RNA–Protein interactions for RNA: ENST00000341421.7

TRAK1-202, Transcript of trafficking kinesin protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAK1, Length 4,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-202ENST00000341421 CCDC194A0A1B0GVG4 234 aa13.37□□□□□ -0.27
TRAK1-202ENST00000341421 B4E1Z4 1266 aa13.37□□□□□ -0.27
TRAK1-202ENST00000341421 PPP2R5BQ15173 497 aa13.37□□□□□ -0.27
TRAK1-202ENST00000341421 PARP10Q53GL7 1025 aa13.37□□□□□ -0.27
TRAK1-202ENST00000341421 SPTY2D1Q68D10 685 aaPredicted RBP13.37□□□□□ -0.27
TRAK1-202ENST00000341421 ZBTB38Q8NAP3 1195 aaPredicted RBP13.37□□□□□ -0.27
TRAK1-202ENST00000341421 KCNF1Q9H3M0 494 aa13.37□□□□□ -0.27
TRAK1-202ENST00000341421 RMND1Q9NWS8 449 aa13.37□□□□□ -0.27
TRAK1-202ENST00000341421 CEP170BQ9Y4F5 1589 aaPredicted RBP13.37□□□□□ -0.27
TRAK1-202ENST00000341421 CDC25BP30305 580 aa13.37□□□□□ -0.27
TRAK1-202ENST00000341421 IQCEQ6IPM2 695 aa13.37□□□□□ -0.27
TRAK1-202ENST00000341421 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.37□□□□□ -0.27
TRAK1-202ENST00000341421 NRBP1Q9UHY1 535 aa13.37□□□□□ -0.27
TRAK1-202ENST00000341421 MROH5Q6ZUA9 1318 aa13.37□□□□□ -0.27
TRAK1-202ENST00000341421 HEG1Q9ULI3 1381 aa13.37□□□□□ -0.27
TRAK1-202ENST00000341421 MYO5BQ9ULV0 1848 aa13.37□□□□□ -0.27
TRAK1-202ENST00000341421 POTEB2H3BUK9 544 aa13.37□□□□□ -0.27
TRAK1-202ENST00000341421 MBD4O95243 580 aa13.37□□□□□ -0.27
TRAK1-202ENST00000341421 CCDC178Q5BJE1 867 aa13.37□□□□□ -0.27
TRAK1-202ENST00000341421 KIAA1468Q9P260 1216 aa13.37□□□□□ -0.27
TRAK1-202ENST00000341421 AK9Q5TCS8 1911 aa13.37□□□□□ -0.27
TRAK1-202ENST00000341421 DEXIO95424 95 aa13.36□□□□□ -0.27
TRAK1-202ENST00000341421 HNRNPH2P55795 449 aaKnown RBP13.36□□□□□ -0.27
TRAK1-202ENST00000341421 RESTQ13127 1097 aa13.36□□□□□ -0.27
TRAK1-202ENST00000341421 FBXO38Q6PIJ6 1188 aa13.36□□□□□ -0.27
TRAK1-202ENST00000341421 RTEL1Q9NZ71 1219 aa13.36□□□□□ -0.27
TRAK1-202ENST00000341421 EPS15P42566 896 aa13.36□□□□□ -0.27
TRAK1-202ENST00000341421 EIF5P55010 431 aaKnown RBP13.36□□□□□ -0.27
TRAK1-202ENST00000341421 ERCC6LQ2NKX8 1250 aa13.36□□□□□ -0.27
TRAK1-202ENST00000341421 TTC31Q49AM3 519 aaPredicted RBP13.36□□□□□ -0.27
TRAK1-202ENST00000341421 LRRC24Q50LG9 513 aa13.36□□□□□ -0.27
TRAK1-202ENST00000341421 BICDL1Q6ZP65 573 aa13.36□□□□□ -0.27
TRAK1-202ENST00000341421 DNAJC10Q8IXB1 793 aa13.36□□□□□ -0.27
TRAK1-202ENST00000341421 CCDC148Q8NFR7 591 aa13.36□□□□□ -0.27
TRAK1-202ENST00000341421 SMARCC1Q92922 1105 aaPredicted RBP13.36□□□□□ -0.27
TRAK1-202ENST00000341421 CCDC102AQ96A19 550 aa13.36□□□□□ -0.27
TRAK1-202ENST00000341421 MAGEB6P1A0A0J9YX57 407 aa13.36□□□□□ -0.27
TRAK1-202ENST00000341421 H7C1W4 665 aa13.36□□□□□ -0.27
TRAK1-202ENST00000341421 GNG11P61952 73 aa13.36□□□□□ -0.27
TRAK1-202ENST00000341421 ZSCAN26Q16670 478 aa13.36□□□□□ -0.27
TRAK1-202ENST00000341421 SLFNL1Q499Z3 407 aa13.36□□□□□ -0.27
TRAK1-202ENST00000341421 KRT40Q6A162 431 aa13.36□□□□□ -0.27
TRAK1-202ENST00000341421 LRRC8AQ8IWT6 810 aa13.36□□□□□ -0.27
TRAK1-202ENST00000341421 CACTINQ8WUQ7 758 aaKnown RBP13.36□□□□□ -0.27
TRAK1-202ENST00000341421 MAST3O60307 1309 aa13.36□□□□□ -0.27
TRAK1-202ENST00000341421 TOB2Q14106 344 aaPredicted RBP13.36□□□□□ -0.27
TRAK1-202ENST00000341421 NAA30Q147X3 362 aaPredicted RBP13.36□□□□□ -0.27
TRAK1-202ENST00000341421 KIF4BQ2VIQ3 1234 aa13.36□□□□□ -0.27
TRAK1-202ENST00000341421 JAKMIP3Q5VZ66 844 aa13.36□□□□□ -0.27
TRAK1-202ENST00000341421 GPATCH11Q8N954 259 aa13.36□□□□□ -0.27
TRAK1-202ENST00000341421 FBXO18Q8NFZ0 1043 aa13.36□□□□□ -0.27
TRAK1-202ENST00000341421 CCDC12Q8WUD4 166 aaPredicted RBP13.36□□□□□ -0.27
TRAK1-202ENST00000341421 EFCC1Q9HA90 598 aa13.36□□□□□ -0.27
TRAK1-202ENST00000341421 TSPY2A6NKD2 308 aa13.35□□□□□ -0.27
TRAK1-202ENST00000341421 ZNF444Q8N0Y2 327 aaPredicted RBP13.35□□□□□ -0.27
TRAK1-202ENST00000341421 KCNH3Q9ULD8 1083 aa13.35□□□□□ -0.27
TRAK1-202ENST00000341421 RPAP1Q9BWH6 1393 aaPredicted RBP13.35□□□□□ -0.27
TRAK1-202ENST00000341421 ZPR1O75312 459 aa13.35□□□□□ -0.27
TRAK1-202ENST00000341421 FGAP02671 866 aa13.35□□□□□ -0.27
TRAK1-202ENST00000341421 LDHCP07864 332 aa13.35□□□□□ -0.27
TRAK1-202ENST00000341421 GNAQP50148 359 aa13.35□□□□□ -0.27
TRAK1-202ENST00000341421 KMT5BQ4FZB7 885 aa13.35□□□□□ -0.27
TRAK1-202ENST00000341421 OTUD7BQ6GQQ9 843 aa13.35□□□□□ -0.27
TRAK1-202ENST00000341421 NUTM2AQ8IVF1 878 aaPredicted RBP13.35□□□□□ -0.27
TRAK1-202ENST00000341421 NEK11Q8NG66 645 aa13.35□□□□□ -0.27
TRAK1-202ENST00000341421 RIMBP3CA6NJZ7 1639 aa13.35□□□□□ -0.27
TRAK1-202ENST00000341421 RIMBP3BA6NNM3 1639 aa13.35□□□□□ -0.27
TRAK1-202ENST00000341421 RIMBP3Q9UFD9 1639 aa13.35□□□□□ -0.27
TRAK1-202ENST00000341421 TMEM94Q12767 1356 aa13.35□□□□□ -0.27
TRAK1-202ENST00000341421 RBM28Q9NW13 759 aaKnown RBP13.35□□□□□ -0.27
TRAK1-202ENST00000341421 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.35□□□□□ -0.273e-7■■□□□ 13.2
TRAK1-202ENST00000341421 CMA1P23946 247 aa13.35□□□□□ -0.27
TRAK1-202ENST00000341421 RBM6P78332 1123 aaKnown RBP13.35□□□□□ -0.27
TRAK1-202ENST00000341421 HELBQ8NG08 1087 aaPredicted RBP13.35□□□□□ -0.27
TRAK1-202ENST00000341421 KAT14Q9H8E8 782 aa13.35□□□□□ -0.27
TRAK1-202ENST00000341421 BMP2KQ9NSY1 1161 aaPredicted RBP13.35□□□□□ -0.27
TRAK1-202ENST00000341421 SEC63Q9UGP8 760 aaKnown RBP13.35□□□□□ -0.27
TRAK1-202ENST00000341421 NIP7Q9Y221 180 aaKnown RBP eCLIP13.35□□□□□ -0.27
TRAK1-202ENST00000341421 FANCCQ00597 558 aa13.34□□□□□ -0.27
TRAK1-202ENST00000341421 EPHA10Q5JZY3 1008 aa13.34□□□□□ -0.27
TRAK1-202ENST00000341421 FAM107BQ9H098 131 aa13.34□□□□□ -0.27
TRAK1-202ENST00000341421 OVOS2A0A0G2JMS6 1433 aa13.34□□□□□ -0.27
TRAK1-202ENST00000341421 ZMYM6O95789 1325 aa13.34□□□□□ -0.27
TRAK1-202ENST00000341421 ZNF532Q9HCE3 1301 aa13.34□□□□□ -0.27
TRAK1-202ENST00000341421 H0YHG0 523 aa13.34□□□□□ -0.27
TRAK1-202ENST00000341421 RXRAP19793 462 aa13.34□□□□□ -0.27
TRAK1-202ENST00000341421 CALML3P27482 149 aa13.34□□□□□ -0.27
TRAK1-202ENST00000341421 KRT2P35908 639 aa13.34□□□□□ -0.27
TRAK1-202ENST00000341421 ATP6V1AP38606 617 aa13.34□□□□□ -0.27
TRAK1-202ENST00000341421 CTSWP56202 376 aa13.34□□□□□ -0.27
TRAK1-202ENST00000341421 UBE3CQ15386 1083 aa13.34□□□□□ -0.27
TRAK1-202ENST00000341421 ZFP91Q96JP5 570 aaPredicted RBP13.34□□□□□ -0.27
TRAK1-202ENST00000341421 PCDHA7Q9UN72 937 aa13.34□□□□□ -0.27
TRAK1-202ENST00000341421 CARMIL3Q8ND23 1372 aa13.34□□□□□ -0.27
TRAK1-202ENST00000341421 UTYO14607 1347 aa13.34□□□□□ -0.27
TRAK1-202ENST00000341421 WDR17Q8IZU2 1322 aa13.34□□□□□ -0.27
TRAK1-202ENST00000341421 CAPN2P17655 700 aa13.34□□□□□ -0.27
TRAK1-202ENST00000341421 SAMD1Q6SPF0 538 aaPredicted RBP13.34□□□□□ -0.27
TRAK1-202ENST00000341421 MLKLQ8NB16 471 aa13.34□□□□□ -0.27
TRAK1-202ENST00000341421 NUP88Q99567 741 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms