RNA–Protein interactions for RNA: ENST00000343017.11

SNX18-202, Transcript of sorting nexin 18, humanhuman

BASIC

Gene SNX18, Length 3,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18-202ENST00000343017 RIC3Q7Z5B4 369 aa17.49■□□□□ 0.39
SNX18-202ENST00000343017 PCDHA5Q9Y5H7 936 aa17.49■□□□□ 0.39
SNX18-202ENST00000343017 MYH15Q9Y2K3 1946 aa17.49■□□□□ 0.39
SNX18-202ENST00000343017 CEMIPQ8WUJ3 1361 aa17.49■□□□□ 0.39
SNX18-202ENST00000343017 DHX8Q14562 1220 aaKnown RBP17.48■□□□□ 0.39
SNX18-202ENST00000343017 E2F4Q16254 413 aa17.48■□□□□ 0.39
SNX18-202ENST00000343017 FCHSD1Q86WN1 690 aa17.48■□□□□ 0.39
SNX18-202ENST00000343017 IQUBQ8NA54 791 aa17.48■□□□□ 0.39
SNX18-202ENST00000343017 TUBE1Q9UJT0 475 aa17.48■□□□□ 0.39
SNX18-202ENST00000343017 A0A1B0GUL7 405 aa17.48■□□□□ 0.39
SNX18-202ENST00000343017 ABL1P00519 1130 aa17.48■□□□□ 0.39
SNX18-202ENST00000343017 BRD3Q15059 726 aa17.48■□□□□ 0.39
SNX18-202ENST00000343017 ZNF530Q6P9A1 599 aaPredicted RBP17.48■□□□□ 0.39
SNX18-202ENST00000343017 METTL16Q86W50 562 aaKnown RBP17.48■□□□□ 0.39
SNX18-202ENST00000343017 NEUROD6Q96NK8 337 aa17.48■□□□□ 0.39
SNX18-202ENST00000343017 AGXT2Q9BYV1 514 aa17.48■□□□□ 0.39
SNX18-202ENST00000343017 FMN2Q9NZ56 1722 aa17.48■□□□□ 0.39
SNX18-202ENST00000343017 HSPD1P10809 573 aaKnown RBP17.47■□□□□ 0.39
SNX18-202ENST00000343017 TBX2Q13207 712 aaPredicted RBP17.47■□□□□ 0.39
SNX18-202ENST00000343017 OLFM4Q6UX06 510 aa17.47■□□□□ 0.39
SNX18-202ENST00000343017 LRRC31Q6UY01 552 aa17.47■□□□□ 0.39
SNX18-202ENST00000343017 HDXQ7Z353 690 aa17.47■□□□□ 0.39
SNX18-202ENST00000343017 SRGAP1Q7Z6B7 1085 aa17.47■□□□□ 0.39
SNX18-202ENST00000343017 ZNF274Q96GC6 653 aaPredicted RBP17.47■□□□□ 0.39
SNX18-202ENST00000343017 HOXB7P09629 217 aa17.47■□□□□ 0.39
SNX18-202ENST00000343017 ZC3H6P61129 1189 aaKnown RBP17.47■□□□□ 0.39
SNX18-202ENST00000343017 VSNL1P62760 191 aa17.47■□□□□ 0.39
SNX18-202ENST00000343017 FMR1Q06787 632 aaKnown RBP eCLIP17.47■□□□□ 0.39
SNX18-202ENST00000343017 L1RE1Q9UN81 338 aa17.47■□□□□ 0.39
SNX18-202ENST00000343017 NALCNQ8IZF0 1738 aa17.47■□□□□ 0.39
SNX18-202ENST00000343017 GOLGA6L1Q8N7Z2 621 aa17.47■□□□□ 0.39
SNX18-202ENST00000343017 KLF18A0A0U1RQI7 1052 aa17.46■□□□□ 0.39
SNX18-202ENST00000343017 STX10O60499 249 aa17.46■□□□□ 0.39
SNX18-202ENST00000343017 MAGEA9P43362 315 aa17.46■□□□□ 0.39
SNX18-202ENST00000343017 MYD88Q99836 296 aa17.46■□□□□ 0.39
SNX18-202ENST00000343017 RNF216Q9NWF9 866 aaPredicted RBP17.46■□□□□ 0.39
SNX18-202ENST00000343017 NWD1Q149M9 1564 aa17.46■□□□□ 0.39
SNX18-202ENST00000343017 RXRAP19793 462 aa17.46■□□□□ 0.39
SNX18-202ENST00000343017 KIF23Q02241 960 aaPredicted RBP17.46■□□□□ 0.39
SNX18-202ENST00000343017 PTPN12Q05209 780 aaKnown RBP17.46■□□□□ 0.39
SNX18-202ENST00000343017 ZNF569Q5MCW4 686 aa17.46■□□□□ 0.39
SNX18-202ENST00000343017 CNNM3Q8NE01 707 aa17.46■□□□□ 0.39
SNX18-202ENST00000343017 HAUS7Q99871 368 aa17.46■□□□□ 0.39
SNX18-202ENST00000343017 HDAC5Q9UQL6 1122 aa17.46■□□□□ 0.39
SNX18-202ENST00000343017 IVLP07476 585 aa17.45■□□□□ 0.38
SNX18-202ENST00000343017 TIMM10P62072 90 aa17.45■□□□□ 0.38
SNX18-202ENST00000343017 KBTBD3Q8NAB2 608 aa17.45■□□□□ 0.38
SNX18-202ENST00000343017 SAMSN1Q9NSI8 373 aaKnown RBP17.45■□□□□ 0.38
SNX18-202ENST00000343017 NFE2L3Q9Y4A8 694 aa17.45■□□□□ 0.38
SNX18-202ENST00000343017 GOLGA8BA8MQT2 603 aa17.45■□□□□ 0.38
SNX18-202ENST00000343017 SLC39A14Q15043 492 aa17.45■□□□□ 0.38
SNX18-202ENST00000343017 SPECC1LQ69YQ0 1117 aa17.45■□□□□ 0.38
SNX18-202ENST00000343017 RAD9BQ6WBX8 426 aa17.45■□□□□ 0.38
SNX18-202ENST00000343017 GPATCH11Q8N954 259 aa17.45■□□□□ 0.38
SNX18-202ENST00000343017 C19orf44Q9H6X5 657 aa17.45■□□□□ 0.38
SNX18-202ENST00000343017 CASP8Q14790 479 aa17.45■□□□□ 0.38
SNX18-202ENST00000343017 KIF4BQ2VIQ3 1234 aa17.45■□□□□ 0.38
SNX18-202ENST00000343017 GRAMD1CQ8IYS0 662 aa17.45■□□□□ 0.38
SNX18-202ENST00000343017 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.45■□□□□ 0.38
SNX18-202ENST00000343017 LRRIQ3A6PVS8 624 aaPredicted RBP17.44■□□□□ 0.38
SNX18-202ENST00000343017 CPLX1O14810 134 aa17.44■□□□□ 0.38
SNX18-202ENST00000343017 TEX33O43247 280 aa17.44■□□□□ 0.38
SNX18-202ENST00000343017 HSP90AB3PQ58FF7 597 aa17.44■□□□□ 0.38
SNX18-202ENST00000343017 NOM1Q5C9Z4 860 aaKnown RBP17.44■□□□□ 0.38
SNX18-202ENST00000343017 HPS5Q9UPZ3 1129 aa17.44■□□□□ 0.38
SNX18-202ENST00000343017 GDAP1L1Q96MZ0 367 aa17.44■□□□□ 0.38
SNX18-202ENST00000343017 CDC5LQ99459 802 aaKnown RBP17.44■□□□□ 0.38
SNX18-202ENST00000343017 TEX13AQ9BXU3 409 aaPredicted RBP17.44■□□□□ 0.38
SNX18-202ENST00000343017 FAM204AQ9H8W3 233 aa17.44■□□□□ 0.38
SNX18-202ENST00000343017 NCAPD2Q15021 1401 aa17.43■□□□□ 0.38
SNX18-202ENST00000343017 GOLGA6L9A6NEM1 432 aa17.43■□□□□ 0.38
SNX18-202ENST00000343017 NEURL1BA8MQ27 555 aa17.43■□□□□ 0.38
SNX18-202ENST00000343017 UBE2Q2LH0YL09 131 aa17.43■□□□□ 0.38
SNX18-202ENST00000343017 GCKRQ14397 625 aa17.43■□□□□ 0.38
SNX18-202ENST00000343017 CABLES1Q8TDN4 633 aa17.43■□□□□ 0.38
SNX18-202ENST00000343017 MED15Q96RN5 788 aa17.43■□□□□ 0.38
SNX18-202ENST00000343017 CDC23Q9UJX2 597 aa17.43■□□□□ 0.38
SNX18-202ENST00000343017 UTYO14607 1347 aa17.43■□□□□ 0.38
SNX18-202ENST00000343017 LAMA4Q16363 1823 aa17.43■□□□□ 0.38
SNX18-202ENST00000343017 PALLDQ8WX93 1383 aa17.43■□□□□ 0.38
SNX18-202ENST00000343017 SLC39A6Q13433 755 aa17.43■□□□□ 0.38
SNX18-202ENST00000343017 UBE3BQ7Z3V4 1068 aa17.43■□□□□ 0.38
SNX18-202ENST00000343017 NOA1Q8NC60 698 aaKnown RBP17.43■□□□□ 0.38
SNX18-202ENST00000343017 RABEP2Q9H5N1 569 aa17.43■□□□□ 0.38
SNX18-202ENST00000343017 DENND2AQ9ULE3 1009 aa17.43■□□□□ 0.38
SNX18-202ENST00000343017 HPSEQ9Y251 543 aa17.43■□□□□ 0.38
SNX18-202ENST00000343017 CCDC175P0C221 793 aa17.42■□□□□ 0.38
SNX18-202ENST00000343017 PRR29P0C7W0 189 aa17.42■□□□□ 0.38
SNX18-202ENST00000343017 GUCY2CP25092 1073 aa17.42■□□□□ 0.38
SNX18-202ENST00000343017 RFX5P48382 616 aaPredicted RBP17.42■□□□□ 0.38
SNX18-202ENST00000343017 RIN2Q8WYP3 895 aaPredicted RBP17.42■□□□□ 0.38
SNX18-202ENST00000343017 ATP5J2-PTCD1G3V325 749 aa17.42■□□□□ 0.38
SNX18-202ENST00000343017 M0R2C6 588 aa17.42■□□□□ 0.38
SNX18-202ENST00000343017 PTCD1O75127 700 aaKnown RBP17.42■□□□□ 0.38
SNX18-202ENST00000343017 BRAPQ7Z569 592 aa17.42■□□□□ 0.38
SNX18-202ENST00000343017 PAG1Q9NWQ8 432 aa17.42■□□□□ 0.38
SNX18-202ENST00000343017 ADGRG1Q9Y653 693 aa17.42■□□□□ 0.38
SNX18-202ENST00000343017 MAST3O60307 1309 aa17.42■□□□□ 0.38
SNX18-202ENST00000343017 PRC1O43663 620 aa17.41■□□□□ 0.38
SNX18-202ENST00000343017 PDIA6Q15084 440 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms