RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 ZBTB22O15209 634 aa12.49□□□□□ -0.41
CCDC172-201ENST00000333254 CMA1P23946 247 aa12.49□□□□□ -0.41
CCDC172-201ENST00000333254 METAP2P50579 478 aaKnown RBP eCLIP12.49□□□□□ -0.41
CCDC172-201ENST00000333254 RBM6P78332 1123 aaKnown RBP12.49□□□□□ -0.41
CCDC172-201ENST00000333254 ANO1Q5XXA6 986 aa12.49□□□□□ -0.41
CCDC172-201ENST00000333254 INTS5Q6P9B9 1019 aaKnown RBP12.49□□□□□ -0.41
CCDC172-201ENST00000333254 SYNE3Q6ZMZ3 975 aa12.49□□□□□ -0.41
CCDC172-201ENST00000333254 ELOA2Q8IYF1 753 aaPredicted RBP12.49□□□□□ -0.41
CCDC172-201ENST00000333254 JMYQ8N9B5 988 aa12.49□□□□□ -0.41
CCDC172-201ENST00000333254 IGDCC4Q8TDY8 1250 aa12.49□□□□□ -0.41
CCDC172-201ENST00000333254 AIDAQ96BJ3 306 aa12.49□□□□□ -0.41
CCDC172-201ENST00000333254 UTP14AQ9BVJ6 771 aaKnown RBP12.49□□□□□ -0.41
CCDC172-201ENST00000333254 KRT23Q9C075 422 aa12.49□□□□□ -0.41
CCDC172-201ENST00000333254 FTOQ9C0B1 505 aaKnown RBP eCLIP12.49□□□□□ -0.41
CCDC172-201ENST00000333254 PYCARDQ9ULZ3 195 aa12.49□□□□□ -0.41
CCDC172-201ENST00000333254 COL24A1Q17RW2 1714 aa12.49□□□□□ -0.41
CCDC172-201ENST00000333254 IDH1O75874 414 aaKnown RBP12.48□□□□□ -0.41
CCDC172-201ENST00000333254 CEBPZQ03701 1054 aaKnown RBP12.48□□□□□ -0.41
CCDC172-201ENST00000333254 SLC39A14Q15043 492 aa12.48□□□□□ -0.41
CCDC172-201ENST00000333254 NTRK3Q16288 839 aa12.48□□□□□ -0.41
CCDC172-201ENST00000333254 CCDC152Q4G0S7 254 aa12.48□□□□□ -0.41
CCDC172-201ENST00000333254 DNTTIP2Q5QJE6 756 aaKnown RBP12.48□□□□□ -0.41
CCDC172-201ENST00000333254 AXDND1Q5T1B0 1012 aaPredicted RBP12.48□□□□□ -0.41
CCDC172-201ENST00000333254 C11orf57Q6ZUT1 292 aaPredicted RBP12.48□□□□□ -0.41
CCDC172-201ENST00000333254 CYB5R4Q7L1T6 521 aa12.48□□□□□ -0.41
CCDC172-201ENST00000333254 WWC3Q9ULE0 1092 aa12.48□□□□□ -0.41
CCDC172-201ENST00000333254 MORC2Q9Y6X9 1032 aaPredicted RBP12.48□□□□□ -0.41
CCDC172-201ENST00000333254 LAMB1P07942 1786 aa12.48□□□□□ -0.41
CCDC172-201ENST00000333254 SPATA31A1Q5TZJ5 1347 aa12.48□□□□□ -0.41
CCDC172-201ENST00000333254 CACNA1SQ13698 1873 aa12.48□□□□□ -0.41
CCDC172-201ENST00000333254 KDM4FA0A1W2PPD8 638 aa12.48□□□□□ -0.41
CCDC172-201ENST00000333254 ZBTB43O43298 467 aa12.48□□□□□ -0.41
CCDC172-201ENST00000333254 CAMTA2O94983 1202 aa12.48□□□□□ -0.41
CCDC172-201ENST00000333254 PTGS1P23219 599 aa12.48□□□□□ -0.41
CCDC172-201ENST00000333254 U2AF2P26368 475 aaKnown RBP eCLIP12.48□□□□□ -0.41
CCDC172-201ENST00000333254 GUCY1B3Q02153 619 aa12.48□□□□□ -0.41
CCDC172-201ENST00000333254 SF3A1Q15459 793 aaKnown RBP12.48□□□□□ -0.41
CCDC172-201ENST00000333254 TMED8Q6PL24 325 aaPredicted RBP12.48□□□□□ -0.41
CCDC172-201ENST00000333254 CCDC186Q7Z3E2 898 aa12.48□□□□□ -0.41
CCDC172-201ENST00000333254 DHX40Q8IX18 779 aaKnown RBP12.48□□□□□ -0.41
CCDC172-201ENST00000333254 IFNL3Q8IZI9 196 aa12.48□□□□□ -0.41
CCDC172-201ENST00000333254 SPC24Q8NBT2 197 aa12.48□□□□□ -0.41
CCDC172-201ENST00000333254 STAG1Q8WVM7 1258 aa12.48□□□□□ -0.41
CCDC172-201ENST00000333254 WASF1Q92558 559 aa12.48□□□□□ -0.41
CCDC172-201ENST00000333254 LY9Q9HBG7 655 aa12.48□□□□□ -0.41
CCDC172-201ENST00000333254 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.48□□□□□ -0.41
CCDC172-201ENST00000333254 KCND1Q9NSA2 647 aa12.48□□□□□ -0.41
CCDC172-201ENST00000333254 KIAA1468Q9P260 1216 aa12.48□□□□□ -0.41
CCDC172-201ENST00000333254 BECN2A8MW95 431 aa12.47□□□□□ -0.41
CCDC172-201ENST00000333254 NTSR2O95665 410 aa12.47□□□□□ -0.41
CCDC172-201ENST00000333254 CHAF1AQ13111 956 aaPredicted RBP12.47□□□□□ -0.41
CCDC172-201ENST00000333254 RASGRF1Q13972 1273 aa12.47□□□□□ -0.41
CCDC172-201ENST00000333254 PPP2R5BQ15173 497 aa12.47□□□□□ -0.41
CCDC172-201ENST00000333254 SUSD4Q5VX71 490 aa12.47□□□□□ -0.41
CCDC172-201ENST00000333254 TMTC2Q8N394 836 aa12.47□□□□□ -0.41
CCDC172-201ENST00000333254 CDC5LQ99459 802 aaKnown RBP12.47□□□□□ -0.41
CCDC172-201ENST00000333254 MPHOSPH8Q99549 860 aa12.47□□□□□ -0.41
CCDC172-201ENST00000333254 ALG1Q9BT22 464 aa12.47□□□□□ -0.41
CCDC172-201ENST00000333254 NAPBQ9H115 298 aa12.47□□□□□ -0.41
CCDC172-201ENST00000333254 EPB41L4AQ9HCS5 686 aaPredicted RBP12.47□□□□□ -0.41
CCDC172-201ENST00000333254 CLIP2Q9UDT6 1046 aa12.47□□□□□ -0.41
CCDC172-201ENST00000333254 HPSEQ9Y251 543 aa12.47□□□□□ -0.41
CCDC172-201ENST00000333254 CLIC4Q9Y696 253 aa12.47□□□□□ -0.41
CCDC172-201ENST00000333254 ZNF804BA4D1E1 1349 aa12.47□□□□□ -0.41
CCDC172-201ENST00000333254 MYH2Q9UKX2 1941 aa12.46□□□□□ -0.41
CCDC172-201ENST00000333254 KIF28PB7ZC32 967 aa12.46□□□□□ -0.41
CCDC172-201ENST00000333254 MYO1BO43795 1136 aa12.46□□□□□ -0.41
CCDC172-201ENST00000333254 IFNAR1P17181 557 aa12.46□□□□□ -0.41
CCDC172-201ENST00000333254 CRKLP46109 303 aaKnown RBP12.46□□□□□ -0.41
CCDC172-201ENST00000333254 FOSBP53539 338 aa12.46□□□□□ -0.41
CCDC172-201ENST00000333254 C1QBPQ07021 282 aaKnown RBP12.46□□□□□ -0.41
CCDC172-201ENST00000333254 AKNAD1Q5T1N1 836 aa12.46□□□□□ -0.41
CCDC172-201ENST00000333254 KRT40Q6A162 431 aa12.46□□□□□ -0.41
CCDC172-201ENST00000333254 CLEC4GQ6UXB4 293 aa12.46□□□□□ -0.41
CCDC172-201ENST00000333254 SMARCC1Q92922 1105 aaPredicted RBP12.46□□□□□ -0.41
CCDC172-201ENST00000333254 NOL10Q9BSC4 688 aaKnown RBP12.46□□□□□ -0.41
CCDC172-201ENST00000333254 NACAP1Q9BZK3 213 aa12.46□□□□□ -0.41
CCDC172-201ENST00000333254 IMPACTQ9P2X3 320 aa12.46□□□□□ -0.41
CCDC172-201ENST00000333254 CCDC88AQ3V6T2 1871 aa12.46□□□□□ -0.41
CCDC172-201ENST00000333254 DUOX1Q9NRD9 1551 aa12.45□□□□□ -0.42
CCDC172-201ENST00000333254 GSG1L2A8MUP6 293 aa12.45□□□□□ -0.42
CCDC172-201ENST00000333254 B4E1Z4 1266 aa12.45□□□□□ -0.42
CCDC172-201ENST00000333254 IKBKBO14920 756 aa12.45□□□□□ -0.42
CCDC172-201ENST00000333254 FMNL1O95466 1100 aaPredicted RBP12.45□□□□□ -0.42
CCDC172-201ENST00000333254 IGHMBP2P38935 993 aaKnown RBP12.45□□□□□ -0.42
CCDC172-201ENST00000333254 IARSP41252 1262 aaKnown RBP12.45□□□□□ -0.42
CCDC172-201ENST00000333254 NDUFA8P51970 172 aa12.45□□□□□ -0.42
CCDC172-201ENST00000333254 GSDMDP57764 484 aa12.45□□□□□ -0.42
CCDC172-201ENST00000333254 NLRP12P59046 1061 aa12.45□□□□□ -0.42
CCDC172-201ENST00000333254 PTPAQ15257 358 aa12.45□□□□□ -0.42
CCDC172-201ENST00000333254 GLIPR1L2Q4G1C9 344 aa12.45□□□□□ -0.42
CCDC172-201ENST00000333254 BARGINQ6ZT62 677 aa12.45□□□□□ -0.42
CCDC172-201ENST00000333254 VPS37DQ86XT2 251 aa12.45□□□□□ -0.42
CCDC172-201ENST00000333254 DRC7Q8IY82 874 aa12.45□□□□□ -0.42
CCDC172-201ENST00000333254 SDF4Q9BRK5 362 aa12.45□□□□□ -0.42
CCDC172-201ENST00000333254 RNF41Q9H4P4 317 aaPredicted RBP12.45□□□□□ -0.42
CCDC172-201ENST00000333254 FAM217BQ9NTX9 383 aaPredicted RBP12.45□□□□□ -0.42
CCDC172-201ENST00000333254 TUBE1Q9UJT0 475 aa12.45□□□□□ -0.42
CCDC172-201ENST00000333254 ANAPC4Q9UJX5 808 aa12.45□□□□□ -0.42
CCDC172-201ENST00000333254 ZNF652Q9Y2D9 606 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms