RNA–Protein interactions for RNA: ENST00000372285.7

CD40-202, Transcript of CD40 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD40, Length 1,729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-202ENST00000372285 CLEC17AQ6ZS10 378 aa21.32■■□□□ 1
CD40-202ENST00000372285 NECAB1Q8N987 351 aa21.32■■□□□ 1
CD40-202ENST00000372285 SDR42E1Q8WUS8 393 aa21.32■■□□□ 1
CD40-202ENST00000372285 LAMB1P07942 1786 aa21.32■■□□□ 1
CD40-202ENST00000372285 SNED1Q8TER0 1413 aa21.32■■□□□ 1
CD40-202ENST00000372285 PRC1O43663 620 aa21.32■■□□□ 1
CD40-202ENST00000372285 ANTXR2P58335 489 aa21.32■■□□□ 1
CD40-202ENST00000372285 CC2D2BQ6DHV5 1058 aa21.32■■□□□ 1
CD40-202ENST00000372285 RTFDC1Q9BY42 306 aaPredicted RBP21.32■■□□□ 1
CD40-202ENST00000372285 CRNKL1Q9BZJ0 848 aaKnown RBP21.32■■□□□ 1
CD40-202ENST00000372285 ANAPC4Q9UJX5 808 aa21.32■■□□□ 1
CD40-202ENST00000372285 SMC3Q9UQE7 1217 aa21.32■■□□□ 1
CD40-202ENST00000372285 EVCP57679 992 aa21.31■■□□□ 1
CD40-202ENST00000372285 PKP1Q13835 747 aa21.31■■□□□ 1
CD40-202ENST00000372285 AKNAD1Q5T1N1 836 aa21.31■■□□□ 1
CD40-202ENST00000372285 AATFQ9NY61 560 aaKnown RBP eCLIP21.31■■□□□ 1
CD40-202ENST00000372285 ZDHHC9Q9Y397 364 aa21.31■■□□□ 1
CD40-202ENST00000372285 CDK5RAP2Q96SN8 1893 aa21.31■■□□□ 1
CD40-202ENST00000372285 MCM4P33991 863 aa21.3■■□□□ 1
CD40-202ENST00000372285 PPP4CP60510 307 aa21.3■■□□□ 1
CD40-202ENST00000372285 CTDSPL2Q05D32 466 aa21.3■■□□□ 1
CD40-202ENST00000372285 MFSD14BQ5SR56 506 aa21.3■■□□□ 1
CD40-202ENST00000372285 CHST3Q7LGC8 479 aa21.3■■□□□ 1
CD40-202ENST00000372285 STAG1Q8WVM7 1258 aa21.3■■□□□ 1
CD40-202ENST00000372285 GTF3C6Q969F1 213 aa21.3■■□□□ 1
CD40-202ENST00000372285 CNNM2Q9H8M5 875 aa21.3■■□□□ 1
CD40-202ENST00000372285 ATP8A2Q9NTI2 1148 aa21.3■■□□□ 1
CD40-202ENST00000372285 MROH7-TTC4A0A0A0MT08 1334 aa21.29■■□□□ 1
CD40-202ENST00000372285 NEDD4P46934 1319 aa21.29■■□□□ 1
CD40-202ENST00000372285 PFKFB2O60825 505 aa21.29■■□□□ 1
CD40-202ENST00000372285 PPARAQ07869 468 aa21.29■■□□□ 1
CD40-202ENST00000372285 ZNF274Q96GC6 653 aaPredicted RBP21.29■■□□□ 1
CD40-202ENST00000372285 SUGT1Q9Y2Z0 365 aa21.29■■□□□ 1
CD40-202ENST00000372285 BRD1O95696 1058 aa21.29■■□□□ 1
CD40-202ENST00000372285 GTF2IP78347 998 aa21.29■■□□□ 1
CD40-202ENST00000372285 APOBRQ0VD83 1088 aa21.29■■□□□ 1
CD40-202ENST00000372285 FAM163AQ96GL9 167 aaPredicted RBP21.29■■□□□ 1
CD40-202ENST00000372285 GBP4Q96PP9 640 aa21.29■■□□□ 1
CD40-202ENST00000372285 KRT23Q9C075 422 aa21.29■■□□□ 1
CD40-202ENST00000372285 TACC3Q9Y6A5 838 aa21.29■■□□□ 1
CD40-202ENST00000372285 DIXDC1Q155Q3 683 aa21.28■■□□□ 1
CD40-202ENST00000372285 MFSD6Q6ZSS7 791 aa21.28■■□□□ 1
CD40-202ENST00000372285 CYB5R4Q7L1T6 521 aa21.28■■□□□ 1
CD40-202ENST00000372285 CERS3Q8IU89 383 aa21.28■■□□□ 1
CD40-202ENST00000372285 RNF41Q9H4P4 317 aaPredicted RBP21.28■■□□□ 1
CD40-202ENST00000372285 ZNF646O15015 1829 aaPredicted RBP21.27■■□□□ 1
CD40-202ENST00000372285 B4E1Z4 1266 aa21.27■■□□□ 1
CD40-202ENST00000372285 BAG3O95817 575 aa21.27■■□□□ 1
CD40-202ENST00000372285 GJB2P29033 226 aa21.27■■□□□ 1
CD40-202ENST00000372285 STK3Q13188 491 aa21.27■■□□□ 1
CD40-202ENST00000372285 GRIPAP1Q4V328 841 aa21.27■■□□□ 1
CD40-202ENST00000372285 SLF2Q8IX21 1173 aa21.27■■□□□ 1
CD40-202ENST00000372285 DOK7Q18PE1 504 aa21.26■□□□□ 0.99
CD40-202ENST00000372285 PODNQ7Z5L7 613 aa21.26■□□□□ 0.99
CD40-202ENST00000372285 TTLL6Q8N841 843 aa21.26■□□□□ 0.99
CD40-202ENST00000372285 NKX2-3Q8TAU0 364 aa21.26■□□□□ 0.99
CD40-202ENST00000372285 TMEM87BQ96K49 555 aa21.26■□□□□ 0.99
CD40-202ENST00000372285 NOL10Q9BSC4 688 aaKnown RBP21.26■□□□□ 0.99
CD40-202ENST00000372285 DCP1AQ9NPI6 582 aaPredicted RBP21.26■□□□□ 0.99
CD40-202ENST00000372285 NAV1Q8NEY1 1877 aa21.26■□□□□ 0.99
CD40-202ENST00000372285 G3V3G9 751 aa21.26■□□□□ 0.99
CD40-202ENST00000372285 KCNA3P22001 575 aa21.26■□□□□ 0.99
CD40-202ENST00000372285 PDIA3P30101 505 aaKnown RBP21.26■□□□□ 0.99
CD40-202ENST00000372285 SBK1Q52WX2 424 aa21.26■□□□□ 0.99
CD40-202ENST00000372285 DCAF8Q5TAQ9 597 aa21.26■□□□□ 0.99
CD40-202ENST00000372285 CTR9Q6PD62 1173 aa21.26■□□□□ 0.99
CD40-202ENST00000372285 INCENPQ9NQS7 918 aa21.26■□□□□ 0.99
CD40-202ENST00000372285 GPHNQ9NQX3 736 aaPredicted RBP21.26■□□□□ 0.99
CD40-202ENST00000372285 ZNF219Q9P2Y4 722 aaPredicted RBP21.26■□□□□ 0.99
CD40-202ENST00000372285 GAKO14976 1311 aa21.25■□□□□ 0.99
CD40-202ENST00000372285 WDR33Q9C0J8 1336 aaKnown RBP21.25■□□□□ 0.99
CD40-202ENST00000372285 GPR75-ASB3A0A0A6YYF3 556 aa21.25■□□□□ 0.99
CD40-202ENST00000372285 MINDY4BA8MYZ0 360 aa21.25■□□□□ 0.99
CD40-202ENST00000372285 SUPT20HQ8NEM7 779 aa21.25■□□□□ 0.99
CD40-202ENST00000372285 CHMP4CQ96CF2 233 aa21.25■□□□□ 0.99
CD40-202ENST00000372285 LLPHQ9BRT6 129 aaKnown RBP21.25■□□□□ 0.99
CD40-202ENST00000372285 MTFR1LQ9H019 292 aa21.25■□□□□ 0.99
CD40-202ENST00000372285 FOCADQ5VW36 1801 aa21.25■□□□□ 0.99
CD40-202ENST00000372285 SCN9AQ15858 1988 aa21.25■□□□□ 0.99
CD40-202ENST00000372285 ZBTB7AO95365 584 aa21.24■□□□□ 0.99
CD40-202ENST00000372285 PCP11498 1178 aaKnown RBP21.24■□□□□ 0.99
CD40-202ENST00000372285 DPEP1P16444 411 aa21.24■□□□□ 0.99
CD40-202ENST00000372285 SCRN1Q12765 414 aa21.24■□□□□ 0.99
CD40-202ENST00000372285 SH3RF3Q8TEJ3 882 aaPredicted RBP21.24■□□□□ 0.99
CD40-202ENST00000372285 MTA3Q9BTC8 594 aa21.24■□□□□ 0.99
CD40-202ENST00000372285 ZSWIM5Q9P217 1185 aa21.24■□□□□ 0.99
CD40-202ENST00000372285 MKRN1Q9UHC7 482 aaKnown RBP21.24■□□□□ 0.99
CD40-202ENST00000372285 ANGEL1Q9UNK9 670 aaKnown RBP21.24■□□□□ 0.99
CD40-202ENST00000372285 USP17L12C9JPN9 530 aa21.24■□□□□ 0.99
CD40-202ENST00000372285 USP17L21D6R901 530 aa21.24■□□□□ 0.99
CD40-202ENST00000372285 SH2B2O14492 632 aaPredicted RBP21.24■□□□□ 0.99
CD40-202ENST00000372285 BAG4O95429 457 aaKnown RBP21.24■□□□□ 0.99
CD40-202ENST00000372285 FGRP09769 529 aa21.24■□□□□ 0.99
CD40-202ENST00000372285 PDIA4P13667 645 aaKnown RBP21.24■□□□□ 0.99
CD40-202ENST00000372285 SYT1P21579 422 aa21.24■□□□□ 0.99
CD40-202ENST00000372285 ARPP21Q9UBL0 812 aaPredicted RBP21.24■□□□□ 0.99
CD40-202ENST00000372285 DDX11L8A8MPP1 907 aa21.23■□□□□ 0.99
CD40-202ENST00000372285 KDM4AO75164 1064 aa21.23■□□□□ 0.99
CD40-202ENST00000372285 PLCG2P16885 1265 aa21.23■□□□□ 0.99
CD40-202ENST00000372285 CERS5Q8N5B7 392 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms