RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 PPIP5K2O43314 1243 aa15.72■□□□□ 0.11
DDX54-202ENST00000314045 FAM173BQ6P4H8 233 aa15.72■□□□□ 0.11
DDX54-202ENST00000314045 ZSWIM6Q9HCJ5 1215 aa15.72■□□□□ 0.11
DDX54-202ENST00000314045 XDHP47989 1333 aa15.72■□□□□ 0.11
DDX54-202ENST00000314045 BBOX1O75936 387 aa15.72■□□□□ 0.11
DDX54-202ENST00000314045 BRAPQ7Z569 592 aa15.72■□□□□ 0.11
DDX54-202ENST00000314045 USP25Q9UHP3 1055 aa15.72■□□□□ 0.11
DDX54-202ENST00000314045 TRAF1Q13077 416 aa15.71■□□□□ 0.11
DDX54-202ENST00000314045 ME3Q16798 604 aa15.71■□□□□ 0.11
DDX54-202ENST00000314045 ZNF589Q86UQ0 364 aaPredicted RBP15.71■□□□□ 0.11
DDX54-202ENST00000314045 CNKSR1Q969H4 720 aa15.71■□□□□ 0.11
DDX54-202ENST00000314045 RRP36Q96EU6 259 aaKnown RBP15.71■□□□□ 0.11
DDX54-202ENST00000314045 RBM28Q9NW13 759 aaKnown RBP15.71■□□□□ 0.11
DDX54-202ENST00000314045 DOK7Q18PE1 504 aa15.71■□□□□ 0.11
DDX54-202ENST00000314045 ISM2Q6H9L7 571 aa15.71■□□□□ 0.11
DDX54-202ENST00000314045 EHMT1Q9H9B1 1298 aa15.71■□□□□ 0.11
DDX54-202ENST00000314045 C6orf50Q9HD87 102 aa15.71■□□□□ 0.11
DDX54-202ENST00000314045 ZNHIT6Q9NWK9 470 aaKnown RBP15.71■□□□□ 0.11
DDX54-202ENST00000314045 GJA3Q9Y6H8 435 aa15.71■□□□□ 0.11
DDX54-202ENST00000314045 SPATA31A6Q5VVP1 1343 aa15.71■□□□□ 0.1
DDX54-202ENST00000314045 JAK2O60674 1132 aa15.71■□□□□ 0.1
DDX54-202ENST00000314045 PPARAQ07869 468 aa15.71■□□□□ 0.1
DDX54-202ENST00000314045 CALML4Q96GE6 196 aa15.71■□□□□ 0.1
DDX54-202ENST00000314045 COL15A1P39059 1388 aa15.7■□□□□ 0.1
DDX54-202ENST00000314045 ITSN1Q15811 1721 aa15.7■□□□□ 0.1
DDX54-202ENST00000314045 IDEP14735 1019 aa15.7■□□□□ 0.1
DDX54-202ENST00000314045 RBM6P78332 1123 aaKnown RBP15.7■□□□□ 0.1
DDX54-202ENST00000314045 OTUD7BQ6GQQ9 843 aa15.7■□□□□ 0.1
DDX54-202ENST00000314045 V9GY48 417 aaPredicted RBP15.7■□□□□ 0.1
DDX54-202ENST00000314045 SNAP23O00161 211 aa15.7■□□□□ 0.1
DDX54-202ENST00000314045 ADCK5Q3MIX3 580 aa15.7■□□□□ 0.1
DDX54-202ENST00000314045 TFAP4Q01664 338 aa15.7■□□□□ 0.1
DDX54-202ENST00000314045 PARP1P09874 1014 aaKnown RBP15.69■□□□□ 0.1
DDX54-202ENST00000314045 EIF6P56537 245 aaKnown RBP15.69■□□□□ 0.1
DDX54-202ENST00000314045 STX1AQ16623 288 aa15.69■□□□□ 0.1
DDX54-202ENST00000314045 KANK3Q6NY19 840 aa15.69■□□□□ 0.1
DDX54-202ENST00000314045 ARHGEF1Q92888 912 aaKnown RBP15.69■□□□□ 0.1
DDX54-202ENST00000314045 TCP10Q12799 353 aa15.69■□□□□ 0.1
DDX54-202ENST00000314045 NKX1-1Q15270 411 aaPredicted RBP15.69■□□□□ 0.1
DDX54-202ENST00000314045 CYP21A2P08686 494 aa15.69■□□□□ 0.1
DDX54-202ENST00000314045 DEXIO95424 95 aa15.68■□□□□ 0.1
DDX54-202ENST00000314045 KRT2P35908 639 aa15.68■□□□□ 0.1
DDX54-202ENST00000314045 TEKT1Q969V4 418 aa15.68■□□□□ 0.1
DDX54-202ENST00000314045 CDHR2Q9BYE9 1310 aa15.68■□□□□ 0.1
DDX54-202ENST00000314045 SEMA3EO15041 775 aa15.68■□□□□ 0.1
DDX54-202ENST00000314045 TNNI2P48788 182 aa15.68■□□□□ 0.1
DDX54-202ENST00000314045 LRSAM1Q6UWE0 723 aa15.68■□□□□ 0.1
DDX54-202ENST00000314045 PHKBQ93100 1093 aa15.68■□□□□ 0.1
DDX54-202ENST00000314045 PYM1Q9BRP8 204 aaKnown RBP15.68■□□□□ 0.1
DDX54-202ENST00000314045 USP40Q9NVE5 1235 aa15.68■□□□□ 0.1
DDX54-202ENST00000314045 MAP2P11137 1827 aaKnown RBP15.68■□□□□ 0.1
DDX54-202ENST00000314045 ESPNB1AK53 854 aa15.68■□□□□ 0.1
DDX54-202ENST00000314045 MMP10P09238 476 aa15.68■□□□□ 0.1
DDX54-202ENST00000314045 GNA11P29992 359 aa15.68■□□□□ 0.1
DDX54-202ENST00000314045 EIF5P55010 431 aaKnown RBP15.68■□□□□ 0.1
DDX54-202ENST00000314045 OSBP2Q969R2 916 aa15.68■□□□□ 0.1
DDX54-202ENST00000314045 BSDC1Q9NW68 430 aaPredicted RBP15.68■□□□□ 0.1
DDX54-202ENST00000314045 FAM47AQ5JRC9 791 aa15.68■□□□□ 0.1
DDX54-202ENST00000314045 KIAA0825Q8IV33 1275 aa15.68■□□□□ 0.1
DDX54-202ENST00000314045 TPCN1Q9ULQ1 816 aa15.68■□□□□ 0.1
DDX54-202ENST00000314045 SPATA31A5Q5VU36 1347 aa15.67■□□□□ 0.1
DDX54-202ENST00000314045 SPATA31A7Q8IWB4 1347 aa15.67■□□□□ 0.1
DDX54-202ENST00000314045 NIM1KQ8IY84 436 aa15.67■□□□□ 0.1
DDX54-202ENST00000314045 ARPP21Q9UBL0 812 aaPredicted RBP15.67■□□□□ 0.1
DDX54-202ENST00000314045 ATP10DQ9P241 1426 aa15.67■□□□□ 0.1
DDX54-202ENST00000314045 CAVIN2O95810 425 aa15.67■□□□□ 0.1
DDX54-202ENST00000314045 ADD2P35612 726 aa15.67■□□□□ 0.1
DDX54-202ENST00000314045 TBC1D9BQ66K14 1250 aa15.67■□□□□ 0.1
DDX54-202ENST00000314045 CCDC70Q6NSX1 233 aa15.67■□□□□ 0.1
DDX54-202ENST00000314045 AMPD3Q01432 767 aa15.67■□□□□ 0.1
DDX54-202ENST00000314045 RASGRF1Q13972 1273 aa15.67■□□□□ 0.1
DDX54-202ENST00000314045 MNS1Q8NEH6 495 aa15.67■□□□□ 0.1
DDX54-202ENST00000314045 GTF3C6Q969F1 213 aa15.67■□□□□ 0.1
DDX54-202ENST00000314045 GPCPD1Q9NPB8 672 aa15.67■□□□□ 0.1
DDX54-202ENST00000314045 PPEF1O14829 653 aaPredicted RBP15.66■□□□□ 0.1
DDX54-202ENST00000314045 BARGINQ6ZT62 677 aa15.66■□□□□ 0.1
DDX54-202ENST00000314045 TMC4Q7Z404 712 aa15.66■□□□□ 0.1
DDX54-202ENST00000314045 COL3A1P02461 1466 aaPredicted RBP15.66■□□□□ 0.1
DDX54-202ENST00000314045 ADRA2BP18089 450 aa15.66■□□□□ 0.1
DDX54-202ENST00000314045 FOXO4P98177 505 aa15.66■□□□□ 0.1
DDX54-202ENST00000314045 PPP2R5BQ15173 497 aa15.66■□□□□ 0.1
DDX54-202ENST00000314045 ATL3Q6DD88 541 aa15.66■□□□□ 0.1
DDX54-202ENST00000314045 TRMT1LQ7Z2T5 733 aaKnown RBP15.66■□□□□ 0.1
DDX54-202ENST00000314045 ZNF274Q96GC6 653 aaPredicted RBP15.66■□□□□ 0.1
DDX54-202ENST00000314045 A0A0U1RQG5 324 aaPredicted RBP15.66■□□□□ 0.1
DDX54-202ENST00000314045 AFMP43652 599 aa15.66■□□□□ 0.1
DDX54-202ENST00000314045 SCNN1DP51172 638 aa15.66■□□□□ 0.1
DDX54-202ENST00000314045 GRAPQ13588 217 aa15.66■□□□□ 0.1
DDX54-202ENST00000314045 PDIA6Q15084 440 aa15.66■□□□□ 0.1
DDX54-202ENST00000314045 DLGAP5Q15398 846 aa15.66■□□□□ 0.1
DDX54-202ENST00000314045 GRAPLQ8TC17 118 aaPredicted RBP15.66■□□□□ 0.1
DDX54-202ENST00000314045 RABL6Q3YEC7 729 aaPredicted RBP15.66■□□□□ 0.1
DDX54-202ENST00000314045 SMIM5Q71RC9 77 aa15.66■□□□□ 0.1
DDX54-202ENST00000314045 DIS3L2Q8IYB7 885 aaKnown RBP15.66■□□□□ 0.1
DDX54-202ENST00000314045 PUS7LQ9H0K6 701 aaKnown RBP15.65■□□□□ 0.1
DDX54-202ENST00000314045 BCS1LQ9Y276 419 aa15.65■□□□□ 0.1
DDX54-202ENST00000314045 CCP110O43303 1012 aa15.65■□□□□ 0.1
DDX54-202ENST00000314045 TXNRD1Q16881 649 aa15.65■□□□□ 0.1
DDX54-202ENST00000314045 ZNF654Q8IZM8 581 aa15.65■□□□□ 0.1
DDX54-202ENST00000314045 SMARCC2Q8TAQ2 1214 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms