RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 NSFL1CQ9UNZ2 370 aaKnown RBP8.15□□□□□ -1.1
TRIM55-203ENST00000350034 IQSEC3Q9UPP2 1182 aaPredicted RBP8.15□□□□□ -1.1
TRIM55-203ENST00000350034 CNPY2Q9Y2B0 182 aa8.15□□□□□ -1.1
TRIM55-203ENST00000350034 CACNA1SQ13698 1873 aa8.15□□□□□ -1.11
TRIM55-203ENST00000350034 LAMA4Q16363 1823 aa8.15□□□□□ -1.11
TRIM55-203ENST00000350034 NEDD4P46934 1319 aa8.14□□□□□ -1.11
TRIM55-203ENST00000350034 MAGEB6P1A0A0J9YX57 407 aa8.14□□□□□ -1.11
TRIM55-203ENST00000350034 PTPDC1A2A3K4 754 aa8.14□□□□□ -1.11
TRIM55-203ENST00000350034 VPS37CA5D8V6 355 aaPredicted RBP8.14□□□□□ -1.11
TRIM55-203ENST00000350034 GADD45BO75293 160 aaPredicted RBP8.14□□□□□ -1.11
TRIM55-203ENST00000350034 BBOX1O75936 387 aa8.14□□□□□ -1.11
TRIM55-203ENST00000350034 FGRP09769 529 aa8.14□□□□□ -1.11
TRIM55-203ENST00000350034 XRCC6P12956 609 aaKnown RBP eCLIP8.14□□□□□ -1.11
TRIM55-203ENST00000350034 FDPSP14324 419 aaKnown RBP8.14□□□□□ -1.11
TRIM55-203ENST00000350034 MRE11P49959 708 aa8.14□□□□□ -1.11
TRIM55-203ENST00000350034 DNM1Q05193 864 aaKnown RBP8.14□□□□□ -1.11
TRIM55-203ENST00000350034 TRDNQ13061 729 aa8.14□□□□□ -1.11
TRIM55-203ENST00000350034 AKNAD1Q5T1N1 836 aa8.14□□□□□ -1.11
TRIM55-203ENST00000350034 CAVIN1Q6NZI2 390 aaKnown RBP8.14□□□□□ -1.11
TRIM55-203ENST00000350034 PPP4R3CPQ6ZMV5 832 aa8.14□□□□□ -1.11
TRIM55-203ENST00000350034 SGMS1Q86VZ5 419 aa8.14□□□□□ -1.11
TRIM55-203ENST00000350034 VPS37DQ86XT2 251 aa8.14□□□□□ -1.11
TRIM55-203ENST00000350034 COL23A1Q86Y22 540 aaPredicted RBP8.14□□□□□ -1.11
TRIM55-203ENST00000350034 KLHL34Q8N239 644 aa8.14□□□□□ -1.11
TRIM55-203ENST00000350034 IGDCC4Q8TDY8 1250 aa8.14□□□□□ -1.11
TRIM55-203ENST00000350034 NSUN4Q96CB9 384 aaKnown RBP8.14□□□□□ -1.11
TRIM55-203ENST00000350034 RBM17Q96I25 401 aaKnown RBP8.14□□□□□ -1.11
TRIM55-203ENST00000350034 BRIP1Q9BX63 1249 aa8.14□□□□□ -1.11
TRIM55-203ENST00000350034 CNNM2Q9H8M5 875 aa8.14□□□□□ -1.11
TRIM55-203ENST00000350034 PODXL2Q9NZ53 605 aa8.14□□□□□ -1.11
TRIM55-203ENST00000350034 RAI14Q9P0K7 980 aa8.14□□□□□ -1.11
TRIM55-203ENST00000350034 TMEM63CQ9P1W3 806 aa8.14□□□□□ -1.11
TRIM55-203ENST00000350034 ABCF2Q9UG63 623 aa8.14□□□□□ -1.11
TRIM55-203ENST00000350034 ANGEL1Q9UNK9 670 aaKnown RBP8.14□□□□□ -1.11
TRIM55-203ENST00000350034 SLC4A4Q9Y6R1 1079 aa8.14□□□□□ -1.11
TRIM55-203ENST00000350034 TAF1P21675 1872 aa8.14□□□□□ -1.11
TRIM55-203ENST00000350034 MYO5AQ9Y4I1 1855 aaKnown RBP8.14□□□□□ -1.11
TRIM55-203ENST00000350034 NID2Q14112 1375 aa8.13□□□□□ -1.11
TRIM55-203ENST00000350034 ELP1O95163 1332 aa8.13□□□□□ -1.11
TRIM55-203ENST00000350034 KLF18A0A0U1RQI7 1052 aa8.13□□□□□ -1.11
TRIM55-203ENST00000350034 B4E1Z4 1266 aa8.13□□□□□ -1.11
TRIM55-203ENST00000350034 NPHP1O15259 732 aa8.13□□□□□ -1.11
TRIM55-203ENST00000350034 ATP2B4P23634 1241 aa8.13□□□□□ -1.11
TRIM55-203ENST00000350034 LIFRP42702 1097 aa8.13□□□□□ -1.11
TRIM55-203ENST00000350034 UBE2HP62256 183 aa8.13□□□□□ -1.11
TRIM55-203ENST00000350034 CCT2P78371 535 aaKnown RBP8.13□□□□□ -1.11
TRIM55-203ENST00000350034 GPSM2P81274 684 aa8.13□□□□□ -1.11
TRIM55-203ENST00000350034 MECOMQ03112 1051 aa8.13□□□□□ -1.11
TRIM55-203ENST00000350034 CSPP1Q1MSJ5 1256 aa8.13□□□□□ -1.11
TRIM55-203ENST00000350034 ZSCAN23Q3MJ62 389 aa8.13□□□□□ -1.11
TRIM55-203ENST00000350034 TMC4Q7Z404 712 aa8.13□□□□□ -1.11
TRIM55-203ENST00000350034 SLC51AQ86UW1 340 aa8.13□□□□□ -1.11
TRIM55-203ENST00000350034 NLGN1Q8N2Q7 840 aa8.13□□□□□ -1.11
TRIM55-203ENST00000350034 MIGA1Q8NAN2 632 aa8.13□□□□□ -1.11
TRIM55-203ENST00000350034 FLAD1Q8NFF5 587 aa8.13□□□□□ -1.11
TRIM55-203ENST00000350034 RPGRQ92834 1020 aaKnown RBP8.13□□□□□ -1.11
TRIM55-203ENST00000350034 KRT23Q9C075 422 aa8.13□□□□□ -1.11
TRIM55-203ENST00000350034 ZSCAN16Q9H4T2 348 aaPredicted RBP8.13□□□□□ -1.11
TRIM55-203ENST00000350034 GDPD2Q9HCC8 539 aa8.13□□□□□ -1.11
TRIM55-203ENST00000350034 NCOA5Q9HCD5 579 aaKnown RBP8.13□□□□□ -1.11
TRIM55-203ENST00000350034 RBM27Q9P2N5 1060 aaKnown RBP8.13□□□□□ -1.11
TRIM55-203ENST00000350034 KIF3AQ9Y496 699 aa8.13□□□□□ -1.11
TRIM55-203ENST00000350034 GOLGA8BA8MQT2 603 aa8.12□□□□□ -1.11
TRIM55-203ENST00000350034 DHX16O60231 1041 aaKnown RBP8.12□□□□□ -1.11
TRIM55-203ENST00000350034 APBA3O96018 575 aa8.12□□□□□ -1.11
TRIM55-203ENST00000350034 PCP11498 1178 aaKnown RBP8.12□□□□□ -1.11
TRIM55-203ENST00000350034 IL1R1P14778 569 aa8.12□□□□□ -1.11
TRIM55-203ENST00000350034 PRDX5P30044 214 aa8.12□□□□□ -1.11
TRIM55-203ENST00000350034 ADD1P35611 737 aaKnown RBP8.12□□□□□ -1.11
TRIM55-203ENST00000350034 TDO2P48775 406 aa8.12□□□□□ -1.11
TRIM55-203ENST00000350034 RCAN1P53805 252 aa8.12□□□□□ -1.11
TRIM55-203ENST00000350034 DYNLL1P63167 89 aaKnown RBP8.12□□□□□ -1.11
TRIM55-203ENST00000350034 KRT85P78386 507 aa8.12□□□□□ -1.11
TRIM55-203ENST00000350034 CTDSPL2Q05D32 466 aa8.12□□□□□ -1.11
TRIM55-203ENST00000350034 PPARAQ07869 468 aa8.12□□□□□ -1.11
TRIM55-203ENST00000350034 SPTY2D1Q68D10 685 aaPredicted RBP8.12□□□□□ -1.11
TRIM55-203ENST00000350034 APOA5Q6Q788 366 aa8.12□□□□□ -1.11
TRIM55-203ENST00000350034 MFSD6Q6ZSS7 791 aa8.12□□□□□ -1.11
TRIM55-203ENST00000350034 TTC6Q86TZ1 520 aa8.12□□□□□ -1.11
TRIM55-203ENST00000350034 FAM184AQ8NB25 1140 aa8.12□□□□□ -1.11
TRIM55-203ENST00000350034 WDR66Q8TBY9 1149 aa8.12□□□□□ -1.11
TRIM55-203ENST00000350034 DDX11Q96FC9 970 aa8.12□□□□□ -1.11
TRIM55-203ENST00000350034 RNF41Q9H4P4 317 aaPredicted RBP8.12□□□□□ -1.11
TRIM55-203ENST00000350034 GRPEL1Q9HAV7 217 aa8.12□□□□□ -1.11
TRIM55-203ENST00000350034 LY9Q9HBG7 655 aa8.12□□□□□ -1.11
TRIM55-203ENST00000350034 INCENPQ9NQS7 918 aa8.12□□□□□ -1.11
TRIM55-203ENST00000350034 FAM217BQ9NTX9 383 aaPredicted RBP8.12□□□□□ -1.11
TRIM55-203ENST00000350034 ZSWIM5Q9P217 1185 aa8.12□□□□□ -1.11
TRIM55-203ENST00000350034 ANKIB1Q9P2G1 1089 aa8.12□□□□□ -1.11
TRIM55-203ENST00000350034 NRXN2Q9P2S2 1712 aa8.12□□□□□ -1.11
TRIM55-203ENST00000350034 FIBPO43427 364 aa8.11□□□□□ -1.11
TRIM55-203ENST00000350034 KDM4AO75164 1064 aa8.11□□□□□ -1.11
TRIM55-203ENST00000350034 NCLP19338 710 aaKnown RBP8.11□□□□□ -1.11
TRIM55-203ENST00000350034 PPP4CP60510 307 aa8.11□□□□□ -1.11
TRIM55-203ENST00000350034 CHAF1AQ13111 956 aaPredicted RBP8.11□□□□□ -1.11
TRIM55-203ENST00000350034 FOXD4L6Q3SYB3 417 aaPredicted RBP8.11□□□□□ -1.11
TRIM55-203ENST00000350034 SBK1Q52WX2 424 aa8.11□□□□□ -1.11
TRIM55-203ENST00000350034 ATL3Q6DD88 541 aa8.11□□□□□ -1.11
TRIM55-203ENST00000350034 FOXD4L3Q6VB84 417 aaPredicted RBP8.11□□□□□ -1.11
TRIM55-203ENST00000350034 ZNF804AQ7Z570 1209 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms