RNA–Protein interactions for RNA: ENST00000328392.10

SKP1-201, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-201ENST00000328392 HIF3AQ9Y2N7 669 aa6.55□□□□□ -1.36
SKP1-201ENST00000328392 ACTL7BQ9Y614 415 aa6.55□□□□□ -1.36
SKP1-201ENST00000328392 EIF4EBP3O60516 100 aaPredicted RBP6.54□□□□□ -1.36
SKP1-201ENST00000328392 AOC2O75106 756 aa6.54□□□□□ -1.36
SKP1-201ENST00000328392 TGFB1P01137 390 aa6.54□□□□□ -1.36
SKP1-201ENST00000328392 AP3B2Q13367 1082 aa6.54□□□□□ -1.36
SKP1-201ENST00000328392 DYMQ7RTS9 669 aa6.54□□□□□ -1.36
SKP1-201ENST00000328392 ZDHHC13Q8IUH4 622 aa6.54□□□□□ -1.36
SKP1-201ENST00000328392 WDR18Q9BV38 432 aa6.54□□□□□ -1.36
SKP1-201ENST00000328392 ZFP64Q9NPA5 681 aa6.54□□□□□ -1.36
SKP1-201ENST00000328392 TMEM39AQ9NV64 488 aa6.54□□□□□ -1.36
SKP1-201ENST00000328392 KIAA1522Q9P206 1035 aaPredicted RBP6.54□□□□□ -1.36
SKP1-201ENST00000328392 PPP1R9AQ9ULJ8 1098 aa6.54□□□□□ -1.36
SKP1-201ENST00000328392 ZNF862O60290 1169 aa6.53□□□□□ -1.36
SKP1-201ENST00000328392 FBXO24O75426 580 aa6.53□□□□□ -1.36
SKP1-201ENST00000328392 MED26O95402 600 aa6.53□□□□□ -1.36
SKP1-201ENST00000328392 SSTR4P31391 388 aa6.53□□□□□ -1.36
SKP1-201ENST00000328392 LRP8Q14114 963 aa6.53□□□□□ -1.36
SKP1-201ENST00000328392 NFKBIBQ15653 356 aa6.53□□□□□ -1.36
SKP1-201ENST00000328392 ALG1LQ6GMV1 187 aa6.53□□□□□ -1.36
SKP1-201ENST00000328392 SLC51AQ86UW1 340 aa6.53□□□□□ -1.36
SKP1-201ENST00000328392 SHKBP1Q8TBC3 707 aa6.53□□□□□ -1.36
SKP1-201ENST00000328392 FBF1Q8TES7 1133 aa6.53□□□□□ -1.36
SKP1-201ENST00000328392 MFSD14AQ96MC6 490 aa6.53□□□□□ -1.36
SKP1-201ENST00000328392 DBNDD2Q9BQY9 259 aa6.53□□□□□ -1.36
SKP1-201ENST00000328392 MRS2Q9HD23 443 aa6.53□□□□□ -1.36
SKP1-201ENST00000328392 FAM105AQ9NUU6 356 aa6.53□□□□□ -1.36
SKP1-201ENST00000328392 FAM95CA0A1B0GW59 222 aa6.52□□□□□ -1.37
SKP1-201ENST00000328392 PRR19A6NJB7 356 aa6.52□□□□□ -1.37
SKP1-201ENST00000328392 GSC2O15499 205 aa6.52□□□□□ -1.37
SKP1-201ENST00000328392 PRPF40AO75400 957 aaKnown RBP6.52□□□□□ -1.37
SKP1-201ENST00000328392 GSTP1P09211 210 aaKnown RBP6.52□□□□□ -1.37
SKP1-201ENST00000328392 XRCC5P13010 732 aaKnown RBP6.52□□□□□ -1.37
SKP1-201ENST00000328392 PSMD2Q13200 908 aa6.52□□□□□ -1.37
SKP1-201ENST00000328392 TSNAXIP1Q2TAA8 658 aa6.52□□□□□ -1.37
SKP1-201ENST00000328392 TPTE2Q6XPS3 522 aa6.52□□□□□ -1.37
SKP1-201ENST00000328392 PDZD3Q86UT5 571 aa6.52□□□□□ -1.37
SKP1-201ENST00000328392 FBXL6Q8N531 539 aa6.52□□□□□ -1.37
SKP1-201ENST00000328392 AP4E1Q9UPM8 1137 aa6.52□□□□□ -1.37
SKP1-201ENST00000328392 WDR64B1ANS9 1081 aa6.51□□□□□ -1.37
SKP1-201ENST00000328392 PAGE1O75459 146 aa6.51□□□□□ -1.37
SKP1-201ENST00000328392 NFICP08651 508 aa6.51□□□□□ -1.37
SKP1-201ENST00000328392 RAB6AP20340 208 aa6.51□□□□□ -1.37
SKP1-201ENST00000328392 ADMP35318 185 aa6.51□□□□□ -1.37
SKP1-201ENST00000328392 PPP2R3AQ06190 1150 aa6.51□□□□□ -1.37
SKP1-201ENST00000328392 COL19A1Q14993 1142 aa6.51□□□□□ -1.37
SKP1-201ENST00000328392 MPRIPQ6WCQ1 1025 aa6.51□□□□□ -1.37
SKP1-201ENST00000328392 SULF2Q8IWU5 870 aa6.51□□□□□ -1.37
SKP1-201ENST00000328392 KCNB2Q92953 911 aa6.51□□□□□ -1.37
SKP1-201ENST00000328392 NECAB3Q96P71 396 aaPredicted RBP6.51□□□□□ -1.37
SKP1-201ENST00000328392 ZFYVE1Q9HBF4 777 aa6.51□□□□□ -1.37
SKP1-201ENST00000328392 VTI1BQ9UEU0 232 aa6.51□□□□□ -1.37
SKP1-201ENST00000328392 DYNC1LI2O43237 492 aaPredicted RBP6.5□□□□□ -1.37
SKP1-201ENST00000328392 F13BP05160 661 aa6.5□□□□□ -1.37
SKP1-201ENST00000328392 ARNTP27540 789 aa6.5□□□□□ -1.37
SKP1-201ENST00000328392 GSTT1P30711 240 aa6.5□□□□□ -1.37
SKP1-201ENST00000328392 ASPAP45381 313 aa6.5□□□□□ -1.37
SKP1-201ENST00000328392 HP1BP3Q5SSJ5 553 aaPredicted RBP6.5□□□□□ -1.37
SKP1-201ENST00000328392 GRIN3AQ8TCU5 1115 aa6.5□□□□□ -1.37
SKP1-201ENST00000328392 EZH1Q92800 747 aaPredicted RBP6.5□□□□□ -1.37
SKP1-201ENST00000328392 SEMA6CQ9H3T2 930 aa6.5□□□□□ -1.37
SKP1-201ENST00000328392 GSX1Q9H4S2 264 aaPredicted RBP6.5□□□□□ -1.37
SKP1-201ENST00000328392 C12orf49Q9H741 205 aa6.5□□□□□ -1.37
SKP1-201ENST00000328392 LGR6Q9HBX8 967 aa6.5□□□□□ -1.37
SKP1-201ENST00000328392 ENC1O14682 589 aa6.49□□□□□ -1.37
SKP1-201ENST00000328392 TMPRSS2O15393 492 aa6.49□□□□□ -1.37
SKP1-201ENST00000328392 USP17L7P0C7H9 530 aa6.49□□□□□ -1.37
SKP1-201ENST00000328392 NME2P22392 152 aa6.49□□□□□ -1.37
SKP1-201ENST00000328392 CD97P48960 835 aa6.49□□□□□ -1.37
SKP1-201ENST00000328392 RASIP1Q5U651 963 aa6.49□□□□□ -1.37
SKP1-201ENST00000328392 MAP1SQ66K74 1059 aaPredicted RBP6.49□□□□□ -1.37
SKP1-201ENST00000328392 PAOXQ6QHF9 649 aa6.49□□□□□ -1.37
SKP1-201ENST00000328392 BCL11AQ9H165 835 aa6.49□□□□□ -1.37
SKP1-201ENST00000328392 ACSS3Q9H6R3 686 aa6.49□□□□□ -1.37
SKP1-201ENST00000328392 PRKAG2Q9UGJ0 569 aa6.49□□□□□ -1.37
SKP1-201ENST00000328392 SPG7Q9UQ90 795 aa6.49□□□□□ -1.37
SKP1-201ENST00000328392 PCDHGC5Q9Y5F6 944 aa6.49□□□□□ -1.37
SKP1-201ENST00000328392 GIPC1O14908 333 aa6.48□□□□□ -1.37
SKP1-201ENST00000328392 BMP6P22004 513 aa6.48□□□□□ -1.37
SKP1-201ENST00000328392 HOXA10P31260 410 aaPredicted RBP6.48□□□□□ -1.37
SKP1-201ENST00000328392 ZNF252P-AS1Q0IIN9 211 aa6.48□□□□□ -1.37
SKP1-201ENST00000328392 KIF4BQ2VIQ3 1234 aa6.48□□□□□ -1.37
SKP1-201ENST00000328392 GATA6Q92908 595 aa6.48□□□□□ -1.37
SKP1-201ENST00000328392 SRCIN1Q9C0H9 1055 aa6.48□□□□□ -1.37
SKP1-201ENST00000328392 CBX8Q9HC52 389 aa6.48□□□□□ -1.37
SKP1-201ENST00000328392 PCMTD2Q9NV79 361 aa6.48□□□□□ -1.37
SKP1-201ENST00000328392 CRIM1Q9NZV1 1036 aa6.48□□□□□ -1.37
SKP1-201ENST00000328392 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.47□□□□□ -1.37
SKP1-201ENST00000328392 FAM170BA6NMN3 283 aa6.47□□□□□ -1.37
SKP1-201ENST00000328392 SORBS3O60504 671 aa6.47□□□□□ -1.37
SKP1-201ENST00000328392 COBLO75128 1261 aa6.47□□□□□ -1.37
SKP1-201ENST00000328392 CELA3AP09093 270 aa6.47□□□□□ -1.37
SKP1-201ENST00000328392 GNA15P30679 374 aa6.47□□□□□ -1.37
SKP1-201ENST00000328392 GPBAR1Q8TDU6 330 aa6.47□□□□□ -1.37
SKP1-201ENST00000328392 TBC1D32Q96NH3 1257 aa6.47□□□□□ -1.37
SKP1-201ENST00000328392 FANCD2OSQ96PS1 177 aa6.47□□□□□ -1.37
SKP1-201ENST00000328392 BACH2Q9BYV9 841 aa6.47□□□□□ -1.37
SKP1-201ENST00000328392 DISC1Q9NRI5 854 aa6.47□□□□□ -1.37
SKP1-201ENST00000328392 KRT82Q9NSB4 513 aa6.47□□□□□ -1.37
SKP1-201ENST00000328392 FAM8A1Q9UBU6 413 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms