RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 SSBP05455 408 aaKnown RBP eCLIP10.74□□□□□ -0.69
FNDC3B-201ENST00000336824 PHKA1P46020 1223 aa10.74□□□□□ -0.69
FNDC3B-201ENST00000336824 NBPF10Q6P3W6 841 aaKnown RBP10.74□□□□□ -0.69
FNDC3B-201ENST00000336824 NBPF15Q8N660 670 aa10.74□□□□□ -0.69
FNDC3B-201ENST00000336824 USP40Q9NVE5 1235 aa10.74□□□□□ -0.69
FNDC3B-201ENST00000336824 TMOD4Q9NZQ9 345 aa10.74□□□□□ -0.69
FNDC3B-201ENST00000336824 CTAGE5O15320 804 aa10.74□□□□□ -0.69
FNDC3B-201ENST00000336824 MCM4P33991 863 aa10.74□□□□□ -0.69
FNDC3B-201ENST00000336824 RAB3GAP1Q15042 981 aa10.74□□□□□ -0.69
FNDC3B-201ENST00000336824 LZTS2Q9BRK4 669 aa10.74□□□□□ -0.69
FNDC3B-201ENST00000336824 COA1Q9GZY4 146 aa10.74□□□□□ -0.69
FNDC3B-201ENST00000336824 C6orf50Q9HD87 102 aa10.74□□□□□ -0.69
FNDC3B-201ENST00000336824 PXDNQ92626 1479 aa10.74□□□□□ -0.69
FNDC3B-201ENST00000336824 EIF5P55010 431 aaKnown RBP10.74□□□□□ -0.69
FNDC3B-201ENST00000336824 TGFBRAP1Q8WUH2 860 aa10.74□□□□□ -0.69
FNDC3B-201ENST00000336824 LARP6Q9BRS8 491 aaKnown RBP10.74□□□□□ -0.69
FNDC3B-201ENST00000336824 NAPAP54920 295 aa10.74□□□□□ -0.69
FNDC3B-201ENST00000336824 DOK7Q18PE1 504 aa10.74□□□□□ -0.69
FNDC3B-201ENST00000336824 DCAF15Q66K64 600 aa10.74□□□□□ -0.69
FNDC3B-201ENST00000336824 PLA2G12BQ9BX93 195 aa10.74□□□□□ -0.69
FNDC3B-201ENST00000336824 GOPCQ9HD26 462 aa10.74□□□□□ -0.69
FNDC3B-201ENST00000336824 ABCC6O95255 1503 aa10.74□□□□□ -0.69
FNDC3B-201ENST00000336824 AK2P54819 239 aa10.73□□□□□ -0.69
FNDC3B-201ENST00000336824 CALML4Q96GE6 196 aa10.73□□□□□ -0.69
FNDC3B-201ENST00000336824 GLT8D2Q9H1C3 349 aa10.73□□□□□ -0.69
FNDC3B-201ENST00000336824 ATF5Q9Y2D1 282 aaPredicted RBP10.73□□□□□ -0.69
FNDC3B-201ENST00000336824 LLPHQ9BRT6 129 aaKnown RBP10.73□□□□□ -0.69
FNDC3B-201ENST00000336824 LINC00116Q8NCU8 138 aa10.73□□□□□ -0.69
FNDC3B-201ENST00000336824 BRIP1Q9BX63 1249 aa10.73□□□□□ -0.69
FNDC3B-201ENST00000336824 RGS12O14924 1447 aa10.73□□□□□ -0.69
FNDC3B-201ENST00000336824 B4E1Z4 1266 aa10.73□□□□□ -0.69
FNDC3B-201ENST00000336824 ADORA1P30542 326 aa10.73□□□□□ -0.69
FNDC3B-201ENST00000336824 SPDYE3A6NKU9 549 aa10.73□□□□□ -0.69
FNDC3B-201ENST00000336824 SHPRHQ149N8 1683 aa10.73□□□□□ -0.69
FNDC3B-201ENST00000336824 AMPD3Q01432 767 aa10.72□□□□□ -0.69
FNDC3B-201ENST00000336824 NOC3LQ8WTT2 800 aaKnown RBP10.72□□□□□ -0.69
FNDC3B-201ENST00000336824 NASPP49321 788 aaPredicted RBP10.72□□□□□ -0.69
FNDC3B-201ENST00000336824 MRE11P49959 708 aa10.72□□□□□ -0.69
FNDC3B-201ENST00000336824 MAP3K11Q16584 847 aa10.72□□□□□ -0.69
FNDC3B-201ENST00000336824 KANK3Q6NY19 840 aa10.72□□□□□ -0.69
FNDC3B-201ENST00000336824 ATP8A2Q9NTI2 1148 aa10.72□□□□□ -0.69
FNDC3B-201ENST00000336824 NECAB1Q8N987 351 aa10.72□□□□□ -0.69
FNDC3B-201ENST00000336824 LRRC27Q9C0I9 530 aa10.72□□□□□ -0.69
FNDC3B-201ENST00000336824 ZSCAN22P10073 491 aaPredicted RBP10.72□□□□□ -0.69
FNDC3B-201ENST00000336824 APOBRQ0VD83 1088 aa10.72□□□□□ -0.69
FNDC3B-201ENST00000336824 AKNAD1Q5T1N1 836 aa10.72□□□□□ -0.69
FNDC3B-201ENST00000336824 TM6SF1Q9BZW5 370 aa10.72□□□□□ -0.69
FNDC3B-201ENST00000336824 USP17L3A6NCW0 530 aa10.72□□□□□ -0.69
FNDC3B-201ENST00000336824 USP17L4A6NCW7 530 aa10.72□□□□□ -0.69
FNDC3B-201ENST00000336824 USP17L1Q7RTZ2 530 aa10.72□□□□□ -0.69
FNDC3B-201ENST00000336824 ERMNQ8TAM6 284 aa10.72□□□□□ -0.69
FNDC3B-201ENST00000336824 TCEANC2Q96MN5 208 aa10.72□□□□□ -0.69
FNDC3B-201ENST00000336824 USP48Q86UV5 1035 aa10.71□□□□□ -0.69
FNDC3B-201ENST00000336824 MAPKAPK5Q8IW41 473 aa10.71□□□□□ -0.69
FNDC3B-201ENST00000336824 MYO3BQ8WXR4 1341 aa10.71□□□□□ -0.69
FNDC3B-201ENST00000336824 SETD1AO15047 1707 aaKnown RBP10.71□□□□□ -0.69
FNDC3B-201ENST00000336824 NFIXQ14938 502 aa10.71□□□□□ -0.69
FNDC3B-201ENST00000336824 CHST3Q7LGC8 479 aa10.71□□□□□ -0.69
FNDC3B-201ENST00000336824 KIAA0825Q8IV33 1275 aa10.71□□□□□ -0.69
FNDC3B-201ENST00000336824 KCNG4Q8TDN1 519 aa10.71□□□□□ -0.69
FNDC3B-201ENST00000336824 SLC16A10Q8TF71 515 aa10.71□□□□□ -0.69
FNDC3B-201ENST00000336824 NDUFB9Q9Y6M9 179 aa10.71□□□□□ -0.69
FNDC3B-201ENST00000336824 KIF20AO95235 890 aa10.71□□□□□ -0.69
FNDC3B-201ENST00000336824 KRT2P35908 639 aa10.71□□□□□ -0.69
FNDC3B-201ENST00000336824 RAB11FIP4Q86YS3 637 aa10.71□□□□□ -0.69
FNDC3B-201ENST00000336824 SMARCC2Q8TAQ2 1214 aa10.71□□□□□ -0.69
FNDC3B-201ENST00000336824 SMARCE1Q969G3 411 aa10.71□□□□□ -0.69
FNDC3B-201ENST00000336824 HSPA4P34932 840 aa10.71□□□□□ -0.7
FNDC3B-201ENST00000336824 NT5C2P49902 561 aa10.71□□□□□ -0.7
FNDC3B-201ENST00000336824 TCP10Q12799 353 aa10.71□□□□□ -0.7
FNDC3B-201ENST00000336824 SMTNL1A8MU46 457 aa10.71□□□□□ -0.7
FNDC3B-201ENST00000336824 CAMTA2O94983 1202 aa10.71□□□□□ -0.7
FNDC3B-201ENST00000336824 PPARAQ07869 468 aa10.71□□□□□ -0.7
FNDC3B-201ENST00000336824 NAP1L4Q99733 375 aaKnown RBP10.71□□□□□ -0.7
FNDC3B-201ENST00000336824 TAOK3Q9H2K8 898 aa10.71□□□□□ -0.7
FNDC3B-201ENST00000336824 ABCC12Q96J65 1359 aa10.71□□□□□ -0.7
FNDC3B-201ENST00000336824 OFD1O75665 1012 aa10.71□□□□□ -0.7
FNDC3B-201ENST00000336824 AS3MTQ9HBK9 375 aa10.71□□□□□ -0.7
FNDC3B-201ENST00000336824 NFAT5O94916 1531 aa10.7□□□□□ -0.7
FNDC3B-201ENST00000336824 BTDP43251 543 aa10.7□□□□□ -0.7
FNDC3B-201ENST00000336824 ZNF34Q8IZ26 560 aa10.7□□□□□ -0.7
FNDC3B-201ENST00000336824 IFNL3Q8IZI9 196 aa10.7□□□□□ -0.7
FNDC3B-201ENST00000336824 DCPSQ96C86 337 aaKnown RBP10.7□□□□□ -0.7
FNDC3B-201ENST00000336824 SWAP70Q9UH65 585 aa10.7□□□□□ -0.7
FNDC3B-201ENST00000336824 MINPP1Q9UNW1 487 aa10.7□□□□□ -0.7
FNDC3B-201ENST00000336824 SNX14Q9Y5W7 946 aa10.7□□□□□ -0.7
FNDC3B-201ENST00000336824 PPP1R12BO60237 982 aaPredicted RBP10.7□□□□□ -0.7
FNDC3B-201ENST00000336824 GSPT1P15170 499 aaKnown RBP10.7□□□□□ -0.7
FNDC3B-201ENST00000336824 UBA7P41226 1012 aa10.7□□□□□ -0.7
FNDC3B-201ENST00000336824 KDM6AO15550 1401 aaPredicted RBP10.7□□□□□ -0.7
FNDC3B-201ENST00000336824 CAMTA1Q9Y6Y1 1673 aa10.7□□□□□ -0.7
FNDC3B-201ENST00000336824 CCDC183Q5T5S1 534 aa10.7□□□□□ -0.7
FNDC3B-201ENST00000336824 BRAPQ7Z569 592 aa10.7□□□□□ -0.7
FNDC3B-201ENST00000336824 NAP1L5Q96NT1 182 aaPredicted RBP10.7□□□□□ -0.7
FNDC3B-201ENST00000336824 TRIM5Q9C035 493 aa10.7□□□□□ -0.7
FNDC3B-201ENST00000336824 PLS1Q14651 629 aa10.7□□□□□ -0.7
FNDC3B-201ENST00000336824 CSADQ9Y600 493 aa10.7□□□□□ -0.7
FNDC3B-201ENST00000336824 ITPK1Q13572 414 aa10.7□□□□□ -0.7
FNDC3B-201ENST00000336824 SULF1Q8IWU6 871 aa10.7□□□□□ -0.7
FNDC3B-201ENST00000336824 BCL9O00512 1426 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms