RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 ANAPC4Q9UJX5 808 aa10.78□□□□□ -0.68
PDPN-201ENST00000294489 IQSEC3Q9UPP2 1182 aaPredicted RBP10.78□□□□□ -0.68
PDPN-201ENST00000294489 BAZ2AQ9UIF9 1905 aaKnown RBP10.78□□□□□ -0.68
PDPN-201ENST00000294489 APPP05067 770 aa10.78□□□□□ -0.68
PDPN-201ENST00000294489 CYP7A1P22680 504 aa10.78□□□□□ -0.68
PDPN-201ENST00000294489 WDR66Q8TBY9 1149 aa10.78□□□□□ -0.68
PDPN-201ENST00000294489 GRPEL1Q9HAV7 217 aa10.78□□□□□ -0.68
PDPN-201ENST00000294489 C10orf71Q711Q0 1435 aa10.78□□□□□ -0.68
PDPN-201ENST00000294489 NAV1Q8NEY1 1877 aa10.78□□□□□ -0.68
PDPN-201ENST00000294489 PFKFB2O60825 505 aa10.78□□□□□ -0.68
PDPN-201ENST00000294489 ANTXR2P58335 489 aa10.78□□□□□ -0.68
PDPN-201ENST00000294489 HAND2P61296 217 aa10.78□□□□□ -0.68
PDPN-201ENST00000294489 MECOMQ03112 1051 aa10.78□□□□□ -0.68
PDPN-201ENST00000294489 SPTY2D1Q68D10 685 aaPredicted RBP10.78□□□□□ -0.68
PDPN-201ENST00000294489 RALYLQ86SE5 291 aaKnown RBP10.78□□□□□ -0.68
PDPN-201ENST00000294489 TBC1D10CQ8IV04 446 aa10.78□□□□□ -0.68
PDPN-201ENST00000294489 LLPHQ9BRT6 129 aaKnown RBP10.78□□□□□ -0.68
PDPN-201ENST00000294489 PSME4Q14997 1843 aa10.77□□□□□ -0.68
PDPN-201ENST00000294489 MYH15Q9Y2K3 1946 aa10.77□□□□□ -0.69
PDPN-201ENST00000294489 MAGEB6P1A0A0J9YX57 407 aa10.77□□□□□ -0.69
PDPN-201ENST00000294489 XRCC6P12956 609 aaKnown RBP eCLIP10.77□□□□□ -0.69
PDPN-201ENST00000294489 TRDNQ13061 729 aa10.77□□□□□ -0.69
PDPN-201ENST00000294489 USP48Q86UV5 1035 aa10.77□□□□□ -0.69
PDPN-201ENST00000294489 TMEM87AQ8NBN3 555 aa10.77□□□□□ -0.69
PDPN-201ENST00000294489 NCOA7Q8NI08 942 aa10.77□□□□□ -0.69
PDPN-201ENST00000294489 SYAP1Q96A49 352 aaPredicted RBP10.77□□□□□ -0.69
PDPN-201ENST00000294489 ZNF274Q96GC6 653 aaPredicted RBP10.77□□□□□ -0.69
PDPN-201ENST00000294489 FAM205AQ6ZU69 1335 aa10.77□□□□□ -0.69
PDPN-201ENST00000294489 MCM5P33992 734 aa10.77□□□□□ -0.69
PDPN-201ENST00000294489 ZNF445P59923 1031 aa10.77□□□□□ -0.69
PDPN-201ENST00000294489 ZSCAN23Q3MJ62 389 aa10.77□□□□□ -0.69
PDPN-201ENST00000294489 NAA16Q6N069 864 aaPredicted RBP10.77□□□□□ -0.69
PDPN-201ENST00000294489 STAG1Q8WVM7 1258 aa10.77□□□□□ -0.69
PDPN-201ENST00000294489 CD209Q9NNX6 404 aa10.77□□□□□ -0.69
PDPN-201ENST00000294489 RAI14Q9P0K7 980 aa10.77□□□□□ -0.69
PDPN-201ENST00000294489 KIF3AQ9Y496 699 aa10.77□□□□□ -0.69
PDPN-201ENST00000294489 TACC3Q9Y6A5 838 aa10.77□□□□□ -0.69
PDPN-201ENST00000294489 UFL1O94874 794 aa10.76□□□□□ -0.69
PDPN-201ENST00000294489 FGRP09769 529 aa10.76□□□□□ -0.69
PDPN-201ENST00000294489 APOBRQ0VD83 1088 aa10.76□□□□□ -0.69
PDPN-201ENST00000294489 FAM184AQ8NB25 1140 aa10.76□□□□□ -0.69
PDPN-201ENST00000294489 MTA3Q9BTC8 594 aa10.76□□□□□ -0.69
PDPN-201ENST00000294489 GDPD2Q9HCC8 539 aa10.76□□□□□ -0.69
PDPN-201ENST00000294489 ABCF2Q9UG63 623 aa10.76□□□□□ -0.69
PDPN-201ENST00000294489 ECM29Q5VYK3 1845 aa10.76□□□□□ -0.69
PDPN-201ENST00000294489 PRKAB2O43741 272 aa10.76□□□□□ -0.69
PDPN-201ENST00000294489 BAG6P46379 1132 aa10.76□□□□□ -0.69
PDPN-201ENST00000294489 SCRN1Q12765 414 aa10.76□□□□□ -0.69
PDPN-201ENST00000294489 NAP1L2Q9ULW6 460 aaPredicted RBP10.76□□□□□ -0.69
PDPN-201ENST00000294489 CNPY2Q9Y2B0 182 aa10.76□□□□□ -0.69
PDPN-201ENST00000294489 SLC4A4Q9Y6R1 1079 aa10.76□□□□□ -0.69
PDPN-201ENST00000294489 NID2Q14112 1375 aa10.76□□□□□ -0.69
PDPN-201ENST00000294489 DTNBO60941 627 aa10.75□□□□□ -0.69
PDPN-201ENST00000294489 HMGN5P82970 282 aaKnown RBP10.75□□□□□ -0.69
PDPN-201ENST00000294489 GAS2L3Q86XJ1 694 aa10.75□□□□□ -0.69
PDPN-201ENST00000294489 SMARCC2Q8TAQ2 1214 aa10.75□□□□□ -0.69
PDPN-201ENST00000294489 BRPF3Q9ULD4 1205 aa10.75□□□□□ -0.69
PDPN-201ENST00000294489 NSFL1CQ9UNZ2 370 aaKnown RBP10.75□□□□□ -0.69
PDPN-201ENST00000294489 PRDX5P30044 214 aa10.75□□□□□ -0.69
PDPN-201ENST00000294489 CHST3Q7LGC8 479 aa10.75□□□□□ -0.69
PDPN-201ENST00000294489 CCDC125Q86Z20 511 aa10.75□□□□□ -0.69
PDPN-201ENST00000294489 NACAP1Q9BZK3 213 aa10.75□□□□□ -0.69
PDPN-201ENST00000294489 FIBPO43427 364 aa10.75□□□□□ -0.69
PDPN-201ENST00000294489 PRC1O43663 620 aa10.75□□□□□ -0.69
PDPN-201ENST00000294489 PPP4CP60510 307 aa10.75□□□□□ -0.69
PDPN-201ENST00000294489 DNM1Q05193 864 aaKnown RBP10.75□□□□□ -0.69
PDPN-201ENST00000294489 MIGA1Q8NAN2 632 aa10.75□□□□□ -0.69
PDPN-201ENST00000294489 NKX2-3Q8TAU0 364 aa10.75□□□□□ -0.69
PDPN-201ENST00000294489 RTFDC1Q9BY42 306 aaPredicted RBP10.75□□□□□ -0.69
PDPN-201ENST00000294489 NAPBQ9H115 298 aa10.75□□□□□ -0.69
PDPN-201ENST00000294489 NEDD4P46934 1319 aa10.75□□□□□ -0.69
PDPN-201ENST00000294489 H3BQV1 296 aa10.74□□□□□ -0.69
PDPN-201ENST00000294489 JAK2O60674 1132 aa10.74□□□□□ -0.69
PDPN-201ENST00000294489 PDIA3P30101 505 aaKnown RBP10.74□□□□□ -0.69
PDPN-201ENST00000294489 UBE2HP62256 183 aa10.74□□□□□ -0.69
PDPN-201ENST00000294489 KRT85P78386 507 aa10.74□□□□□ -0.69
PDPN-201ENST00000294489 IFFO2Q5TF58 517 aa10.74□□□□□ -0.69
PDPN-201ENST00000294489 MSL1Q68DK7 614 aa10.74□□□□□ -0.69
PDPN-201ENST00000294489 CDC37L1Q7L3B6 337 aa10.74□□□□□ -0.69
PDPN-201ENST00000294489 C7orf43Q8WVR3 580 aa10.74□□□□□ -0.69
PDPN-201ENST00000294489 FAM163AQ96GL9 167 aaPredicted RBP10.74□□□□□ -0.69
PDPN-201ENST00000294489 COA1Q9GZY4 146 aa10.74□□□□□ -0.69
PDPN-201ENST00000294489 CNNM2Q9H8M5 875 aa10.74□□□□□ -0.69
PDPN-201ENST00000294489 RBM27Q9P2N5 1060 aaKnown RBP10.74□□□□□ -0.69
PDPN-201ENST00000294489 MKRN1Q9UHC7 482 aaKnown RBP10.74□□□□□ -0.69
PDPN-201ENST00000294489 BRCA1P38398 1863 aaKnown RBP10.74□□□□□ -0.69
PDPN-201ENST00000294489 PCP11498 1178 aaKnown RBP10.74□□□□□ -0.69
PDPN-201ENST00000294489 AKNAD1Q5T1N1 836 aa10.74□□□□□ -0.69
PDPN-201ENST00000294489 CYB5R4Q7L1T6 521 aa10.74□□□□□ -0.69
PDPN-201ENST00000294489 SLC16A10Q8TF71 515 aa10.74□□□□□ -0.69
PDPN-201ENST00000294489 GPR101Q96P66 508 aaPredicted RBP10.74□□□□□ -0.69
PDPN-201ENST00000294489 TMEM63CQ9P1W3 806 aa10.74□□□□□ -0.69
PDPN-201ENST00000294489 DHX16O60231 1041 aaKnown RBP10.73□□□□□ -0.69
PDPN-201ENST00000294489 DYNLL1P63167 89 aaKnown RBP10.73□□□□□ -0.69
PDPN-201ENST00000294489 CCT2P78371 535 aaKnown RBP10.73□□□□□ -0.69
PDPN-201ENST00000294489 GSTO1P78417 241 aa10.73□□□□□ -0.69
PDPN-201ENST00000294489 SBK1Q52WX2 424 aa10.73□□□□□ -0.69
PDPN-201ENST00000294489 C2CD5Q86YS7 1000 aa10.73□□□□□ -0.69
PDPN-201ENST00000294489 RGS22Q8NE09 1264 aa10.73□□□□□ -0.69
PDPN-201ENST00000294489 IGDCC4Q8TDY8 1250 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms