RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 MAPK8IP1Q9UQF2 711 aa16.14■□□□□ 0.17
SDC2-201ENST00000302190 CAVIN2O95810 425 aa16.13■□□□□ 0.17
SDC2-201ENST00000302190 PNOCQ13519 176 aa16.13■□□□□ 0.17
SDC2-201ENST00000302190 CCDC144BQ3MJ40 725 aa16.13■□□□□ 0.17
SDC2-201ENST00000302190 HAUS7Q99871 368 aa16.13■□□□□ 0.17
SDC2-201ENST00000302190 SLC4A4Q9Y6R1 1079 aa16.13■□□□□ 0.17
SDC2-201ENST00000302190 IGHMBP2P38935 993 aaKnown RBP16.13■□□□□ 0.17
SDC2-201ENST00000302190 SMARCE1Q969G3 411 aa16.13■□□□□ 0.17
SDC2-201ENST00000302190 ARMT1Q9H993 441 aa16.13■□□□□ 0.17
SDC2-201ENST00000302190 INCENPQ9NQS7 918 aa16.13■□□□□ 0.17
SDC2-201ENST00000302190 AP5Z1O43299 807 aa16.13■□□□□ 0.17
SDC2-201ENST00000302190 ITGA6P23229 1130 aa16.13■□□□□ 0.17
SDC2-201ENST00000302190 ERCC6LQ2NKX8 1250 aa16.13■□□□□ 0.17
SDC2-201ENST00000302190 MARCH10Q8NA82 808 aaPredicted RBP16.13■□□□□ 0.17
SDC2-201ENST00000302190 OSBP2Q969R2 916 aa16.13■□□□□ 0.17
SDC2-201ENST00000302190 COPRSQ9NQ92 184 aa16.13■□□□□ 0.17
SDC2-201ENST00000302190 IRS4O14654 1257 aaPredicted RBP16.12■□□□□ 0.17
SDC2-201ENST00000302190 EPB41L2O43491 1005 aaKnown RBP16.12■□□□□ 0.17
SDC2-201ENST00000302190 COBLO75128 1261 aa16.12■□□□□ 0.17
SDC2-201ENST00000302190 MBD4O95243 580 aa16.12■□□□□ 0.17
SDC2-201ENST00000302190 IRX3P78415 501 aaPredicted RBP16.12■□□□□ 0.17
SDC2-201ENST00000302190 GPS2Q13227 327 aa16.12■□□□□ 0.17
SDC2-201ENST00000302190 HSP90B2PQ58FF3 399 aa16.12■□□□□ 0.17
SDC2-201ENST00000302190 PLIN2Q99541 437 aa16.12■□□□□ 0.17
SDC2-201ENST00000302190 KCNF1Q9H3M0 494 aa16.12■□□□□ 0.17
SDC2-201ENST00000302190 USP54Q70EL1 1684 aa16.12■□□□□ 0.17
SDC2-201ENST00000302190 CASQ1P31415 396 aa16.12■□□□□ 0.17
SDC2-201ENST00000302190 ATP2B2Q01814 1243 aa16.12■□□□□ 0.17
SDC2-201ENST00000302190 WTAPQ15007 396 aa16.12■□□□□ 0.17
SDC2-201ENST00000302190 LRRC8AQ8IWT6 810 aa16.12■□□□□ 0.17
SDC2-201ENST00000302190 CCDC24Q8N4L8 307 aa16.12■□□□□ 0.17
SDC2-201ENST00000302190 TRIM34Q9BYJ4 488 aa16.12■□□□□ 0.17
SDC2-201ENST00000302190 HELLSQ9NRZ9 838 aa16.12■□□□□ 0.17
SDC2-201ENST00000302190 CERS3Q8IU89 383 aa16.12■□□□□ 0.17
SDC2-201ENST00000302190 CRYBG1Q9Y4K1 1723 aa16.12■□□□□ 0.17
SDC2-201ENST00000302190 FANCCQ00597 558 aa16.11■□□□□ 0.17
SDC2-201ENST00000302190 MYSM1Q5VVJ2 828 aa16.11■□□□□ 0.17
SDC2-201ENST00000302190 CCDC102AQ96A19 550 aa16.11■□□□□ 0.17
SDC2-201ENST00000302190 SPATA31A1Q5TZJ5 1347 aa16.11■□□□□ 0.17
SDC2-201ENST00000302190 USP27XA6NNY8 438 aa16.11■□□□□ 0.17
SDC2-201ENST00000302190 M0R2C6 588 aa16.11■□□□□ 0.17
SDC2-201ENST00000302190 KRT40Q6A162 431 aa16.11■□□□□ 0.17
SDC2-201ENST00000302190 CABP5Q9NP86 173 aa16.11■□□□□ 0.17
SDC2-201ENST00000302190 PUF60Q9UHX1 559 aaKnown RBP16.11■□□□□ 0.17
SDC2-201ENST00000302190 MAST3O60307 1309 aa16.11■□□□□ 0.17
SDC2-201ENST00000302190 PFKFB2O60825 505 aa16.11■□□□□ 0.17
SDC2-201ENST00000302190 MCM6Q14566 821 aa16.11■□□□□ 0.17
SDC2-201ENST00000302190 KRT222Q8N1A0 295 aa16.11■□□□□ 0.17
SDC2-201ENST00000302190 OVOS2A0A0G2JMS6 1433 aa16.1■□□□□ 0.17
SDC2-201ENST00000302190 AFF2P51816 1311 aa16.1■□□□□ 0.17
SDC2-201ENST00000302190 SALL3Q9BXA9 1300 aa16.1■□□□□ 0.17
SDC2-201ENST00000302190 POLR2DO15514 142 aaKnown RBP16.1■□□□□ 0.17
SDC2-201ENST00000302190 CYP7A1P22680 504 aa16.1■□□□□ 0.17
SDC2-201ENST00000302190 RESTQ13127 1097 aa16.1■□□□□ 0.17
SDC2-201ENST00000302190 ENOX2Q16206 610 aaKnown RBP16.1■□□□□ 0.17
SDC2-201ENST00000302190 NOC3LQ8WTT2 800 aaKnown RBP16.1■□□□□ 0.17
SDC2-201ENST00000302190 KIAA1468Q9P260 1216 aa16.1■□□□□ 0.17
SDC2-201ENST00000302190 CCP110O43303 1012 aa16.1■□□□□ 0.17
SDC2-201ENST00000302190 ZSCAN12O43309 604 aa16.1■□□□□ 0.17
SDC2-201ENST00000302190 ZFYP08048 801 aaPredicted RBP16.1■□□□□ 0.17
SDC2-201ENST00000302190 PFKFB1P16118 471 aa16.1■□□□□ 0.17
SDC2-201ENST00000302190 RTN1Q16799 776 aa16.1■□□□□ 0.17
SDC2-201ENST00000302190 STOX1Q6ZVD7 989 aa16.1■□□□□ 0.17
SDC2-201ENST00000302190 EEF2KMTQ96G04 330 aa16.1■□□□□ 0.17
SDC2-201ENST00000302190 COL16A1Q07092 1604 aaPredicted RBP16.1■□□□□ 0.17
SDC2-201ENST00000302190 ZNF710Q8N1W2 664 aa16.1■□□□□ 0.17
SDC2-201ENST00000302190 TMEM87AQ8NBN3 555 aa16.1■□□□□ 0.17
SDC2-201ENST00000302190 FAM208AQ9UK61 1670 aaKnown RBP16.1■□□□□ 0.17
SDC2-201ENST00000302190 SLC5A1P13866 664 aa16.09■□□□□ 0.17
SDC2-201ENST00000302190 NAA16Q6N069 864 aaPredicted RBP16.09■□□□□ 0.17
SDC2-201ENST00000302190 CCDC150Q8NCX0 1101 aa16.09■□□□□ 0.17
SDC2-201ENST00000302190 APPBP2Q92624 585 aa16.09■□□□□ 0.17
SDC2-201ENST00000302190 NUP88Q99567 741 aaPredicted RBP16.09■□□□□ 0.17
SDC2-201ENST00000302190 CARD6Q9BX69 1037 aa16.09■□□□□ 0.17
SDC2-201ENST00000302190 PUS7LQ9H0K6 701 aaKnown RBP16.09■□□□□ 0.17
SDC2-201ENST00000302190 ANGEL1Q9UNK9 670 aaKnown RBP16.09■□□□□ 0.17
SDC2-201ENST00000302190 ABCA3Q99758 1704 aa16.09■□□□□ 0.17
SDC2-201ENST00000302190 SSBP05455 408 aaKnown RBP eCLIP16.09■□□□□ 0.17
SDC2-201ENST00000302190 ATP1A3P13637 1013 aa16.09■□□□□ 0.17
SDC2-201ENST00000302190 ADKP55263 362 aaKnown RBP16.09■□□□□ 0.17
SDC2-201ENST00000302190 DESI2Q9BSY9 194 aa16.09■□□□□ 0.17
SDC2-201ENST00000302190 GOLPH3LQ9H4A5 285 aa16.09■□□□□ 0.17
SDC2-201ENST00000302190 KIF2AO00139 706 aaPredicted RBP16.09■□□□□ 0.17
SDC2-201ENST00000302190 PHACTR2O75167 634 aa16.09■□□□□ 0.17
SDC2-201ENST00000302190 VAT1LQ9HCJ6 419 aa16.09■□□□□ 0.17
SDC2-201ENST00000302190 DACH1Q9UI36 760 aa16.09■□□□□ 0.17
SDC2-201ENST00000302190 ZNF532Q9HCE3 1301 aa16.08■□□□□ 0.17
SDC2-201ENST00000302190 G3V3G9 751 aa16.08■□□□□ 0.17
SDC2-201ENST00000302190 NLRP5P59047 1200 aa16.08■□□□□ 0.17
SDC2-201ENST00000302190 LONRF3Q496Y0 759 aa16.08■□□□□ 0.17
SDC2-201ENST00000302190 DCAF8Q5TAQ9 597 aa16.08■□□□□ 0.17
SDC2-201ENST00000302190 LLPHQ9BRT6 129 aaKnown RBP16.08■□□□□ 0.17
SDC2-201ENST00000302190 ZHX3Q9H4I2 956 aa16.08■□□□□ 0.17
SDC2-201ENST00000302190 KCNH3Q9ULD8 1083 aa16.08■□□□□ 0.17
SDC2-201ENST00000302190 CCT6AP40227 531 aaKnown RBP16.08■□□□□ 0.16
SDC2-201ENST00000302190 DIS3L2Q8IYB7 885 aaKnown RBP16.08■□□□□ 0.16
SDC2-201ENST00000302190 WASF1Q92558 559 aa16.08■□□□□ 0.16
SDC2-201ENST00000302190 KAZALD1Q96I82 304 aa16.08■□□□□ 0.16
SDC2-201ENST00000302190 TIGD1Q96MW7 591 aa16.08■□□□□ 0.16
SDC2-201ENST00000302190 NOL10Q9BSC4 688 aaKnown RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms