RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 GSE1Q14687 1217 aa20.31■□□□□ 0.84
VPS13B-201ENST00000355155 SBK1Q52WX2 424 aa20.31■□□□□ 0.84
VPS13B-201ENST00000355155 AKNAD1Q5T1N1 836 aa20.31■□□□□ 0.84
VPS13B-201ENST00000355155 FAM163AQ96GL9 167 aaPredicted RBP20.31■□□□□ 0.84
VPS13B-201ENST00000355155 ANO8Q9HCE9 1232 aaPredicted RBP20.31■□□□□ 0.84
VPS13B-201ENST00000355155 NAV1Q8NEY1 1877 aa20.31■□□□□ 0.84
VPS13B-201ENST00000355155 SH2B2O14492 632 aaPredicted RBP20.31■□□□□ 0.84
VPS13B-201ENST00000355155 F13A1P00488 732 aa20.31■□□□□ 0.84
VPS13B-201ENST00000355155 LIFRP42702 1097 aa20.31■□□□□ 0.84
VPS13B-201ENST00000355155 HMGN5P82970 282 aaKnown RBP20.31■□□□□ 0.84
VPS13B-201ENST00000355155 RALYLQ86SE5 291 aaKnown RBP20.31■□□□□ 0.84
VPS13B-201ENST00000355155 SUGT1Q9Y2Z0 365 aa20.31■□□□□ 0.84
VPS13B-201ENST00000355155 KLHL40Q2TBA0 621 aa20.31■□□□□ 0.84
VPS13B-201ENST00000355155 STK32BQ9NY57 414 aa20.31■□□□□ 0.84
VPS13B-201ENST00000355155 POLLQ9UGP5 575 aa20.31■□□□□ 0.84
VPS13B-201ENST00000355155 IQSEC3Q9UPP2 1182 aaPredicted RBP20.31■□□□□ 0.84
VPS13B-201ENST00000355155 GSTO1P78417 241 aa20.3■□□□□ 0.84
VPS13B-201ENST00000355155 TRDNQ13061 729 aa20.3■□□□□ 0.84
VPS13B-201ENST00000355155 EZH2Q15910 746 aaKnown RBP20.3■□□□□ 0.84
VPS13B-201ENST00000355155 NSUN7Q8NE18 718 aaKnown RBP20.3■□□□□ 0.84
VPS13B-201ENST00000355155 RNF41Q9H4P4 317 aaPredicted RBP20.3■□□□□ 0.84
VPS13B-201ENST00000355155 ATP8A2Q9NTI2 1148 aa20.3■□□□□ 0.84
VPS13B-201ENST00000355155 ABCF2Q9UG63 623 aa20.3■□□□□ 0.84
VPS13B-201ENST00000355155 TACC3Q9Y6A5 838 aa20.3■□□□□ 0.84
VPS13B-201ENST00000355155 UFL1O94874 794 aa20.3■□□□□ 0.84
VPS13B-201ENST00000355155 HAND2P61296 217 aa20.3■□□□□ 0.84
VPS13B-201ENST00000355155 IGDCC4Q8TDY8 1250 aa20.3■□□□□ 0.84
VPS13B-201ENST00000355155 ATP6V1DQ9Y5K8 247 aa20.3■□□□□ 0.84
VPS13B-201ENST00000355155 C10orf71Q711Q0 1435 aa20.3■□□□□ 0.84
VPS13B-201ENST00000355155 PRKAB2O43741 272 aa20.29■□□□□ 0.84
VPS13B-201ENST00000355155 CTDNEP1O95476 244 aa20.29■□□□□ 0.84
VPS13B-201ENST00000355155 MYH2Q9UKX2 1941 aa20.29■□□□□ 0.84
VPS13B-201ENST00000355155 NEDD4P46934 1319 aa20.29■□□□□ 0.84
VPS13B-201ENST00000355155 APOBRQ0VD83 1088 aa20.29■□□□□ 0.84
VPS13B-201ENST00000355155 CYB5R4Q7L1T6 521 aa20.29■□□□□ 0.84
VPS13B-201ENST00000355155 TBC1D22AQ8WUA7 517 aa20.29■□□□□ 0.84
VPS13B-201ENST00000355155 MKRN1Q9UHC7 482 aaKnown RBP20.29■□□□□ 0.84
VPS13B-201ENST00000355155 HPS5Q9UPZ3 1129 aa20.29■□□□□ 0.84
VPS13B-201ENST00000355155 ROBO3Q96MS0 1386 aa20.28■□□□□ 0.84
VPS13B-201ENST00000355155 KLHL34Q8N239 644 aa20.28■□□□□ 0.84
VPS13B-201ENST00000355155 COA1Q9GZY4 146 aa20.28■□□□□ 0.84
VPS13B-201ENST00000355155 ANGEL1Q9UNK9 670 aaKnown RBP20.28■□□□□ 0.84
VPS13B-201ENST00000355155 ECM29Q5VYK3 1845 aa20.28■□□□□ 0.84
VPS13B-201ENST00000355155 BAZ2AQ9UIF9 1905 aaKnown RBP20.28■□□□□ 0.84
VPS13B-201ENST00000355155 PSME4Q14997 1843 aa20.27■□□□□ 0.84
VPS13B-201ENST00000355155 APPP05067 770 aa20.27■□□□□ 0.84
VPS13B-201ENST00000355155 PPARAQ07869 468 aa20.27■□□□□ 0.84
VPS13B-201ENST00000355155 RTFDC1Q9BY42 306 aaPredicted RBP20.27■□□□□ 0.84
VPS13B-201ENST00000355155 PRDX5P30044 214 aa20.27■□□□□ 0.84
VPS13B-201ENST00000355155 SLC51AQ86UW1 340 aa20.27■□□□□ 0.84
VPS13B-201ENST00000355155 BRPF3Q9ULD4 1205 aa20.27■□□□□ 0.84
VPS13B-201ENST00000355155 ISY1Q9ULR0 285 aaKnown RBP20.26■□□□□ 0.83
VPS13B-201ENST00000355155 NSFL1CQ9UNZ2 370 aaKnown RBP20.26■□□□□ 0.83
VPS13B-201ENST00000355155 MIGA1Q8NAN2 632 aa20.26■□□□□ 0.83
VPS13B-201ENST00000355155 LRRC2Q9BYS8 371 aa20.26■□□□□ 0.83
VPS13B-201ENST00000355155 CRNKL1Q9BZJ0 848 aaKnown RBP20.26■□□□□ 0.83
VPS13B-201ENST00000355155 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.26■□□□□ 0.83
VPS13B-201ENST00000355155 GAKO14976 1311 aa20.26■□□□□ 0.83
VPS13B-201ENST00000355155 LDHBP07195 334 aaKnown RBP20.26■□□□□ 0.83
VPS13B-201ENST00000355155 LDHCP07864 332 aa20.26■□□□□ 0.83
VPS13B-201ENST00000355155 TDO2P48775 406 aa20.26■□□□□ 0.83
VPS13B-201ENST00000355155 FKBP1AP62942 108 aaKnown RBP20.26■□□□□ 0.83
VPS13B-201ENST00000355155 MCTP1Q6DN14 999 aa20.26■□□□□ 0.83
VPS13B-201ENST00000355155 LY9Q9HBG7 655 aa20.26■□□□□ 0.83
VPS13B-201ENST00000355155 SLX4Q8IY92 1834 aa20.25■□□□□ 0.83
VPS13B-201ENST00000355155 ORC4O43929 436 aa20.25■□□□□ 0.83
VPS13B-201ENST00000355155 EN1Q05925 392 aaPredicted RBP20.25■□□□□ 0.83
VPS13B-201ENST00000355155 MFSD6Q6ZSS7 791 aa20.25■□□□□ 0.83
VPS13B-201ENST00000355155 NKX2-3Q8TAU0 364 aa20.25■□□□□ 0.83
VPS13B-201ENST00000355155 KIF3AQ9Y496 699 aa20.25■□□□□ 0.83
VPS13B-201ENST00000355155 MROH7-TTC4A0A0A0MT08 1334 aa20.25■□□□□ 0.83
VPS13B-201ENST00000355155 DHX16O60231 1041 aaKnown RBP20.25■□□□□ 0.83
VPS13B-201ENST00000355155 DYNLL1P63167 89 aaKnown RBP20.25■□□□□ 0.83
VPS13B-201ENST00000355155 LARP1BQ659C4 914 aaKnown RBP20.25■□□□□ 0.83
VPS13B-201ENST00000355155 SLC16A10Q8TF71 515 aa20.25■□□□□ 0.83
VPS13B-201ENST00000355155 ARPP21Q9UBL0 812 aaPredicted RBP20.25■□□□□ 0.83
VPS13B-201ENST00000355155 BAG6P46379 1132 aa20.24■□□□□ 0.83
VPS13B-201ENST00000355155 FGD1P98174 961 aa20.24■□□□□ 0.83
VPS13B-201ENST00000355155 CTR9Q6PD62 1173 aa20.24■□□□□ 0.83
VPS13B-201ENST00000355155 TMTC2Q8N394 836 aa20.24■□□□□ 0.83
VPS13B-201ENST00000355155 GRIPAP1Q4V328 841 aa20.23■□□□□ 0.83
VPS13B-201ENST00000355155 DCP1AQ9NPI6 582 aaPredicted RBP20.23■□□□□ 0.83
VPS13B-201ENST00000355155 ZSWIM5Q9P217 1185 aa20.23■□□□□ 0.83
VPS13B-201ENST00000355155 GPR75-ASB3A0A0A6YYF3 556 aa20.23■□□□□ 0.83
VPS13B-201ENST00000355155 CCDC125Q86Z20 511 aa20.23■□□□□ 0.83
VPS13B-201ENST00000355155 C7orf43Q8WVR3 580 aa20.23■□□□□ 0.83
VPS13B-201ENST00000355155 TCHHQ07283 1943 aa20.23■□□□□ 0.83
VPS13B-201ENST00000355155 B4E1Z4 1266 aa20.22■□□□□ 0.83
VPS13B-201ENST00000355155 CTDSPL2Q05D32 466 aa20.22■□□□□ 0.83
VPS13B-201ENST00000355155 CHAF1AQ13111 956 aaPredicted RBP20.22■□□□□ 0.83
VPS13B-201ENST00000355155 MPNDQ8N594 471 aa20.22■□□□□ 0.83
VPS13B-201ENST00000355155 JAK2O60674 1132 aa20.22■□□□□ 0.83
VPS13B-201ENST00000355155 MBD3O95983 291 aa20.22■□□□□ 0.83
VPS13B-201ENST00000355155 CC2D2BQ6DHV5 1058 aa20.22■□□□□ 0.83
VPS13B-201ENST00000355155 DZIP1Q86YF9 867 aaKnown RBP20.22■□□□□ 0.83
VPS13B-201ENST00000355155 ZSCAN16Q9H4T2 348 aaPredicted RBP20.22■□□□□ 0.83
VPS13B-201ENST00000355155 STK36Q9NRP7 1315 aa20.22■□□□□ 0.83
VPS13B-201ENST00000355155 KLF18A0A0U1RQI7 1052 aa20.22■□□□□ 0.83
VPS13B-201ENST00000355155 FSD2A1L4K1 749 aa20.22■□□□□ 0.83
VPS13B-201ENST00000355155 PTPDC1A2A3K4 754 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms