RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 SMIM22K7EJ46 135 aa20.33■□□□□ 0.84
FRMD4A-202ENST00000342409 IGSF3O75054 1194 aa20.33■□□□□ 0.84
FRMD4A-202ENST00000342409 CTDSPL2Q05D32 466 aa20.33■□□□□ 0.84
FRMD4A-202ENST00000342409 FBXL16Q8N461 479 aa20.33■□□□□ 0.84
FRMD4A-202ENST00000342409 BRF1Q92994 677 aa20.33■□□□□ 0.84
FRMD4A-202ENST00000342409 CNKSR1Q969H4 720 aa20.33■□□□□ 0.84
FRMD4A-202ENST00000342409 COA1Q9GZY4 146 aa20.33■□□□□ 0.84
FRMD4A-202ENST00000342409 AATFQ9NY61 560 aaKnown RBP eCLIP20.33■□□□□ 0.84
FRMD4A-202ENST00000342409 DDX60LQ5H9U9 1706 aaKnown RBP20.32■□□□□ 0.84
FRMD4A-202ENST00000342409 DZIP1Q86YF9 867 aaKnown RBP20.32■□□□□ 0.84
FRMD4A-202ENST00000342409 NCOA7Q8NI08 942 aa20.32■□□□□ 0.84
FRMD4A-202ENST00000342409 MYH1P12882 1939 aa20.31■□□□□ 0.84
FRMD4A-202ENST00000342409 TDO2P48775 406 aa20.31■□□□□ 0.84
FRMD4A-202ENST00000342409 NUCB2P80303 420 aa20.31■□□□□ 0.84
FRMD4A-202ENST00000342409 DIXDC1Q155Q3 683 aa20.31■□□□□ 0.84
FRMD4A-202ENST00000342409 CYB5R4Q7L1T6 521 aa20.31■□□□□ 0.84
FRMD4A-202ENST00000342409 ECM29Q5VYK3 1845 aa20.31■□□□□ 0.84
FRMD4A-202ENST00000342409 KCNA3P22001 575 aa20.3■□□□□ 0.84
FRMD4A-202ENST00000342409 APOBRQ0VD83 1088 aa20.3■□□□□ 0.84
FRMD4A-202ENST00000342409 DOK7Q18PE1 504 aa20.3■□□□□ 0.84
FRMD4A-202ENST00000342409 RTFDC1Q9BY42 306 aaPredicted RBP20.3■□□□□ 0.84
FRMD4A-202ENST00000342409 NACAP1Q9BZK3 213 aa20.3■□□□□ 0.84
FRMD4A-202ENST00000342409 ZC3H12CQ9C0D7 883 aaKnown RBP20.3■□□□□ 0.84
FRMD4A-202ENST00000342409 ZNF219Q9P2Y4 722 aaPredicted RBP20.3■□□□□ 0.84
FRMD4A-202ENST00000342409 WDR19Q8NEZ3 1342 aa20.3■□□□□ 0.84
FRMD4A-202ENST00000342409 PRC1O43663 620 aa20.3■□□□□ 0.84
FRMD4A-202ENST00000342409 MCM5P33992 734 aa20.3■□□□□ 0.84
FRMD4A-202ENST00000342409 GOLGB1Q14789 3259 aaKnown RBP20.29■□□□□ 0.84
FRMD4A-202ENST00000342409 ZBTB7AO95365 584 aa20.29■□□□□ 0.84
FRMD4A-202ENST00000342409 BRD1O95696 1058 aa20.29■□□□□ 0.84
FRMD4A-202ENST00000342409 EVCP57679 992 aa20.29■□□□□ 0.84
FRMD4A-202ENST00000342409 GTF2IP78347 998 aa20.29■□□□□ 0.84
FRMD4A-202ENST00000342409 STK3Q13188 491 aa20.29■□□□□ 0.84
FRMD4A-202ENST00000342409 MFSD14BQ5SR56 506 aa20.29■□□□□ 0.84
FRMD4A-202ENST00000342409 GTF3C6Q969F1 213 aa20.29■□□□□ 0.84
FRMD4A-202ENST00000342409 ANAPC4Q9UJX5 808 aa20.29■□□□□ 0.84
FRMD4A-202ENST00000342409 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.29■□□□□ 0.84
FRMD4A-202ENST00000342409 MROH7-TTC4A0A0A0MT08 1334 aa20.28■□□□□ 0.84
FRMD4A-202ENST00000342409 B4E1Z4 1266 aa20.28■□□□□ 0.84
FRMD4A-202ENST00000342409 MCM4P33991 863 aa20.28■□□□□ 0.84
FRMD4A-202ENST00000342409 EVX2Q03828 476 aa20.28■□□□□ 0.84
FRMD4A-202ENST00000342409 PPARAQ07869 468 aa20.28■□□□□ 0.84
FRMD4A-202ENST00000342409 AKNAD1Q5T1N1 836 aa20.28■□□□□ 0.84
FRMD4A-202ENST00000342409 GIMAP6Q6P9H5 292 aa20.28■□□□□ 0.84
FRMD4A-202ENST00000342409 CLEC17AQ6ZS10 378 aa20.28■□□□□ 0.84
FRMD4A-202ENST00000342409 CERS5Q8N5B7 392 aa20.28■□□□□ 0.84
FRMD4A-202ENST00000342409 STAG1Q8WVM7 1258 aa20.28■□□□□ 0.84
FRMD4A-202ENST00000342409 CYP2D7A0A087X1C5 515 aa20.27■□□□□ 0.84
FRMD4A-202ENST00000342409 PFKFB2O60825 505 aa20.27■□□□□ 0.84
FRMD4A-202ENST00000342409 PPP4CP60510 307 aa20.27■□□□□ 0.84
FRMD4A-202ENST00000342409 RALYLQ86SE5 291 aaKnown RBP20.27■□□□□ 0.84
FRMD4A-202ENST00000342409 TBC1D22AQ8WUA7 517 aa20.27■□□□□ 0.84
FRMD4A-202ENST00000342409 DCP1AQ9NPI6 582 aaPredicted RBP20.27■□□□□ 0.84
FRMD4A-202ENST00000342409 SMC3Q9UQE7 1217 aa20.27■□□□□ 0.84
FRMD4A-202ENST00000342409 DPEP1P16444 411 aa20.27■□□□□ 0.83
FRMD4A-202ENST00000342409 GJB2P29033 226 aa20.27■□□□□ 0.83
FRMD4A-202ENST00000342409 GSTO1P78417 241 aa20.27■□□□□ 0.83
FRMD4A-202ENST00000342409 CTR9Q6PD62 1173 aa20.27■□□□□ 0.83
FRMD4A-202ENST00000342409 SH3RF3Q8TEJ3 882 aaPredicted RBP20.27■□□□□ 0.83
FRMD4A-202ENST00000342409 EYA3Q99504 573 aa20.27■□□□□ 0.83
FRMD4A-202ENST00000342409 CRNKL1Q9BZJ0 848 aaKnown RBP20.27■□□□□ 0.83
FRMD4A-202ENST00000342409 TMX4Q9H1E5 349 aaPredicted RBP20.27■□□□□ 0.83
FRMD4A-202ENST00000342409 MKRN1Q9UHC7 482 aaKnown RBP20.27■□□□□ 0.83
FRMD4A-202ENST00000342409 FGD1P98174 961 aa20.26■□□□□ 0.83
FRMD4A-202ENST00000342409 SCRN1Q12765 414 aa20.26■□□□□ 0.83
FRMD4A-202ENST00000342409 UPF1Q92900 1129 aaKnown RBP eCLIP20.26■□□□□ 0.83
FRMD4A-202ENST00000342409 MXD3Q9BW11 206 aa20.26■□□□□ 0.83
FRMD4A-202ENST00000342409 KCNQ5Q9NR82 932 aa20.26■□□□□ 0.83
FRMD4A-202ENST00000342409 BRPF3Q9ULD4 1205 aa20.26■□□□□ 0.83
FRMD4A-202ENST00000342409 ATF5Q9Y2D1 282 aaPredicted RBP20.26■□□□□ 0.83
FRMD4A-202ENST00000342409 GAKO14976 1311 aa20.26■□□□□ 0.83
FRMD4A-202ENST00000342409 PDIA3P30101 505 aaKnown RBP20.25■□□□□ 0.83
FRMD4A-202ENST00000342409 TRDNQ13061 729 aa20.25■□□□□ 0.83
FRMD4A-202ENST00000342409 FAM163AQ96GL9 167 aaPredicted RBP20.25■□□□□ 0.83
FRMD4A-202ENST00000342409 DBNDD1Q9H9R9 158 aa20.25■□□□□ 0.83
FRMD4A-202ENST00000342409 ATP8A2Q9NTI2 1148 aa20.25■□□□□ 0.83
FRMD4A-202ENST00000342409 FER1L6Q2WGJ9 1857 aa20.25■□□□□ 0.83
FRMD4A-202ENST00000342409 GPR75-ASB3A0A0A6YYF3 556 aa20.24■□□□□ 0.83
FRMD4A-202ENST00000342409 MINDY4BA8MYZ0 360 aa20.24■□□□□ 0.83
FRMD4A-202ENST00000342409 SH2B2O14492 632 aaPredicted RBP20.24■□□□□ 0.83
FRMD4A-202ENST00000342409 C21orf2O43822 256 aa20.24■□□□□ 0.83
FRMD4A-202ENST00000342409 LDHCP07864 332 aa20.24■□□□□ 0.83
FRMD4A-202ENST00000342409 ZNF274Q96GC6 653 aaPredicted RBP20.24■□□□□ 0.83
FRMD4A-202ENST00000342409 SENP2Q9HC62 589 aa20.24■□□□□ 0.83
FRMD4A-202ENST00000342409 ZSWIM5Q9P217 1185 aa20.24■□□□□ 0.83
FRMD4A-202ENST00000342409 USP17L12C9JPN9 530 aa20.24■□□□□ 0.83
FRMD4A-202ENST00000342409 USP17L21D6R901 530 aa20.24■□□□□ 0.83
FRMD4A-202ENST00000342409 SYT1P21579 422 aa20.24■□□□□ 0.83
FRMD4A-202ENST00000342409 R3HDM1Q15032 1099 aaKnown RBP20.24■□□□□ 0.83
FRMD4A-202ENST00000342409 MFSD6Q6ZSS7 791 aa20.24■□□□□ 0.83
FRMD4A-202ENST00000342409 TTLL6Q8N841 843 aa20.24■□□□□ 0.83
FRMD4A-202ENST00000342409 IGDCC4Q8TDY8 1250 aa20.24■□□□□ 0.83
FRMD4A-202ENST00000342409 HPS5Q9UPZ3 1129 aa20.24■□□□□ 0.83
FRMD4A-202ENST00000342409 COL4A5P29400 1685 aa20.23■□□□□ 0.83
FRMD4A-202ENST00000342409 JAK2O60674 1132 aa20.23■□□□□ 0.83
FRMD4A-202ENST00000342409 KDM4AO75164 1064 aa20.23■□□□□ 0.83
FRMD4A-202ENST00000342409 BAG4O95429 457 aaKnown RBP20.23■□□□□ 0.83
FRMD4A-202ENST00000342409 CTDNEP1O95476 244 aa20.23■□□□□ 0.83
FRMD4A-202ENST00000342409 FGRP09769 529 aa20.23■□□□□ 0.83
FRMD4A-202ENST00000342409 CYP2D6P10635 497 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms