RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 POTEJP0CG39 1038 aa27.29■■□□□ 1.96
LINC01116-201ENST00000295549 SPDYE2Q495Y8 402 aa27.29■■□□□ 1.96
LINC01116-201ENST00000295549 BMP2KLQ5H9B9 411 aa27.29■■□□□ 1.96
LINC01116-201ENST00000295549 RFX7Q2KHR2 1363 aa27.29■■□□□ 1.96
LINC01116-201ENST00000295549 MAST2Q6P0Q8 1798 aa27.28■■□□□ 1.96
LINC01116-201ENST00000295549 CERS3Q8IU89 383 aa27.28■■□□□ 1.96
LINC01116-201ENST00000295549 NOL10Q9BSC4 688 aaKnown RBP27.28■■□□□ 1.96
LINC01116-201ENST00000295549 TDRD3Q9H7E2 651 aaKnown RBP27.28■■□□□ 1.96
LINC01116-201ENST00000295549 PITPNM2Q9BZ72 1349 aa27.28■■□□□ 1.96
LINC01116-201ENST00000295549 CHGBP05060 677 aa27.27■■□□□ 1.96
LINC01116-201ENST00000295549 CDC42EP5Q6NZY7 148 aa27.27■■□□□ 1.96
LINC01116-201ENST00000295549 ZNF70Q9UC06 446 aaPredicted RBP27.27■■□□□ 1.96
LINC01116-201ENST00000295549 CLEC11AQ9Y240 323 aa27.27■■□□□ 1.96
LINC01116-201ENST00000295549 ASTN2O75129 1339 aaPredicted RBP27.27■■□□□ 1.96
LINC01116-201ENST00000295549 MYH2Q9UKX2 1941 aa27.27■■□□□ 1.96
LINC01116-201ENST00000295549 PLCG2P16885 1265 aa27.26■■□□□ 1.95
LINC01116-201ENST00000295549 SLFNL1Q499Z3 407 aa27.26■■□□□ 1.95
LINC01116-201ENST00000295549 ANGEL2Q5VTE6 544 aaKnown RBP27.26■■□□□ 1.95
LINC01116-201ENST00000295549 USP40Q9NVE5 1235 aa27.26■■□□□ 1.95
LINC01116-201ENST00000295549 AATFQ9NY61 560 aaKnown RBP eCLIP27.26■■□□□ 1.95
LINC01116-201ENST00000295549 GGA3Q9NZ52 723 aa27.26■■□□□ 1.95
LINC01116-201ENST00000295549 RHBDL3P58872 404 aa27.25■■□□□ 1.95
LINC01116-201ENST00000295549 MIGA1Q8NAN2 632 aa27.25■■□□□ 1.95
LINC01116-201ENST00000295549 APPBP2Q92624 585 aa27.25■■□□□ 1.95
LINC01116-201ENST00000295549 DCPSQ96C86 337 aaKnown RBP27.25■■□□□ 1.95
LINC01116-201ENST00000295549 ADAMTSL1Q8N6G6 1762 aa27.25■■□□□ 1.95
LINC01116-201ENST00000295549 CLRN2A0PK11 232 aa27.24■■□□□ 1.95
LINC01116-201ENST00000295549 FKBP1CQ5VVH2 108 aa27.24■■□□□ 1.95
LINC01116-201ENST00000295549 RIOK1Q9BRS2 568 aaKnown RBP27.24■■□□□ 1.95
LINC01116-201ENST00000295549 ZMYM1Q5SVZ6 1142 aa27.24■■□□□ 1.95
LINC01116-201ENST00000295549 OSBP2Q969R2 916 aa27.24■■□□□ 1.95
LINC01116-201ENST00000295549 PUS7LQ9H0K6 701 aaKnown RBP27.24■■□□□ 1.95
LINC01116-201ENST00000295549 TMOD2Q9NZR1 351 aa27.24■■□□□ 1.95
LINC01116-201ENST00000295549 MAGEB6P1A0A0J9YX57 407 aa27.23■■□□□ 1.95
LINC01116-201ENST00000295549 HIP1O00291 1037 aa27.23■■□□□ 1.95
LINC01116-201ENST00000295549 TOMM70O94826 608 aa27.23■■□□□ 1.95
LINC01116-201ENST00000295549 APOBEC3FQ8IUX4 373 aaKnown RBP27.23■■□□□ 1.95
LINC01116-201ENST00000295549 DYNLL1P63167 89 aaKnown RBP27.22■■□□□ 1.95
LINC01116-201ENST00000295549 CHADLQ6NUI6 762 aa27.22■■□□□ 1.95
LINC01116-201ENST00000295549 IDI2Q9BXS1 227 aa27.22■■□□□ 1.95
LINC01116-201ENST00000295549 VEZTQ9HBM0 779 aa27.22■■□□□ 1.95
LINC01116-201ENST00000295549 WDHD1O75717 1129 aaPredicted RBP27.21■■□□□ 1.95
LINC01116-201ENST00000295549 TNFAIP1Q13829 316 aa27.21■■□□□ 1.95
LINC01116-201ENST00000295549 RBM46Q8TBY0 533 aaKnown RBP27.21■■□□□ 1.95
LINC01116-201ENST00000295549 SH3RF3Q8TEJ3 882 aaPredicted RBP27.21■■□□□ 1.95
LINC01116-201ENST00000295549 AIDAQ96BJ3 306 aa27.21■■□□□ 1.95
LINC01116-201ENST00000295549 NPM3O75607 178 aaKnown RBP27.2■■□□□ 1.94
LINC01116-201ENST00000295549 MAP1SQ66K74 1059 aaPredicted RBP27.2■■□□□ 1.94
LINC01116-201ENST00000295549 CDC37L1Q7L3B6 337 aa27.2■■□□□ 1.94
LINC01116-201ENST00000295549 KRT26Q7Z3Y9 468 aa27.2■■□□□ 1.94
LINC01116-201ENST00000295549 SULF1Q8IWU6 871 aa27.2■■□□□ 1.94
LINC01116-201ENST00000295549 HELLSQ9NRZ9 838 aa27.2■■□□□ 1.94
LINC01116-201ENST00000295549 MBD4O95243 580 aa27.19■■□□□ 1.94
LINC01116-201ENST00000295549 CACNB3P54284 484 aa27.19■■□□□ 1.94
LINC01116-201ENST00000295549 FAM83AQ86UY5 434 aa27.19■■□□□ 1.94
LINC01116-201ENST00000295549 TEX11Q8IYF3 940 aa27.19■■□□□ 1.94
LINC01116-201ENST00000295549 LCORLQ8N3X6 602 aa27.19■■□□□ 1.94
LINC01116-201ENST00000295549 SMC1BQ8NDV3 1235 aa27.19■■□□□ 1.94
LINC01116-201ENST00000295549 MYH7P12883 1935 aa27.19■■□□□ 1.94
LINC01116-201ENST00000295549 NFIAQ12857 509 aa27.18■■□□□ 1.94
LINC01116-201ENST00000295549 FAM227BQ96M60 508 aa27.18■■□□□ 1.94
LINC01116-201ENST00000295549 DEFB129Q9H1M3 183 aa27.18■■□□□ 1.94
LINC01116-201ENST00000295549 ARMT1Q9H993 441 aa27.18■■□□□ 1.94
LINC01116-201ENST00000295549 DIAPH3Q9NSV4 1193 aa27.18■■□□□ 1.94
LINC01116-201ENST00000295549 TCP10L2B9ZVM9 353 aa27.17■■□□□ 1.94
LINC01116-201ENST00000295549 TNNI2P48788 182 aa27.17■■□□□ 1.94
LINC01116-201ENST00000295549 NMIQ13287 307 aaPredicted RBP27.17■■□□□ 1.94
LINC01116-201ENST00000295549 STRBPQ96SI9 672 aaKnown RBP27.17■■□□□ 1.94
LINC01116-201ENST00000295549 SEC62Q99442 399 aaKnown RBP27.17■■□□□ 1.94
LINC01116-201ENST00000295549 CRNKL1Q9BZJ0 848 aaKnown RBP27.17■■□□□ 1.94
LINC01116-201ENST00000295549 FAM198AQ9UFP1 575 aa27.17■■□□□ 1.94
LINC01116-201ENST00000295549 PPP2R3BQ9Y5P8 575 aa27.17■■□□□ 1.94
LINC01116-201ENST00000295549 A0A0D9SFI3 127 aa27.16■■□□□ 1.94
LINC01116-201ENST00000295549 M0R2C6 588 aa27.16■■□□□ 1.94
LINC01116-201ENST00000295549 CHMLP26374 656 aa27.16■■□□□ 1.94
LINC01116-201ENST00000295549 MCMDC2Q4G0Z9 681 aa27.16■■□□□ 1.94
LINC01116-201ENST00000295549 USP48Q86UV5 1035 aa27.16■■□□□ 1.94
LINC01116-201ENST00000295549 GPAA1O43292 621 aa27.16■■□□□ 1.94
LINC01116-201ENST00000295549 ENTPD3O75355 529 aa27.16■■□□□ 1.94
LINC01116-201ENST00000295549 RASA3Q14644 834 aa27.16■■□□□ 1.94
LINC01116-201ENST00000295549 TGFBRAP1Q8WUH2 860 aa27.16■■□□□ 1.94
LINC01116-201ENST00000295549 GLIS2Q9BZE0 524 aaPredicted RBP27.16■■□□□ 1.94
LINC01116-201ENST00000295549 SCAF8Q9UPN6 1271 aaKnown RBP27.16■■□□□ 1.94
LINC01116-201ENST00000295549 CNTNAP1P78357 1384 aa27.15■■□□□ 1.94
LINC01116-201ENST00000295549 ECM29Q5VYK3 1845 aa27.15■■□□□ 1.94
LINC01116-201ENST00000295549 ITGBL1O95965 494 aaPredicted RBP27.15■■□□□ 1.94
LINC01116-201ENST00000295549 FSTL1Q12841 308 aa27.15■■□□□ 1.94
LINC01116-201ENST00000295549 CWC27Q6UX04 472 aaKnown RBP27.15■■□□□ 1.94
LINC01116-201ENST00000295549 FAM151AQ8WW52 585 aa27.15■■□□□ 1.94
LINC01116-201ENST00000295549 DDX4Q9NQI0 724 aaKnown RBP27.15■■□□□ 1.94
LINC01116-201ENST00000295549 ADM5C9JUS6 153 aa27.14■■□□□ 1.93
LINC01116-201ENST00000295549 GNAT2P19087 354 aa27.14■■□□□ 1.93
LINC01116-201ENST00000295549 PICALMQ13492 652 aa27.13■■□□□ 1.93
LINC01116-201ENST00000295549 MKRN1Q9UHC7 482 aaKnown RBP27.13■■□□□ 1.93
LINC01116-201ENST00000295549 FLT1P17948 1338 aa27.12■■□□□ 1.93
LINC01116-201ENST00000295549 USP5P45974 858 aa27.12■■□□□ 1.93
LINC01116-201ENST00000295549 TCP10Q12799 353 aa27.12■■□□□ 1.93
LINC01116-201ENST00000295549 RUFY2Q8WXA3 655 aa27.12■■□□□ 1.93
LINC01116-201ENST00000295549 TMEM39BQ9GZU3 492 aa27.12■■□□□ 1.93
LINC01116-201ENST00000295549 ATP8A2Q9NTI2 1148 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms