RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 ATP2B3Q16720 1220 aa9.74□□□□□ -0.85
SCUBE3-201ENST00000274938 MLKLQ8NB16 471 aa9.74□□□□□ -0.85
SCUBE3-201ENST00000274938 EMILIN1Q9Y6C2 1016 aa9.74□□□□□ -0.85
SCUBE3-201ENST00000274938 MGEA5O60502 916 aa9.73□□□□□ -0.85
SCUBE3-201ENST00000274938 ITIH3Q06033 890 aa9.73□□□□□ -0.85
SCUBE3-201ENST00000274938 FCHSD1Q86WN1 690 aa9.73□□□□□ -0.85
SCUBE3-201ENST00000274938 EPSTI1Q96J88 318 aa9.73□□□□□ -0.85
SCUBE3-201ENST00000274938 FRMD4BQ9Y2L6 1034 aa9.73□□□□□ -0.85
SCUBE3-201ENST00000274938 SNRPA1P09661 255 aaKnown RBP9.73□□□□□ -0.85
SCUBE3-201ENST00000274938 CNNM4Q6P4Q7 775 aa9.73□□□□□ -0.85
SCUBE3-201ENST00000274938 SRGAP1Q7Z6B7 1085 aa9.73□□□□□ -0.85
SCUBE3-201ENST00000274938 Q9H521 79 aa9.73□□□□□ -0.85
SCUBE3-201ENST00000274938 RAD54L2Q9Y4B4 1467 aa9.73□□□□□ -0.85
SCUBE3-201ENST00000274938 STK10O94804 968 aaKnown RBP9.73□□□□□ -0.85
SCUBE3-201ENST00000274938 ZC3H6P61129 1189 aaKnown RBP9.73□□□□□ -0.85
SCUBE3-201ENST00000274938 RAPGEF1Q13905 1077 aa9.73□□□□□ -0.85
SCUBE3-201ENST00000274938 ASIC2Q16515 512 aa9.73□□□□□ -0.85
SCUBE3-201ENST00000274938 TSHZ3Q63HK5 1081 aa9.73□□□□□ -0.85
SCUBE3-201ENST00000274938 MPRIPQ6WCQ1 1025 aa9.73□□□□□ -0.85
SCUBE3-201ENST00000274938 IFNL2Q8IZJ0 200 aa9.73□□□□□ -0.85
SCUBE3-201ENST00000274938 LRRC2Q9BYS8 371 aa9.73□□□□□ -0.85
SCUBE3-201ENST00000274938 ZBTB3Q9H5J0 574 aa9.73□□□□□ -0.85
SCUBE3-201ENST00000274938 SPDYE3A6NKU9 549 aa9.73□□□□□ -0.85
SCUBE3-201ENST00000274938 UAP1Q16222 522 aaPredicted RBP9.73□□□□□ -0.85
SCUBE3-201ENST00000274938 CREB3L3Q68CJ9 461 aa9.73□□□□□ -0.85
SCUBE3-201ENST00000274938 PFDN4Q9NQP4 134 aa9.73□□□□□ -0.85
SCUBE3-201ENST00000274938 GOLGA8KD6RF30 607 aa9.73□□□□□ -0.85
SCUBE3-201ENST00000274938 NME9Q86XW9 330 aa9.73□□□□□ -0.85
SCUBE3-201ENST00000274938 TIAM1Q13009 1591 aa9.73□□□□□ -0.85
SCUBE3-201ENST00000274938 FANCCQ00597 558 aa9.73□□□□□ -0.85
SCUBE3-201ENST00000274938 WDR44Q5JSH3 913 aa9.73□□□□□ -0.85
SCUBE3-201ENST00000274938 LARSQ9P2J5 1176 aaKnown RBP9.73□□□□□ -0.85
SCUBE3-201ENST00000274938 E7EVH7 732 aa9.72□□□□□ -0.85
SCUBE3-201ENST00000274938 C6orf229H3BNL8 230 aa9.72□□□□□ -0.85
SCUBE3-201ENST00000274938 ZBTB17Q13105 803 aa9.72□□□□□ -0.85
SCUBE3-201ENST00000274938 SLC9C1Q4G0N8 1177 aa9.72□□□□□ -0.85
SCUBE3-201ENST00000274938 CFAP221Q4G0U5 840 aa9.72□□□□□ -0.85
SCUBE3-201ENST00000274938 ANKRD20A3Q5VUR7 823 aa9.72□□□□□ -0.85
SCUBE3-201ENST00000274938 HVCN1Q96D96 273 aa9.72□□□□□ -0.85
SCUBE3-201ENST00000274938 CCDC51Q96ER9 411 aa9.72□□□□□ -0.85
SCUBE3-201ENST00000274938 LLPHQ9BRT6 129 aaKnown RBP9.72□□□□□ -0.85
SCUBE3-201ENST00000274938 NUCKS1Q9H1E3 243 aaKnown RBP9.72□□□□□ -0.85
SCUBE3-201ENST00000274938 RBSNQ9H1K0 784 aa9.72□□□□□ -0.85
SCUBE3-201ENST00000274938 ZRANB1Q9UGI0 708 aa9.72□□□□□ -0.85
SCUBE3-201ENST00000274938 GRIN2BQ13224 1484 aa9.72□□□□□ -0.85
SCUBE3-201ENST00000274938 AP1ARQ63HQ0 302 aa9.72□□□□□ -0.85
SCUBE3-201ENST00000274938 P3H4Q92791 437 aa9.72□□□□□ -0.85
SCUBE3-201ENST00000274938 NAIPQ13075 1403 aa9.72□□□□□ -0.85
SCUBE3-201ENST00000274938 STX10O60499 249 aa9.72□□□□□ -0.85
SCUBE3-201ENST00000274938 TROVE2P10155 538 aaKnown RBP eCLIP9.72□□□□□ -0.85
SCUBE3-201ENST00000274938 GCKP35557 465 aa9.72□□□□□ -0.85
SCUBE3-201ENST00000274938 SCAF11Q99590 1463 aaKnown RBP9.72□□□□□ -0.85
SCUBE3-201ENST00000274938 POGZQ7Z3K3 1410 aa9.72□□□□□ -0.85
SCUBE3-201ENST00000274938 TSPYL2Q9H2G4 693 aaPredicted RBP9.72□□□□□ -0.85
SCUBE3-201ENST00000274938 PAG1Q9NWQ8 432 aa9.72□□□□□ -0.85
SCUBE3-201ENST00000274938 AGTPBP1Q9UPW5 1226 aa9.72□□□□□ -0.85
SCUBE3-201ENST00000274938 HIP1RO75146 1068 aa9.72□□□□□ -0.85
SCUBE3-201ENST00000274938 ZSCAN26Q16670 478 aa9.72□□□□□ -0.85
SCUBE3-201ENST00000274938 DDX27Q96GQ7 796 aaKnown RBP9.72□□□□□ -0.85
SCUBE3-201ENST00000274938 DCTPP1Q9H773 170 aa9.72□□□□□ -0.85
SCUBE3-201ENST00000274938 CTNND2Q9UQB3 1225 aa9.72□□□□□ -0.85
SCUBE3-201ENST00000274938 GEN1Q17RS7 908 aa9.72□□□□□ -0.85
SCUBE3-201ENST00000274938 ANKRD13DQ6ZTN6 518 aa9.72□□□□□ -0.85
SCUBE3-201ENST00000274938 MRPL50Q8N5N7 158 aaKnown RBP9.72□□□□□ -0.85
SCUBE3-201ENST00000274938 PCDHB15Q9Y5E8 787 aa9.72□□□□□ -0.85
SCUBE3-201ENST00000274938 TTC36A6NLP5 189 aa9.71□□□□□ -0.85
SCUBE3-201ENST00000274938 CALUO43852 315 aaPredicted RBP9.71□□□□□ -0.85
SCUBE3-201ENST00000274938 PLCG2P16885 1265 aa9.71□□□□□ -0.85
SCUBE3-201ENST00000274938 TCEANC2Q96MN5 208 aa9.71□□□□□ -0.85
SCUBE3-201ENST00000274938 BAIAP2L1Q9UHR4 511 aa9.71□□□□□ -0.85
SCUBE3-201ENST00000274938 PPP2R5EQ16537 467 aa9.71□□□□□ -0.85
SCUBE3-201ENST00000274938 MUM1Q2TAK8 710 aa9.71□□□□□ -0.85
SCUBE3-201ENST00000274938 NAA16Q6N069 864 aaPredicted RBP9.71□□□□□ -0.85
SCUBE3-201ENST00000274938 MIER3Q7Z3K6 550 aa9.71□□□□□ -0.85
SCUBE3-201ENST00000274938 TRAF5O00463 557 aa9.71□□□□□ -0.85
SCUBE3-201ENST00000274938 GIPC1O14908 333 aa9.71□□□□□ -0.85
SCUBE3-201ENST00000274938 PPFIA2O75334 1257 aa9.71□□□□□ -0.85
SCUBE3-201ENST00000274938 APBA1Q02410 837 aa9.71□□□□□ -0.85
SCUBE3-201ENST00000274938 TRMT1LQ7Z2T5 733 aaKnown RBP9.71□□□□□ -0.85
SCUBE3-201ENST00000274938 MEIS3Q99687 375 aa9.71□□□□□ -0.85
SCUBE3-201ENST00000274938 ZKSCAN3Q9BRR0 538 aa9.71□□□□□ -0.85
SCUBE3-201ENST00000274938 RAB17Q9H0T7 212 aa9.71□□□□□ -0.85
SCUBE3-201ENST00000274938 THEGQ9P2T0 379 aa9.71□□□□□ -0.85
SCUBE3-201ENST00000274938 CUTAO60888 179 aa9.71□□□□□ -0.86
SCUBE3-201ENST00000274938 NLRP12P59046 1061 aa9.71□□□□□ -0.86
SCUBE3-201ENST00000274938 SATB1Q01826 763 aa9.71□□□□□ -0.86
SCUBE3-201ENST00000274938 TXNDC9O14530 226 aa9.71□□□□□ -0.86
SCUBE3-201ENST00000274938 SND1Q7KZF4 910 aaKnown RBP eCLIP9.71□□□□□ -0.86
SCUBE3-201ENST00000274938 TBC1D31Q96DN5 1066 aa9.71□□□□□ -0.86
SCUBE3-201ENST00000274938 HAUS8Q9BT25 410 aa9.71□□□□□ -0.86
SCUBE3-201ENST00000274938 SYNRGQ9UMZ2 1314 aa9.71□□□□□ -0.86
SCUBE3-201ENST00000274938 TNNI2P48788 182 aa9.71□□□□□ -0.86
SCUBE3-201ENST00000274938 SLC9C2Q5TAH2 1124 aa9.71□□□□□ -0.86
SCUBE3-201ENST00000274938 SUDS3Q9H7L9 328 aaPredicted RBP9.71□□□□□ -0.86
SCUBE3-201ENST00000274938 MAGEB6P1A0A0J9YX57 407 aa9.7□□□□□ -0.86
SCUBE3-201ENST00000274938 APOBRQ0VD83 1088 aa9.7□□□□□ -0.86
SCUBE3-201ENST00000274938 HSP90AA5PQ58FG0 334 aa9.7□□□□□ -0.86
SCUBE3-201ENST00000274938 CCDC170Q8IYT3 715 aa9.7□□□□□ -0.86
SCUBE3-201ENST00000274938 DDX21Q9NR30 783 aaKnown RBP eCLIP9.7□□□□□ -0.86
SCUBE3-201ENST00000274938 KLHL14Q9P2G3 628 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms