RNA–Protein interactions for RNA: ENST00000304514.11

RGPD3-201, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RGPD3, Length 5,510 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-201ENST00000304514 SGMS1Q86VZ5 419 aa8.42□□□□□ -1.06
RGPD3-201ENST00000304514 FGD1P98174 961 aa8.42□□□□□ -1.06
RGPD3-201ENST00000304514 AXDND1Q5T1B0 1012 aaPredicted RBP8.42□□□□□ -1.06
RGPD3-201ENST00000304514 SPC24Q8NBT2 197 aa8.42□□□□□ -1.06
RGPD3-201ENST00000304514 SPATA31A5Q5VU36 1347 aa8.42□□□□□ -1.06
RGPD3-201ENST00000304514 SPATA31A7Q8IWB4 1347 aa8.42□□□□□ -1.06
RGPD3-201ENST00000304514 GOLGA6L4A6NEF3 574 aa8.42□□□□□ -1.06
RGPD3-201ENST00000304514 YEATS4O95619 227 aa8.42□□□□□ -1.06
RGPD3-201ENST00000304514 NBPF11Q86T75 865 aa8.42□□□□□ -1.06
RGPD3-201ENST00000304514 PRIMPOLQ96LW4 560 aa8.42□□□□□ -1.06
RGPD3-201ENST00000304514 KCND1Q9NSA2 647 aa8.42□□□□□ -1.06
RGPD3-201ENST00000304514 GJB4Q9NTQ9 266 aa8.42□□□□□ -1.06
RGPD3-201ENST00000304514 ANGEL1Q9UNK9 670 aaKnown RBP8.42□□□□□ -1.06
RGPD3-201ENST00000304514 MRPS27Q92552 414 aaKnown RBP8.42□□□□□ -1.06
RGPD3-201ENST00000304514 TBC1D2BQ9UPU7 963 aa8.42□□□□□ -1.06
RGPD3-201ENST00000304514 ZNF646O15015 1829 aaPredicted RBP8.41□□□□□ -1.06
RGPD3-201ENST00000304514 PTPAQ15257 358 aa8.41□□□□□ -1.06
RGPD3-201ENST00000304514 MYSM1Q5VVJ2 828 aa8.41□□□□□ -1.06
RGPD3-201ENST00000304514 ADGRA1Q86SQ6 560 aa8.41□□□□□ -1.06
RGPD3-201ENST00000304514 STAG1Q8WVM7 1258 aa8.41□□□□□ -1.06
RGPD3-201ENST00000304514 UTP14AQ9BVJ6 771 aaKnown RBP8.41□□□□□ -1.06
RGPD3-201ENST00000304514 CDCA7Q9BWT1 371 aaPredicted RBP8.41□□□□□ -1.06
RGPD3-201ENST00000304514 GSG1L2A8MUP6 293 aa8.41□□□□□ -1.06
RGPD3-201ENST00000304514 EXOC5O00471 708 aa8.41□□□□□ -1.06
RGPD3-201ENST00000304514 DHX16O60231 1041 aaKnown RBP8.41□□□□□ -1.06
RGPD3-201ENST00000304514 WDHD1O75717 1129 aaPredicted RBP8.41□□□□□ -1.06
RGPD3-201ENST00000304514 U2AF2P26368 475 aaKnown RBP eCLIP8.41□□□□□ -1.06
RGPD3-201ENST00000304514 IFNL3Q8IZI9 196 aa8.41□□□□□ -1.06
RGPD3-201ENST00000304514 FSIP1Q8NA03 581 aa8.41□□□□□ -1.06
RGPD3-201ENST00000304514 MRFAP1L1Q96HT8 127 aa8.41□□□□□ -1.06
RGPD3-201ENST00000304514 C8orf76Q96K31 380 aa8.41□□□□□ -1.06
RGPD3-201ENST00000304514 INCENPQ9NQS7 918 aa8.41□□□□□ -1.06
RGPD3-201ENST00000304514 SEC31BQ9NQW1 1179 aa8.41□□□□□ -1.06
RGPD3-201ENST00000304514 UBR3Q6ZT12 1888 aa8.41□□□□□ -1.06
RGPD3-201ENST00000304514 ZNF804BA4D1E1 1349 aa8.41□□□□□ -1.06
RGPD3-201ENST00000304514 GOLGA6L6A8MZA4 724 aa8.41□□□□□ -1.06
RGPD3-201ENST00000304514 FMNL1O95466 1100 aaPredicted RBP8.41□□□□□ -1.06
RGPD3-201ENST00000304514 SLC5A1P13866 664 aa8.41□□□□□ -1.06
RGPD3-201ENST00000304514 CTDSPL2Q05D32 466 aa8.41□□□□□ -1.06
RGPD3-201ENST00000304514 KCNG4Q8TDN1 519 aa8.41□□□□□ -1.06
RGPD3-201ENST00000304514 TMEM87BQ96K49 555 aa8.41□□□□□ -1.06
RGPD3-201ENST00000304514 HPSEQ9Y251 543 aa8.41□□□□□ -1.06
RGPD3-201ENST00000304514 ZNF165P49910 485 aa8.41□□□□□ -1.06
RGPD3-201ENST00000304514 APOA5Q6Q788 366 aa8.41□□□□□ -1.06
RGPD3-201ENST00000304514 RAB11FIP4Q86YS3 637 aa8.41□□□□□ -1.06
RGPD3-201ENST00000304514 ZNF710Q8N1W2 664 aa8.41□□□□□ -1.06
RGPD3-201ENST00000304514 MAGEB6Q8N7X4 407 aa8.41□□□□□ -1.06
RGPD3-201ENST00000304514 PPP6R2O75170 966 aa8.4□□□□□ -1.06
RGPD3-201ENST00000304514 BARGINQ6ZT62 677 aa8.4□□□□□ -1.06
RGPD3-201ENST00000304514 MARCH10Q8NA82 808 aaPredicted RBP8.4□□□□□ -1.06
RGPD3-201ENST00000304514 LCORLQ8N3X6 602 aa8.4□□□□□ -1.06
RGPD3-201ENST00000304514 HSD3B7Q9H2F3 369 aa8.4□□□□□ -1.06
RGPD3-201ENST00000304514 B4E1Z4 1266 aa8.4□□□□□ -1.06
RGPD3-201ENST00000304514 METAP2P50579 478 aaKnown RBP eCLIP8.4□□□□□ -1.06
RGPD3-201ENST00000304514 RESP18Q5W5W9 173 aa8.4□□□□□ -1.06
RGPD3-201ENST00000304514 ANO1Q5XXA6 986 aa8.4□□□□□ -1.06
RGPD3-201ENST00000304514 ARMT1Q9H993 441 aa8.4□□□□□ -1.06
RGPD3-201ENST00000304514 ORC3Q9UBD5 711 aaPredicted RBP8.4□□□□□ -1.06
RGPD3-201ENST00000304514 A0A087WWV3 80 aa8.4□□□□□ -1.07
RGPD3-201ENST00000304514 RBM6P78332 1123 aaKnown RBP8.4□□□□□ -1.07
RGPD3-201ENST00000304514 AIFM3Q96NN9 605 aa8.4□□□□□ -1.07
RGPD3-201ENST00000304514 IRS2Q9Y4H2 1338 aa8.4□□□□□ -1.07
RGPD3-201ENST00000304514 CLIP2Q9UDT6 1046 aa8.4□□□□□ -1.07
RGPD3-201ENST00000304514 ANAPC4Q9UJX5 808 aa8.4□□□□□ -1.07
RGPD3-201ENST00000304514 A0A1B0GVL5 298 aa8.39□□□□□ -1.07
RGPD3-201ENST00000304514 UBE2Q2LH0YL09 131 aa8.39□□□□□ -1.07
RGPD3-201ENST00000304514 SPTLC2O15270 562 aa8.39□□□□□ -1.07
RGPD3-201ENST00000304514 MBD4O95243 580 aa8.39□□□□□ -1.07
RGPD3-201ENST00000304514 LIFRP42702 1097 aa8.39□□□□□ -1.07
RGPD3-201ENST00000304514 PARP10Q53GL7 1025 aa8.39□□□□□ -1.07
RGPD3-201ENST00000304514 SHISA4Q96DD7 197 aa8.39□□□□□ -1.07
RGPD3-201ENST00000304514 TIGD1Q96MW7 591 aa8.39□□□□□ -1.07
RGPD3-201ENST00000304514 IDH1O75874 414 aaKnown RBP8.39□□□□□ -1.07
RGPD3-201ENST00000304514 POLR3DP05423 398 aaPredicted RBP8.39□□□□□ -1.07
RGPD3-201ENST00000304514 PFKFB1P16118 471 aa8.39□□□□□ -1.07
RGPD3-201ENST00000304514 CMA1P23946 247 aa8.39□□□□□ -1.07
RGPD3-201ENST00000304514 ATP6V1AP38606 617 aa8.39□□□□□ -1.07
RGPD3-201ENST00000304514 ME1P48163 572 aa8.39□□□□□ -1.07
RGPD3-201ENST00000304514 SLC39A14Q15043 492 aa8.39□□□□□ -1.07
RGPD3-201ENST00000304514 C3orf67Q6ZVT6 689 aa8.39□□□□□ -1.07
RGPD3-201ENST00000304514 RALYLQ86SE5 291 aaKnown RBP8.39□□□□□ -1.07
RGPD3-201ENST00000304514 LRRC8AQ8IWT6 810 aa8.39□□□□□ -1.07
RGPD3-201ENST00000304514 MDM2Q00987 491 aaPredicted RBP8.39□□□□□ -1.07
RGPD3-201ENST00000304514 LRMPQ12912 555 aa8.39□□□□□ -1.07
RGPD3-201ENST00000304514 SHC4Q6S5L8 630 aa8.39□□□□□ -1.07
RGPD3-201ENST00000304514 CCDC73Q6ZRK6 1079 aa8.39□□□□□ -1.07
RGPD3-201ENST00000304514 CCDC186Q7Z3E2 898 aa8.39□□□□□ -1.07
RGPD3-201ENST00000304514 HELBQ8NG08 1087 aaPredicted RBP8.39□□□□□ -1.07
RGPD3-201ENST00000304514 ANO10Q9NW15 660 aa8.39□□□□□ -1.07
RGPD3-201ENST00000304514 NAP1L2Q9ULW6 460 aaPredicted RBP8.39□□□□□ -1.07
RGPD3-201ENST00000304514 CTIFO43310 598 aaKnown RBP8.39□□□□□ -1.07
RGPD3-201ENST00000304514 PRKAB2O43741 272 aa8.39□□□□□ -1.07
RGPD3-201ENST00000304514 NLRP12P59046 1061 aa8.39□□□□□ -1.07
RGPD3-201ENST00000304514 CCZ1BP86790 482 aa8.39□□□□□ -1.07
RGPD3-201ENST00000304514 CCZ1P86791 482 aaPredicted RBP8.39□□□□□ -1.07
RGPD3-201ENST00000304514 CHRNDQ07001 517 aa8.39□□□□□ -1.07
RGPD3-201ENST00000304514 HSP90AA2PQ14568 343 aaPredicted RBP8.39□□□□□ -1.07
RGPD3-201ENST00000304514 ELOA2Q8IYF1 753 aaPredicted RBP8.39□□□□□ -1.07
RGPD3-201ENST00000304514 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.39□□□□□ -1.07
RGPD3-201ENST00000304514 PDCL3Q9H2J4 239 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms