RNA–Protein interactions for RNA: ENST00000317735.4

RRH-201, Transcript of retinal pigment epithelium-derived rhodopsin homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRH, Length 1,455 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRH-201ENST00000317735 POU4F2Q12837 409 aa8.13□□□□□ -1.11
RRH-201ENST00000317735 CALR3Q96L12 384 aaKnown RBP8.13□□□□□ -1.11
RRH-201ENST00000317735 CHMP4AQ9BY43 222 aa8.13□□□□□ -1.11
RRH-201ENST00000317735 IFT57Q9NWB7 429 aa8.13□□□□□ -1.11
RRH-201ENST00000317735 NOD1Q9Y239 953 aa8.13□□□□□ -1.11
RRH-201ENST00000317735 UBR2Q8IWV8 1755 aa8.13□□□□□ -1.11
RRH-201ENST00000317735 TJP1Q07157 1748 aa8.13□□□□□ -1.11
RRH-201ENST00000317735 GOLGB1Q14789 3259 aaKnown RBP8.13□□□□□ -1.11
RRH-201ENST00000317735 SPATA31C2B4DYI2 1134 aa8.13□□□□□ -1.11
RRH-201ENST00000317735 INHAP05111 366 aa8.13□□□□□ -1.11
RRH-201ENST00000317735 EIF5P55010 431 aaKnown RBP8.13□□□□□ -1.11
RRH-201ENST00000317735 GTF2IP78347 998 aa8.13□□□□□ -1.11
RRH-201ENST00000317735 AIMP1Q12904 312 aaKnown RBP8.13□□□□□ -1.11
RRH-201ENST00000317735 SETDB2Q96T68 719 aa8.13□□□□□ -1.11
RRH-201ENST00000317735 MBIPQ9NS73 344 aa8.13□□□□□ -1.11
RRH-201ENST00000317735 TFIP11Q9UBB9 837 aaKnown RBP8.13□□□□□ -1.11
RRH-201ENST00000317735 UTRNP46939 3433 aa8.12□□□□□ -1.11
RRH-201ENST00000317735 VSIG8P0DPA2 414 aa8.12□□□□□ -1.11
RRH-201ENST00000317735 DUSP27Q5VZP5 1158 aa8.12□□□□□ -1.11
RRH-201ENST00000317735 NBPF10Q6P3W6 841 aaKnown RBP8.12□□□□□ -1.11
RRH-201ENST00000317735 NBPF15Q8N660 670 aa8.12□□□□□ -1.11
RRH-201ENST00000317735 IRF7Q92985 503 aa8.12□□□□□ -1.11
RRH-201ENST00000317735 WWC3Q9ULE0 1092 aa8.12□□□□□ -1.11
RRH-201ENST00000317735 CD2APQ9Y5K6 639 aa8.12□□□□□ -1.11
RRH-201ENST00000317735 PALM3A6NDB9 673 aaPredicted RBP8.11□□□□□ -1.11
RRH-201ENST00000317735 FAM177BA6PVY3 158 aa8.11□□□□□ -1.11
RRH-201ENST00000317735 ITGA6P23229 1130 aa8.11□□□□□ -1.11
RRH-201ENST00000317735 GMPRP36959 345 aa8.11□□□□□ -1.11
RRH-201ENST00000317735 CCDC27Q2M243 656 aa8.11□□□□□ -1.11
RRH-201ENST00000317735 ZSCAN10Q96SZ4 725 aaPredicted RBP8.11□□□□□ -1.11
RRH-201ENST00000317735 PPP1R12CQ9BZL4 782 aa8.11□□□□□ -1.11
RRH-201ENST00000317735 MYH16Q9H6N6 1097 aa8.11□□□□□ -1.11
RRH-201ENST00000317735 KIAA1024Q9UPX6 916 aa8.11□□□□□ -1.11
RRH-201ENST00000317735 MAFBQ9Y5Q3 323 aaPredicted RBP8.11□□□□□ -1.11
RRH-201ENST00000317735 SERPINB2P05120 415 aa8.1□□□□□ -1.11
RRH-201ENST00000317735 CLDN10P78369 228 aa8.1□□□□□ -1.11
RRH-201ENST00000317735 NFIXQ14938 502 aa8.1□□□□□ -1.11
RRH-201ENST00000317735 KRT24Q2M2I5 525 aa8.1□□□□□ -1.11
RRH-201ENST00000317735 NBPF5PQ86XG9 351 aaPredicted RBP8.1□□□□□ -1.11
RRH-201ENST00000317735 WDR63Q8IWG1 891 aa8.1□□□□□ -1.11
RRH-201ENST00000317735 TSR2Q969E8 191 aaKnown RBP8.1□□□□□ -1.11
RRH-201ENST00000317735 STK31Q9BXU1 1019 aa8.1□□□□□ -1.11
RRH-201ENST00000317735 CUEDC1Q9NWM3 386 aaPredicted RBP8.1□□□□□ -1.11
RRH-201ENST00000317735 NIP7Q9Y221 180 aaKnown RBP eCLIP8.1□□□□□ -1.11
RRH-201ENST00000317735 KDM3BQ7LBC6 1761 aa8.1□□□□□ -1.11
RRH-201ENST00000317735 ZBTB7BO15156 539 aaPredicted RBP8.09□□□□□ -1.11
RRH-201ENST00000317735 WIPF1O43516 503 aa8.09□□□□□ -1.11
RRH-201ENST00000317735 ANXA1P04083 346 aa8.09□□□□□ -1.11
RRH-201ENST00000317735 ST5P78524 1137 aa8.09□□□□□ -1.11
RRH-201ENST00000317735 TLR1Q15399 786 aa8.09□□□□□ -1.11
RRH-201ENST00000317735 CCDC30Q5VVM6 783 aa8.09□□□□□ -1.11
RRH-201ENST00000317735 TBC1D9BQ66K14 1250 aa8.09□□□□□ -1.11
RRH-201ENST00000317735 CLEC4GQ6UXB4 293 aa8.09□□□□□ -1.11
RRH-201ENST00000317735 TAS1R3Q7RTX0 852 aa8.09□□□□□ -1.11
RRH-201ENST00000317735 GPR161Q8N6U8 529 aaKnown RBP8.09□□□□□ -1.11
RRH-201ENST00000317735 NLGN2Q8NFZ4 835 aa8.09□□□□□ -1.11
RRH-201ENST00000317735 DBF4Q9UBU7 674 aaPredicted RBP8.09□□□□□ -1.11
RRH-201ENST00000317735 MKRN1Q9UHC7 482 aaKnown RBP8.09□□□□□ -1.11
RRH-201ENST00000317735 SERTAD1Q9UHV2 236 aa8.09□□□□□ -1.11
RRH-201ENST00000317735 C4AP0C0L4 1744 aa8.09□□□□□ -1.11
RRH-201ENST00000317735 IL16Q14005 1332 aa8.08□□□□□ -1.12
RRH-201ENST00000317735 A0A0G2JLW4 131 aa8.08□□□□□ -1.12
RRH-201ENST00000317735 CAMTA2O94983 1202 aa8.08□□□□□ -1.12
RRH-201ENST00000317735 HOXB7P09629 217 aa8.08□□□□□ -1.12
RRH-201ENST00000317735 GPTP24298 496 aa8.08□□□□□ -1.12
RRH-201ENST00000317735 TM4SF1P30408 202 aa8.08□□□□□ -1.12
RRH-201ENST00000317735 TGFB2P61812 414 aa8.08□□□□□ -1.12
RRH-201ENST00000317735 TWISTNBQ3B726 338 aaPredicted RBP8.08□□□□□ -1.12
RRH-201ENST00000317735 TPTE2Q6XPS3 522 aa8.08□□□□□ -1.12
RRH-201ENST00000317735 COPS6Q7L5N1 327 aa8.08□□□□□ -1.12
RRH-201ENST00000317735 CNBD1Q8NA66 436 aa8.08□□□□□ -1.12
RRH-201ENST00000317735 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.08□□□□□ -1.12
RRH-201ENST00000317735 XAGE3Q8WTP9 111 aa8.08□□□□□ -1.12
RRH-201ENST00000317735 NANOS1Q8WY41 292 aaKnown RBP8.08□□□□□ -1.12
RRH-201ENST00000317735 DDX21Q9NR30 783 aaKnown RBP eCLIP8.08□□□□□ -1.12
RRH-201ENST00000317735 HYPKQ9NX55 129 aa8.08□□□□□ -1.12
RRH-201ENST00000317735 CHPF2Q9P2E5 772 aa8.08□□□□□ -1.12
RRH-201ENST00000317735 CICQ96RK0 1608 aaPredicted RBP8.08□□□□□ -1.12
RRH-201ENST00000317735 MAP3K15Q6ZN16 1313 aa8.08□□□□□ -1.12
RRH-201ENST00000317735 ERVV-1B6SEH8 477 aa8.07□□□□□ -1.12
RRH-201ENST00000317735 H0YIN7 160 aa8.07□□□□□ -1.12
RRH-201ENST00000317735 POLRMTO00411 1230 aaKnown RBP8.07□□□□□ -1.12
RRH-201ENST00000317735 GRIN3BO60391 1043 aa8.07□□□□□ -1.12
RRH-201ENST00000317735 DDX58O95786 925 aaKnown RBP8.07□□□□□ -1.12
RRH-201ENST00000317735 ZNF853P0CG23 659 aa8.07□□□□□ -1.12
RRH-201ENST00000317735 PDE6BP35913 854 aa8.07□□□□□ -1.12
RRH-201ENST00000317735 PHKA2P46019 1235 aa8.07□□□□□ -1.12
RRH-201ENST00000317735 SMTNP53814 917 aa8.07□□□□□ -1.12
RRH-201ENST00000317735 DDR1Q08345 913 aa8.07□□□□□ -1.12
RRH-201ENST00000317735 HLFQ16534 295 aa8.07□□□□□ -1.12
RRH-201ENST00000317735 C4orf17Q53FE4 359 aa8.07□□□□□ -1.12
RRH-201ENST00000317735 HSP90AB3PQ58FF7 597 aa8.07□□□□□ -1.12
RRH-201ENST00000317735 WDR44Q5JSH3 913 aa8.07□□□□□ -1.12
RRH-201ENST00000317735 TTLL7Q6ZT98 887 aa8.07□□□□□ -1.12
RRH-201ENST00000317735 TRIM50Q86XT4 487 aa8.07□□□□□ -1.12
RRH-201ENST00000317735 C8orf58Q8NAV2 365 aa8.07□□□□□ -1.12
RRH-201ENST00000317735 ZNF622Q969S3 477 aaKnown RBP eCLIP8.07□□□□□ -1.12
RRH-201ENST00000317735 ZNF358Q9NW07 568 aa8.07□□□□□ -1.12
RRH-201ENST00000317735 BCS1LQ9Y276 419 aa8.07□□□□□ -1.12
RRH-201ENST00000317735 USP3Q9Y6I4 520 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms