RNA–Protein interactions for RNA: ENST00000315616.11

RPUSD2-201, Transcript of RNA pseudouridylate synthase domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPUSD2, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD2-201ENST00000315616 RGL2O15211 777 aa17.26■□□□□ 0.35
RPUSD2-201ENST00000315616 GNPATO15228 680 aa17.26■□□□□ 0.35
RPUSD2-201ENST00000315616 DHX16O60231 1041 aaKnown RBP17.26■□□□□ 0.35
RPUSD2-201ENST00000315616 MIGA1Q8NAN2 632 aa17.26■□□□□ 0.35
RPUSD2-201ENST00000315616 GJD4Q96KN9 370 aaPredicted RBP17.26■□□□□ 0.35
RPUSD2-201ENST00000315616 C4AP0C0L4 1744 aa17.26■□□□□ 0.35
RPUSD2-201ENST00000315616 C4BP0C0L5 1744 aa17.26■□□□□ 0.35
RPUSD2-201ENST00000315616 UBE4AQ14139 1066 aa17.26■□□□□ 0.35
RPUSD2-201ENST00000315616 ZNF772Q68DY9 489 aaPredicted RBP17.26■□□□□ 0.35
RPUSD2-201ENST00000315616 SASS6Q6UVJ0 657 aa17.26■□□□□ 0.35
RPUSD2-201ENST00000315616 CCDC24Q8N4L8 307 aa17.26■□□□□ 0.35
RPUSD2-201ENST00000315616 ZSWIM5Q9P217 1185 aa17.26■□□□□ 0.35
RPUSD2-201ENST00000315616 ORC3Q9UBD5 711 aaPredicted RBP17.26■□□□□ 0.35
RPUSD2-201ENST00000315616 RXRAP19793 462 aa17.25■□□□□ 0.35
RPUSD2-201ENST00000315616 SETDB2Q96T68 719 aa17.25■□□□□ 0.35
RPUSD2-201ENST00000315616 CCDC39Q9UFE4 941 aa17.25■□□□□ 0.35
RPUSD2-201ENST00000315616 CCNL1Q9UK58 526 aaPredicted RBP17.25■□□□□ 0.35
RPUSD2-201ENST00000315616 SLC4A4Q9Y6R1 1079 aa17.25■□□□□ 0.35
RPUSD2-201ENST00000315616 PNPLA7Q6ZV29 1317 aa17.25■□□□□ 0.35
RPUSD2-201ENST00000315616 COL1A1P02452 1464 aaPredicted RBP17.25■□□□□ 0.35
RPUSD2-201ENST00000315616 CHD4Q14839 1912 aa17.25■□□□□ 0.35
RPUSD2-201ENST00000315616 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.25■□□□□ 0.35
RPUSD2-201ENST00000315616 CPLX1O14810 134 aa17.24■□□□□ 0.35
RPUSD2-201ENST00000315616 ONECUT3O60422 494 aaPredicted RBP17.24■□□□□ 0.35
RPUSD2-201ENST00000315616 MAP3K11Q16584 847 aa17.24■□□□□ 0.35
RPUSD2-201ENST00000315616 APOA5Q6Q788 366 aa17.24■□□□□ 0.35
RPUSD2-201ENST00000315616 FBXO18Q8NFZ0 1043 aa17.24■□□□□ 0.35
RPUSD2-201ENST00000315616 BICD2Q8TD16 824 aa17.24■□□□□ 0.35
RPUSD2-201ENST00000315616 FAM84BQ96KN1 310 aaPredicted RBP17.24■□□□□ 0.35
RPUSD2-201ENST00000315616 LY9Q9HBG7 655 aa17.24■□□□□ 0.35
RPUSD2-201ENST00000315616 ABCF2Q9UG63 623 aa17.24■□□□□ 0.35
RPUSD2-201ENST00000315616 USP25Q9UHP3 1055 aa17.24■□□□□ 0.35
RPUSD2-201ENST00000315616 CYP7A1P22680 504 aa17.24■□□□□ 0.35
RPUSD2-201ENST00000315616 CDC27P30260 824 aa17.24■□□□□ 0.35
RPUSD2-201ENST00000315616 CKAP2LQ8IYA6 745 aa17.24■□□□□ 0.35
RPUSD2-201ENST00000315616 ARHGEF1Q92888 912 aaKnown RBP17.24■□□□□ 0.35
RPUSD2-201ENST00000315616 C8orf76Q96K31 380 aa17.24■□□□□ 0.35
RPUSD2-201ENST00000315616 TMEM87BQ96K49 555 aa17.24■□□□□ 0.35
RPUSD2-201ENST00000315616 TNMDQ9H2S6 317 aa17.24■□□□□ 0.35
RPUSD2-201ENST00000315616 KDM4AO75164 1064 aa17.23■□□□□ 0.35
RPUSD2-201ENST00000315616 ZPR1O75312 459 aa17.23■□□□□ 0.35
RPUSD2-201ENST00000315616 KLRK1P26718 216 aa17.23■□□□□ 0.35
RPUSD2-201ENST00000315616 AKNAD1Q5T1N1 836 aa17.23■□□□□ 0.35
RPUSD2-201ENST00000315616 RBM43Q6ZSC3 357 aaKnown RBP17.23■□□□□ 0.35
RPUSD2-201ENST00000315616 NBPF5PQ86XG9 351 aaPredicted RBP17.23■□□□□ 0.35
RPUSD2-201ENST00000315616 CLSTN2Q9H4D0 955 aa17.23■□□□□ 0.35
RPUSD2-201ENST00000315616 DDX19AQ9NUU7 478 aaKnown RBP17.23■□□□□ 0.35
RPUSD2-201ENST00000315616 NHSQ6T4R5 1651 aa17.23■□□□□ 0.35
RPUSD2-201ENST00000315616 CCDC192P0DO97 292 aa17.23■□□□□ 0.35
RPUSD2-201ENST00000315616 GNAT2P19087 354 aa17.23■□□□□ 0.35
RPUSD2-201ENST00000315616 RPS8P62241 208 aaKnown RBP17.23■□□□□ 0.35
RPUSD2-201ENST00000315616 ATL3Q6DD88 541 aa17.23■□□□□ 0.35
RPUSD2-201ENST00000315616 ZNF396Q96N95 335 aaPredicted RBP17.23■□□□□ 0.35
RPUSD2-201ENST00000315616 NLRP3Q96P20 1036 aa17.23■□□□□ 0.35
RPUSD2-201ENST00000315616 NYXQ9GZU5 481 aa17.23■□□□□ 0.35
RPUSD2-201ENST00000315616 QTRT2Q9H974 415 aaKnown RBP17.23■□□□□ 0.35
RPUSD2-201ENST00000315616 RTCBQ9Y3I0 505 aaKnown RBP17.23■□□□□ 0.35
RPUSD2-201ENST00000315616 METAP2P50579 478 aaKnown RBP eCLIP17.22■□□□□ 0.35
RPUSD2-201ENST00000315616 SGMS1Q86VZ5 419 aa17.22■□□□□ 0.35
RPUSD2-201ENST00000315616 AIFM3Q96NN9 605 aa17.22■□□□□ 0.35
RPUSD2-201ENST00000315616 FAM217BQ9NTX9 383 aaPredicted RBP17.22■□□□□ 0.35
RPUSD2-201ENST00000315616 GNL3LQ9NVN8 582 aaKnown RBP17.22■□□□□ 0.35
RPUSD2-201ENST00000315616 MRVI1Q9Y6F6 885 aa17.22■□□□□ 0.35
RPUSD2-201ENST00000315616 COL24A1Q17RW2 1714 aa17.22■□□□□ 0.35
RPUSD2-201ENST00000315616 POLR3DP05423 398 aaPredicted RBP17.22■□□□□ 0.35
RPUSD2-201ENST00000315616 TDO2P48775 406 aa17.22■□□□□ 0.35
RPUSD2-201ENST00000315616 CAVIN4Q5BKX8 364 aa17.22■□□□□ 0.35
RPUSD2-201ENST00000315616 TMEM67Q5HYA8 995 aa17.22■□□□□ 0.35
RPUSD2-201ENST00000315616 CCDC144CPQ8IYA2 1237 aa17.22■□□□□ 0.35
RPUSD2-201ENST00000315616 ZNF384Q8TF68 577 aa17.22■□□□□ 0.35
RPUSD2-201ENST00000315616 MYL10Q9BUA6 226 aa17.22■□□□□ 0.35
RPUSD2-201ENST00000315616 RAI14Q9P0K7 980 aa17.22■□□□□ 0.35
RPUSD2-201ENST00000315616 CACNA1SQ13698 1873 aa17.21■□□□□ 0.35
RPUSD2-201ENST00000315616 TAF1LQ8IZX4 1826 aa17.21■□□□□ 0.35
RPUSD2-201ENST00000315616 AP5Z1O43299 807 aa17.21■□□□□ 0.35
RPUSD2-201ENST00000315616 TM4SF1P30408 202 aa17.21■□□□□ 0.35
RPUSD2-201ENST00000315616 TYRO3Q06418 890 aa17.21■□□□□ 0.35
RPUSD2-201ENST00000315616 UTP14CQ5TAP6 766 aaKnown RBP17.21■□□□□ 0.35
RPUSD2-201ENST00000315616 MFSD6Q6ZSS7 791 aa17.21■□□□□ 0.35
RPUSD2-201ENST00000315616 MICU3Q86XE3 530 aa17.21■□□□□ 0.35
RPUSD2-201ENST00000315616 STK11IPQ8N1F8 1099 aa17.21■□□□□ 0.35
RPUSD2-201ENST00000315616 SDR42E1Q8WUS8 393 aa17.21■□□□□ 0.35
RPUSD2-201ENST00000315616 NACAP1Q9BZK3 213 aa17.21■□□□□ 0.35
RPUSD2-201ENST00000315616 GOLPH3LQ9H4A5 285 aa17.21■□□□□ 0.35
RPUSD2-201ENST00000315616 TIAM2Q8IVF5 1701 aa17.21■□□□□ 0.35
RPUSD2-201ENST00000315616 KIF28PB7ZC32 967 aa17.21■□□□□ 0.34
RPUSD2-201ENST00000315616 SMIM22K7EJ46 135 aa17.21■□□□□ 0.34
RPUSD2-201ENST00000315616 LIFRP42702 1097 aa17.21■□□□□ 0.34
RPUSD2-201ENST00000315616 NTRK3Q16288 839 aa17.21■□□□□ 0.34
RPUSD2-201ENST00000315616 TPTE2Q6XPS3 522 aa17.21■□□□□ 0.34
RPUSD2-201ENST00000315616 FBXO33Q7Z6M2 555 aa17.21■□□□□ 0.34
RPUSD2-201ENST00000315616 CCAR1Q8IX12 1150 aaKnown RBP17.21■□□□□ 0.34
RPUSD2-201ENST00000315616 STAG1Q8WVM7 1258 aa17.21■□□□□ 0.34
RPUSD2-201ENST00000315616 IFIT3O14879 490 aaKnown RBP17.2■□□□□ 0.34
RPUSD2-201ENST00000315616 ZBTB43O43298 467 aa17.2■□□□□ 0.34
RPUSD2-201ENST00000315616 ADCY5O95622 1261 aa17.2■□□□□ 0.34
RPUSD2-201ENST00000315616 VPS37DQ86XT2 251 aa17.2■□□□□ 0.34
RPUSD2-201ENST00000315616 PHKBQ93100 1093 aa17.2■□□□□ 0.34
RPUSD2-201ENST00000315616 RIOK1Q9BRS2 568 aaKnown RBP17.2■□□□□ 0.34
RPUSD2-201ENST00000315616 CNNM2Q9H8M5 875 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms