RNA–Protein interactions for RNA: ENST00000355119.8

LIMS2-202, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,045 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-202ENST00000355119 LIFRP42702 1097 aa25.34■■□□□ 1.65
LIMS2-202ENST00000355119 TMEM67Q5HYA8 995 aa25.34■■□□□ 1.65
LIMS2-202ENST00000355119 NFXL1Q6ZNB6 911 aa25.34■■□□□ 1.65
LIMS2-202ENST00000355119 CDC5LQ99459 802 aaKnown RBP25.34■■□□□ 1.65
LIMS2-202ENST00000355119 ALG1Q9BT22 464 aa25.34■■□□□ 1.65
LIMS2-202ENST00000355119 NACAP1Q9BZK3 213 aa25.34■■□□□ 1.65
LIMS2-202ENST00000355119 LY9Q9HBG7 655 aa25.34■■□□□ 1.65
LIMS2-202ENST00000355119 ANO10Q9NW15 660 aa25.34■■□□□ 1.65
LIMS2-202ENST00000355119 GOLGA6L19H0YKK7 550 aa25.34■■□□□ 1.65
LIMS2-202ENST00000355119 SNAP23O00161 211 aa25.34■■□□□ 1.65
LIMS2-202ENST00000355119 BCAMP50895 628 aa25.34■■□□□ 1.65
LIMS2-202ENST00000355119 NKX2-3Q8TAU0 364 aa25.34■■□□□ 1.65
LIMS2-202ENST00000355119 TRIM5Q9C035 493 aa25.34■■□□□ 1.65
LIMS2-202ENST00000355119 BCORQ6W2J9 1755 aa25.34■■□□□ 1.65
LIMS2-202ENST00000355119 MYH14Q7Z406 1995 aaKnown RBP25.33■■□□□ 1.65
LIMS2-202ENST00000355119 GSG1L2A8MUP6 293 aa25.33■■□□□ 1.65
LIMS2-202ENST00000355119 CHRNDQ07001 517 aa25.33■■□□□ 1.65
LIMS2-202ENST00000355119 IQCB1Q15051 598 aa25.33■■□□□ 1.65
LIMS2-202ENST00000355119 ANO1Q5XXA6 986 aa25.33■■□□□ 1.65
LIMS2-202ENST00000355119 AKNAD1Q5T1N1 836 aa25.32■■□□□ 1.64
LIMS2-202ENST00000355119 CLEC4GQ6UXB4 293 aa25.32■■□□□ 1.64
LIMS2-202ENST00000355119 KCNF1Q9H3M0 494 aa25.32■■□□□ 1.64
LIMS2-202ENST00000355119 GOLGA8AA7E2F4 631 aa25.32■■□□□ 1.64
LIMS2-202ENST00000355119 KIF28PB7ZC32 967 aa25.32■■□□□ 1.64
LIMS2-202ENST00000355119 COL5A3P25940 1745 aaPredicted RBP25.31■■□□□ 1.64
LIMS2-202ENST00000355119 CDC25BP30305 580 aa25.31■■□□□ 1.64
LIMS2-202ENST00000355119 CTDSPL2Q05D32 466 aa25.31■■□□□ 1.64
LIMS2-202ENST00000355119 SARM1Q6SZW1 724 aa25.31■■□□□ 1.64
LIMS2-202ENST00000355119 C11orf57Q6ZUT1 292 aaPredicted RBP25.31■■□□□ 1.64
LIMS2-202ENST00000355119 KIAA1524Q8TCG1 905 aa25.31■■□□□ 1.64
LIMS2-202ENST00000355119 ZNF831Q5JPB2 1677 aa25.31■■□□□ 1.64
LIMS2-202ENST00000355119 CHD4Q14839 1912 aa25.31■■□□□ 1.64
LIMS2-202ENST00000355119 STK36Q9NRP7 1315 aa25.31■■□□□ 1.64
LIMS2-202ENST00000355119 IFIT3O14879 490 aaKnown RBP25.3■■□□□ 1.64
LIMS2-202ENST00000355119 CDC27P30260 824 aa25.3■■□□□ 1.64
LIMS2-202ENST00000355119 DNTTIP2Q5QJE6 756 aaKnown RBP25.3■■□□□ 1.64
LIMS2-202ENST00000355119 MFSD6Q6ZSS7 791 aa25.3■■□□□ 1.64
LIMS2-202ENST00000355119 MICU3Q86XE3 530 aa25.3■■□□□ 1.64
LIMS2-202ENST00000355119 DRC7Q8IY82 874 aa25.3■■□□□ 1.64
LIMS2-202ENST00000355119 STAG1Q8WVM7 1258 aa25.3■■□□□ 1.64
LIMS2-202ENST00000355119 GJB4Q9NTQ9 266 aa25.3■■□□□ 1.64
LIMS2-202ENST00000355119 SLC4A4Q9Y6R1 1079 aa25.3■■□□□ 1.64
LIMS2-202ENST00000355119 BCL9LQ86UU0 1499 aa25.3■■□□□ 1.64
LIMS2-202ENST00000355119 IARSP41252 1262 aaKnown RBP25.3■■□□□ 1.64
LIMS2-202ENST00000355119 TDO2P48775 406 aa25.3■■□□□ 1.64
LIMS2-202ENST00000355119 SENP2Q9HC62 589 aa25.3■■□□□ 1.64
LIMS2-202ENST00000355119 ZSWIM5Q9P217 1185 aa25.3■■□□□ 1.64
LIMS2-202ENST00000355119 CCDC69A6NI79 296 aa25.29■■□□□ 1.64
LIMS2-202ENST00000355119 KRT40Q6A162 431 aa25.29■■□□□ 1.64
LIMS2-202ENST00000355119 LCORLQ8N3X6 602 aa25.29■■□□□ 1.64
LIMS2-202ENST00000355119 SDF4Q9BRK5 362 aa25.29■■□□□ 1.64
LIMS2-202ENST00000355119 MTA3Q9BTC8 594 aa25.29■■□□□ 1.64
LIMS2-202ENST00000355119 LRP2BPQ9P2M1 347 aa25.29■■□□□ 1.64
LIMS2-202ENST00000355119 SLC12A7Q9Y666 1083 aa25.29■■□□□ 1.64
LIMS2-202ENST00000355119 NID2Q14112 1375 aa25.29■■□□□ 1.64
LIMS2-202ENST00000355119 A0A1B0GVL5 298 aa25.29■■□□□ 1.64
LIMS2-202ENST00000355119 NDUFA8P51970 172 aa25.29■■□□□ 1.64
LIMS2-202ENST00000355119 TRIM29Q14134 588 aa25.29■■□□□ 1.64
LIMS2-202ENST00000355119 NTRK3Q16288 839 aa25.29■■□□□ 1.64
LIMS2-202ENST00000355119 NAT10Q9H0A0 1025 aaKnown RBP25.29■■□□□ 1.64
LIMS2-202ENST00000355119 GNL3LQ9NVN8 582 aaKnown RBP25.29■■□□□ 1.64
LIMS2-202ENST00000355119 UQCRHLA0A096LP55 91 aa25.28■■□□□ 1.64
LIMS2-202ENST00000355119 UQCRHP07919 91 aa25.28■■□□□ 1.64
LIMS2-202ENST00000355119 RXRAP19793 462 aa25.28■■□□□ 1.64
LIMS2-202ENST00000355119 PTGS1P23219 599 aa25.28■■□□□ 1.64
LIMS2-202ENST00000355119 CEP57L1Q8IYX8 460 aa25.28■■□□□ 1.64
LIMS2-202ENST00000355119 NUTM2BA6NNL0 878 aaPredicted RBP25.27■■□□□ 1.64
LIMS2-202ENST00000355119 NUTM2EB1AL46 878 aaPredicted RBP25.27■■□□□ 1.64
LIMS2-202ENST00000355119 SART3Q15020 963 aaKnown RBP25.27■■□□□ 1.64
LIMS2-202ENST00000355119 SLC39A14Q15043 492 aa25.27■■□□□ 1.64
LIMS2-202ENST00000355119 NUTM2AQ8IVF1 878 aaPredicted RBP25.27■■□□□ 1.64
LIMS2-202ENST00000355119 ANKRD18AQ8IVF6 992 aa25.27■■□□□ 1.64
LIMS2-202ENST00000355119 AIFM3Q96NN9 605 aa25.27■■□□□ 1.64
LIMS2-202ENST00000355119 INCENPQ9NQS7 918 aa25.27■■□□□ 1.64
LIMS2-202ENST00000355119 FAM217BQ9NTX9 383 aaPredicted RBP25.27■■□□□ 1.64
LIMS2-202ENST00000355119 PYCARDQ9ULZ3 195 aa25.27■■□□□ 1.64
LIMS2-202ENST00000355119 ZNF804BA4D1E1 1349 aa25.27■■□□□ 1.64
LIMS2-202ENST00000355119 LTBP4Q8N2S1 1624 aa25.27■■□□□ 1.64
LIMS2-202ENST00000355119 BECN2A8MW95 431 aa25.27■■□□□ 1.64
LIMS2-202ENST00000355119 RGL2O15211 777 aa25.27■■□□□ 1.64
LIMS2-202ENST00000355119 PRKAB2O43741 272 aa25.27■■□□□ 1.64
LIMS2-202ENST00000355119 CMA1P23946 247 aa25.27■■□□□ 1.64
LIMS2-202ENST00000355119 SSRP1Q08945 709 aaKnown RBP25.27■■□□□ 1.64
LIMS2-202ENST00000355119 SF3B3Q15393 1217 aaKnown RBP25.27■■□□□ 1.64
LIMS2-202ENST00000355119 VPS37DQ86XT2 251 aa25.27■■□□□ 1.64
LIMS2-202ENST00000355119 WASF1Q92558 559 aa25.27■■□□□ 1.64
LIMS2-202ENST00000355119 PHKBQ93100 1093 aa25.27■■□□□ 1.64
LIMS2-202ENST00000355119 RNF41Q9H4P4 317 aaPredicted RBP25.27■■□□□ 1.64
LIMS2-202ENST00000355119 ECM29Q5VYK3 1845 aa25.26■■□□□ 1.63
LIMS2-202ENST00000355119 GNL2Q13823 731 aaKnown RBP25.26■■□□□ 1.63
LIMS2-202ENST00000355119 CCDC186Q7Z3E2 898 aa25.26■■□□□ 1.63
LIMS2-202ENST00000355119 C17orf53Q8N3J3 647 aaPredicted RBP25.26■■□□□ 1.63
LIMS2-202ENST00000355119 TACC3Q9Y6A5 838 aa25.26■■□□□ 1.63
LIMS2-202ENST00000355119 UBE4AQ14139 1066 aa25.25■■□□□ 1.63
LIMS2-202ENST00000355119 AXDND1Q5T1B0 1012 aaPredicted RBP25.25■■□□□ 1.63
LIMS2-202ENST00000355119 CCDC144CPQ8IYA2 1237 aa25.25■■□□□ 1.63
LIMS2-202ENST00000355119 JMYQ8N9B5 988 aa25.25■■□□□ 1.63
LIMS2-202ENST00000355119 PRIMPOLQ96LW4 560 aa25.25■■□□□ 1.63
LIMS2-202ENST00000355119 FMNL1O95466 1100 aaPredicted RBP25.25■■□□□ 1.63
LIMS2-202ENST00000355119 CYP7A1P22680 504 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms