RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 COL1A1P02452 1464 aaPredicted RBP24.88■■□□□ 1.57
PTPN18-202ENST00000347849 ZSCAN20P17040 1043 aaPredicted RBP24.88■■□□□ 1.57
PTPN18-202ENST00000347849 FOSBP53539 338 aa24.88■■□□□ 1.57
PTPN18-202ENST00000347849 SMARCC2Q8TAQ2 1214 aa24.88■■□□□ 1.57
PTPN18-202ENST00000347849 NYXQ9GZU5 481 aa24.88■■□□□ 1.57
PTPN18-202ENST00000347849 RFC4P35249 363 aa24.88■■□□□ 1.57
PTPN18-202ENST00000347849 CCDC186Q7Z3E2 898 aa24.88■■□□□ 1.57
PTPN18-202ENST00000347849 ADGRA1Q86SQ6 560 aa24.88■■□□□ 1.57
PTPN18-202ENST00000347849 DRC7Q8IY82 874 aa24.88■■□□□ 1.57
PTPN18-202ENST00000347849 PDCL2Q8N4E4 241 aa24.88■■□□□ 1.57
PTPN18-202ENST00000347849 MIGA1Q8NAN2 632 aa24.88■■□□□ 1.57
PTPN18-202ENST00000347849 LY75O60449 1722 aa24.88■■□□□ 1.57
PTPN18-202ENST00000347849 ZNF804BA4D1E1 1349 aa24.87■■□□□ 1.57
PTPN18-202ENST00000347849 RGL2O15211 777 aa24.87■■□□□ 1.57
PTPN18-202ENST00000347849 PDCP20941 246 aa24.87■■□□□ 1.57
PTPN18-202ENST00000347849 TM4SF1P30408 202 aa24.87■■□□□ 1.57
PTPN18-202ENST00000347849 RPS8P62241 208 aaKnown RBP24.87■■□□□ 1.57
PTPN18-202ENST00000347849 TRAPPC3LQ5T215 181 aa24.87■■□□□ 1.57
PTPN18-202ENST00000347849 TPTE2Q6XPS3 522 aa24.87■■□□□ 1.57
PTPN18-202ENST00000347849 TAF1LQ8IZX4 1826 aa24.87■■□□□ 1.57
PTPN18-202ENST00000347849 ANO6Q4KMQ2 910 aa24.87■■□□□ 1.57
PTPN18-202ENST00000347849 LCORLQ8N3X6 602 aa24.87■■□□□ 1.57
PTPN18-202ENST00000347849 FAM84BQ96KN1 310 aaPredicted RBP24.87■■□□□ 1.57
PTPN18-202ENST00000347849 ZHX1Q9UKY1 873 aaPredicted RBP24.87■■□□□ 1.57
PTPN18-202ENST00000347849 TACC3Q9Y6A5 838 aa24.87■■□□□ 1.57
PTPN18-202ENST00000347849 NCOA7Q8NI08 942 aa24.86■■□□□ 1.57
PTPN18-202ENST00000347849 BCL11BQ9C0K0 894 aaPredicted RBP24.86■■□□□ 1.57
PTPN18-202ENST00000347849 CBX8Q9HC52 389 aa24.86■■□□□ 1.57
PTPN18-202ENST00000347849 LRP2BPQ9P2M1 347 aa24.86■■□□□ 1.57
PTPN18-202ENST00000347849 ABCF2Q9UG63 623 aa24.86■■□□□ 1.57
PTPN18-202ENST00000347849 ELP1O95163 1332 aa24.86■■□□□ 1.57
PTPN18-202ENST00000347849 C4BP0C0L5 1744 aa24.86■■□□□ 1.57
PTPN18-202ENST00000347849 PTPDC1A2A3K4 754 aa24.86■■□□□ 1.57
PTPN18-202ENST00000347849 NFIXQ14938 502 aa24.86■■□□□ 1.57
PTPN18-202ENST00000347849 SPATA32Q96LK8 384 aa24.86■■□□□ 1.57
PTPN18-202ENST00000347849 NRBP1Q9UHY1 535 aa24.86■■□□□ 1.57
PTPN18-202ENST00000347849 SPDYE4A6NLX3 237 aa24.85■■□□□ 1.57
PTPN18-202ENST00000347849 DMTNQ08495 405 aa24.85■■□□□ 1.57
PTPN18-202ENST00000347849 LRMPQ12912 555 aa24.85■■□□□ 1.57
PTPN18-202ENST00000347849 UBE4AQ14139 1066 aa24.85■■□□□ 1.57
PTPN18-202ENST00000347849 CYB5R4Q7L1T6 521 aa24.85■■□□□ 1.57
PTPN18-202ENST00000347849 IFNL3Q8IZI9 196 aa24.85■■□□□ 1.57
PTPN18-202ENST00000347849 ZNF274Q96GC6 653 aaPredicted RBP24.85■■□□□ 1.57
PTPN18-202ENST00000347849 GSG1L2A8MUP6 293 aa24.84■■□□□ 1.57
PTPN18-202ENST00000347849 RALYLQ86SE5 291 aaKnown RBP24.84■■□□□ 1.57
PTPN18-202ENST00000347849 SCAND2PQ9GZW5 306 aaPredicted RBP24.84■■□□□ 1.57
PTPN18-202ENST00000347849 DOCK2Q92608 1830 aa24.84■■□□□ 1.57
PTPN18-202ENST00000347849 COL24A1Q17RW2 1714 aa24.84■■□□□ 1.57
PTPN18-202ENST00000347849 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.84■■□□□ 1.57
PTPN18-202ENST00000347849 FBXL16Q8N461 479 aa24.84■■□□□ 1.57
PTPN18-202ENST00000347849 TRIM5Q9C035 493 aa24.84■■□□□ 1.57
PTPN18-202ENST00000347849 SENP2Q9HC62 589 aa24.84■■□□□ 1.57
PTPN18-202ENST00000347849 PATL2C9JE40 543 aaKnown RBP24.83■■□□□ 1.57
PTPN18-202ENST00000347849 PDIA4P13667 645 aaKnown RBP24.83■■□□□ 1.57
PTPN18-202ENST00000347849 EVCP57679 992 aa24.83■■□□□ 1.57
PTPN18-202ENST00000347849 CTDSPL2Q05D32 466 aa24.83■■□□□ 1.57
PTPN18-202ENST00000347849 TFCP2L1Q9NZI6 479 aa24.83■■□□□ 1.57
PTPN18-202ENST00000347849 HPS5Q9UPZ3 1129 aa24.83■■□□□ 1.57
PTPN18-202ENST00000347849 NEDD4P46934 1319 aa24.83■■□□□ 1.57
PTPN18-202ENST00000347849 A0A1B0GUL6 1792 aa24.83■■□□□ 1.56
PTPN18-202ENST00000347849 B4E1Z4 1266 aa24.83■■□□□ 1.56
PTPN18-202ENST00000347849 C4AP0C0L4 1744 aa24.82■■□□□ 1.56
PTPN18-202ENST00000347849 SALL1Q9NSC2 1324 aa24.82■■□□□ 1.56
PTPN18-202ENST00000347849 KLF18A0A0U1RQI7 1052 aa24.82■■□□□ 1.56
PTPN18-202ENST00000347849 LLPHQ9BRT6 129 aaKnown RBP24.82■■□□□ 1.56
PTPN18-202ENST00000347849 NPHP1O15259 732 aa24.81■■□□□ 1.56
PTPN18-202ENST00000347849 TXNRD3Q86VQ6 643 aa24.81■■□□□ 1.56
PTPN18-202ENST00000347849 ZNF384Q8TF68 577 aa24.81■■□□□ 1.56
PTPN18-202ENST00000347849 LEO1Q8WVC0 666 aaPredicted RBP24.81■■□□□ 1.56
PTPN18-202ENST00000347849 CTIFO43310 598 aaKnown RBP24.81■■□□□ 1.56
PTPN18-202ENST00000347849 TRIM37O94972 964 aa24.81■■□□□ 1.56
PTPN18-202ENST00000347849 FDPSP14324 419 aaKnown RBP24.81■■□□□ 1.56
PTPN18-202ENST00000347849 STK11IPQ8N1F8 1099 aa24.81■■□□□ 1.56
PTPN18-202ENST00000347849 ANKRD7Q92527 254 aa24.81■■□□□ 1.56
PTPN18-202ENST00000347849 SMIM22K7EJ46 135 aa24.8■■□□□ 1.56
PTPN18-202ENST00000347849 CYP7A1P22680 504 aa24.8■■□□□ 1.56
PTPN18-202ENST00000347849 UTP14CQ5TAP6 766 aaKnown RBP24.8■■□□□ 1.56
PTPN18-202ENST00000347849 VPS37DQ86XT2 251 aa24.8■■□□□ 1.56
PTPN18-202ENST00000347849 C16orf45Q96MC5 204 aaPredicted RBP24.8■■□□□ 1.56
PTPN18-202ENST00000347849 TNRC6CQ9HCJ0 1690 aaKnown RBP24.8■■□□□ 1.56
PTPN18-202ENST00000347849 NR1I2O75469 434 aa24.8■■□□□ 1.56
PTPN18-202ENST00000347849 U2AF2P26368 475 aaKnown RBP eCLIP24.8■■□□□ 1.564e-7■■■■□ 26
PTPN18-202ENST00000347849 RESTQ13127 1097 aa24.8■■□□□ 1.56
PTPN18-202ENST00000347849 NAPBQ9H115 298 aa24.8■■□□□ 1.56
PTPN18-202ENST00000347849 RAI14Q9P0K7 980 aa24.8■■□□□ 1.56
PTPN18-202ENST00000347849 SLC4A4Q9Y6R1 1079 aa24.8■■□□□ 1.56
PTPN18-202ENST00000347849 GUCY1B3Q02153 619 aa24.79■■□□□ 1.56
PTPN18-202ENST00000347849 CAVIN4Q5BKX8 364 aa24.79■■□□□ 1.56
PTPN18-202ENST00000347849 DDX19AQ9NUU7 478 aaKnown RBP24.79■■□□□ 1.56
PTPN18-202ENST00000347849 H3BQV1 296 aa24.79■■□□□ 1.56
PTPN18-202ENST00000347849 ZNF75DP51815 510 aa24.79■■□□□ 1.56
PTPN18-202ENST00000347849 ALX1Q15699 326 aa24.79■■□□□ 1.56
PTPN18-202ENST00000347849 IFFO2Q5TF58 517 aa24.79■■□□□ 1.56
PTPN18-202ENST00000347849 FBXO33Q7Z6M2 555 aa24.79■■□□□ 1.56
PTPN18-202ENST00000347849 GOLGA8BA8MQT2 603 aa24.78■■□□□ 1.56
PTPN18-202ENST00000347849 BICD2Q8TD16 824 aa24.78■■□□□ 1.56
PTPN18-202ENST00000347849 SDR42E1Q8WUS8 393 aa24.78■■□□□ 1.56
PTPN18-202ENST00000347849 CLSTN2Q9H4D0 955 aa24.78■■□□□ 1.56
PTPN18-202ENST00000347849 JAG2Q9Y219 1238 aa24.78■■□□□ 1.56
PTPN18-202ENST00000347849 RXRAP19793 462 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms