicted RBP24.59■■□□□ 1.53
SYNC-201ENST00000373484 GOLIM4O00461 696 aa24.58■■□□□ 1.53
SYNC-201ENST00000373484 SPDYE2Q495Y8 402 aa24.58■■□□□ 1.53
SYNC-201ENST00000373484 PI4K2BQ8TCG2 481 aa24.58■■□□□ 1.53
SYNC-201ENST00000373484 TDRD3Q9H7E2 651 aaKnown RBP24.58■■□□□ 1.53
SYNC-201ENST00000373484 PAG1Q9NWQ8 432 aa24.58■■□□□ 1.53
SYNC-201ENST00000373484 MROH7-TTC4A0A0A0MT08 1334 aa24.58■■□□□ 1.53
SYNC-201ENST00000373484 CLRN2A0PK11 232 aa24.58■■□□□ 1.53
SYNC-201ENST00000373484 GSTO1P78417 241 aa24.58■■□□□ 1.53
SYNC-201ENST00000373484 APOBEC3FQ8IUX4 373 aaKnown RBP24.58■■□□□ 1.53
SYNC-201ENST00000373484 SULF1Q8IWU6 871 aa24.58■■□□□ 1.53
SYNC-201ENST00000373484 STAP2Q9UGK3 403 aa24.58■■□□□ 1.53
SYNC-201ENST00000373484 ERC2O15083 957 aa24.57■■□□□ 1.52
SYNC-201ENST00000373484 IDH1O75874 414 aaKnown RBP24.57■■□□□ 1.52
SYNC-201ENST00000373484 SKOR2Q2VWA4 1001 aaPredicted RBP24.57■■□□□ 1.52
SYNC-201ENST00000373484 USP48Q86UV5 1035 aa24.57■■□□□ 1.52
SYNC-201ENST00000373484 EDC3Q96F86 508 aaKnown RBP24.57■■□□□ 1.52
SYNC-201ENST00000373484 ZNF70Q9UC06 446 aaPredicted RBP24.57■■□□□ 1.52
SYNC-201ENST00000373484 ADM5C9JUS6 153 aa24.56■■□□□ 1.52
SYNC-201ENST00000373484 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.56■■□□□ 1.52
SYNC-201ENST00000373484 TRAF5O00463 557 aa24.56■■□□□ 1.52
SYNC-201ENST00000373484 GLRX3O76003 335 aaKnown RBP24.56■■□□□ 1.52
SYNC-201ENST00000373484 LDHCP07864 332 aa24.56■■□□□ 1.52
SYNC-201ENST00000373484 PDE1AP54750 535 aa24.56■■□□□ 1.52
SYNC-201ENST00000373484 NAA16Q6N069 864 aaPredicted RBP24.56■■□□□ 1.52
SYNC-201ENST00000373484 SCAF8Q9UPN6 1271 aaKnown RBP24.56■■□□□ 1.52
SYNC-201ENST00000373484 CDK5RAP2Q96SN8 1893 aa24.56■■□□□ 1.52
SYNC-201ENST00000373484 MAP3K12Q12852 859 aa24.55■■□□□ 1.52
SYNC-201ENST00000373484 FMR1Q06787 632 aaKnown RBP eCLIP24.54■■□□□ 1.52
SYNC-201ENST00000373484 VEZTQ9HBM0 779 aa24.54■■□□□ 1.52
SYNC-201ENST00000373484 GPR75-ASB3A0A0A6YYF3 556 aa24.54■■□□□ 1.52
SYNC-201ENST00000373484 CLCN1P35523 988 aa24.54■■□□□ 1.52
SYNC-201ENST00000373484 TMED8Q6PL24 325 aaPredicted RBP24.54■■□□□ 1.52
SYNC-201ENST00000373484 FOCADQ5VW36 1801 aa24.53■■□□□ 1.52
SYNC-201ENST00000373484 BTDP43251 543 aa24.53■■□□□ 1.52
SYNC-201ENST00000373484 CDC42EP5Q6NZY7 148 aa24.53■■□□□ 1.52
SYNC-201ENST00000373484 DLK2Q6UY11 383 aa24.53■■□□□ 1.52
SYNC-201ENST00000373484 GBP4Q96PP9 640 aa24.53■■□□□ 1.52
SYNC-201ENST00000373484 RRAGDQ9NQL2 400 aaPredicted RBP24.53■■□□□ 1.52
SYNC-201ENST00000373484 PLEKHM2Q8IWE5 1019 aa24.52■■□□□ 1.52
SYNC-201ENST00000373484 MAGEB6Q8N7X4 407 aa24.52■■□□□ 1.52
SYNC-201ENST00000373484 AK9Q5TCS8 1911 aa24.52■■□□□ 1.52
SYNC-201ENST00000373484 TNFAIP1Q13829 316 aa24.51■■□□□ 1.51
SYNC-201ENST00000373484 ADGRA1Q86SQ6 560 aa24.51■■□□□ 1.51
SYNC-201ENST00000373484 TMOD2Q9NZR1 351 aa24.51■■□□□ 1.51
SYNC-201ENST00000373484 APLP1P51693 650 aa24.51■■□□□ 1.51
SYNC-201ENST00000373484 FKBP1CQ5VVH2 108 aa24.51■■□□□ 1.51
SYNC-201ENST00000373484 DEFB129Q9H1M3 183 aa24.51■■□□□ 1.51
SYNC-201ENST00000373484 OSBPL3Q9H4L5 887 aa24.51■■□□□ 1.51
SYNC-201ENST00000373484 USP40Q9NVE5 1235 aa24.51■■□□□ 1.51
SYNC-201ENST00000373484 HSPA6P17066 643 aa24.5■■□□□ 1.51
SYNC-201ENST00000373484 CYP7A1P22680 504 aa24.5■■□□□ 1.51
SYNC-201ENST00000373484 CACNB3P54284 484 aa24.5■■□□□ 1.51
SYNC-201ENST00000373484 SLC9C2Q5TAH2 1124 aa24.5■■□□□ 1.51
SYNC-201ENST00000373484 CDCA5Q96FF9 252 aa24.5■■□□□ 1.51
SYNC-201ENST00000373484 PPP2R3BQ9Y5P8 575 aa24.5■■□□□ 1.51
SYNC-201ENST00000373484 TCP10L2B9ZVM9 353 aa24.49■■□□□ 1.51
SYNC-201ENST00000373484 PDE6AP16499 860 aa24.49■■□□□ 1.51
SYNC-201ENST00000373484 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.49■■□□□ 1.51
SYNC-201ENST00000373484 RFX7Q2KHR2 1363 aa24.49■■□□□ 1.51
SYNC-201ENST00000373484 RHBDL3P58872 404 aa24.49■■□□□ 1.51
SYNC-201ENST00000373484 RAB3GAP1Q15042 981 aa24.49■■□□□ 1.51
SYNC-201ENST00000373484 CLEC17AQ6ZS10 378 aa24.49■■□□□ 1.51
SYNC-201ENST00000373484 KBTBD3Q8NAB2 608 aa24.49■■□□□ 1.51
SYNC-201ENST00000373484 CNTNAP1P78357 1384 aa24.48■■□□□ 1.51
SYNC-201ENST00000373484 MAP4K4O95819 1239 aaPredicted RBP24.48■■□□□ 1.51
SYNC-201ENST00000373484 TNNI2P48788 182 aa24.48■■□□□ 1.51
SYNC-201ENST00000373484 PPP4CP60510 307 aa24.48■■□□□ 1.51
SYNC-201ENST00000373484 RASA3Q14644 834 aa24.48■■□□□ 1.51
SYNC-201ENST00000373484 CST9Q5W186 159 aa24.48■■□□□ 1.51
SYNC-201ENST00000373484 NOL10Q9BSC4 688 aaKnown RBP24.48■■□□□ 1.51
SYNC-201ENST00000373484 AATFQ9NY61 560 aaKnown RBP eCLIP24.48■■□□□ 1.51
SYNC-201ENST00000373484 TCRBV5S4A2TA0A5A2 114 aa24.47■■□□□ 1.51
SYNC-201ENST00000373484 BAG3O95817 575 aa24.47■■□□□ 1.51
SYNC-201ENST00000373484 PRAMEF18Q5VWM3 479 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms