RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 ZNF213O14771 459 aa14.48□□□□□ -0.09
BEST3-201ENST00000266661 SPTLC2O15270 562 aa14.48□□□□□ -0.09
BEST3-201ENST00000266661 UBE3CQ15386 1083 aa14.48□□□□□ -0.09
BEST3-201ENST00000266661 HLFQ16534 295 aa14.48□□□□□ -0.09
BEST3-201ENST00000266661 HSP90AB3PQ58FF7 597 aa14.48□□□□□ -0.09
BEST3-201ENST00000266661 NYAP1Q6ZVC0 841 aa14.48□□□□□ -0.09
BEST3-201ENST00000266661 ERCC4Q92889 916 aaPredicted RBP14.48□□□□□ -0.09
BEST3-201ENST00000266661 OSBPL5Q9H0X9 879 aaPredicted RBP14.48□□□□□ -0.09
BEST3-201ENST00000266661 DENND2AQ9ULE3 1009 aa14.48□□□□□ -0.09
BEST3-201ENST00000266661 LRP5O75197 1615 aa14.47□□□□□ -0.09
BEST3-201ENST00000266661 FAM237AA0A1B0GTK4 181 aa14.47□□□□□ -0.09
BEST3-201ENST00000266661 TCRBV5S4A2TA0A5A2 114 aa14.47□□□□□ -0.09
BEST3-201ENST00000266661 SH2B2O14492 632 aaPredicted RBP14.47□□□□□ -0.09
BEST3-201ENST00000266661 POLR3DP05423 398 aaPredicted RBP14.47□□□□□ -0.09
BEST3-201ENST00000266661 TNNT1P13805 278 aa14.47□□□□□ -0.09
BEST3-201ENST00000266661 CMA1P23946 247 aa14.47□□□□□ -0.09
BEST3-201ENST00000266661 ANO1Q5XXA6 986 aa14.47□□□□□ -0.09
BEST3-201ENST00000266661 KIF6Q6ZMV9 814 aa14.47□□□□□ -0.09
BEST3-201ENST00000266661 CYB5R4Q7L1T6 521 aa14.47□□□□□ -0.09
BEST3-201ENST00000266661 TBC1D10CQ8IV04 446 aa14.47□□□□□ -0.09
BEST3-201ENST00000266661 AOPEPQ8N6M6 819 aa14.47□□□□□ -0.09
BEST3-201ENST00000266661 CCDC85AQ96PX6 553 aaPredicted RBP14.47□□□□□ -0.09
BEST3-201ENST00000266661 GREM2Q9H772 168 aa14.47□□□□□ -0.09
BEST3-201ENST00000266661 PIH1D3Q9NQM4 214 aaKnown RBP14.47□□□□□ -0.09
BEST3-201ENST00000266661 ZMYM6O95789 1325 aa14.47□□□□□ -0.09
BEST3-201ENST00000266661 ITGA6P23229 1130 aa14.46□□□□□ -0.09
BEST3-201ENST00000266661 ARID4AP29374 1257 aaPredicted RBP14.46□□□□□ -0.09
BEST3-201ENST00000266661 NCAPHQ15003 741 aa14.46□□□□□ -0.09
BEST3-201ENST00000266661 SLC39A14Q15043 492 aa14.46□□□□□ -0.09
BEST3-201ENST00000266661 STK38Q15208 465 aa14.46□□□□□ -0.09
BEST3-201ENST00000266661 ALX1Q15699 326 aa14.46□□□□□ -0.09
BEST3-201ENST00000266661 C16orf45Q96MC5 204 aaPredicted RBP14.46□□□□□ -0.09
BEST3-201ENST00000266661 CAMKK2Q96RR4 588 aa14.46□□□□□ -0.09
BEST3-201ENST00000266661 LRRC4BQ9NT99 713 aa14.46□□□□□ -0.09
BEST3-201ENST00000266661 HPSEQ9Y251 543 aa14.46□□□□□ -0.09
BEST3-201ENST00000266661 PAXBP1Q9Y5B6 917 aa14.46□□□□□ -0.09
BEST3-201ENST00000266661 USP27XA6NNY8 438 aa14.46□□□□□ -0.1
BEST3-201ENST00000266661 BECN2A8MW95 431 aa14.46□□□□□ -0.1
BEST3-201ENST00000266661 WDHD1O75717 1129 aaPredicted RBP14.46□□□□□ -0.1
BEST3-201ENST00000266661 CTSWP56202 376 aa14.46□□□□□ -0.1
BEST3-201ENST00000266661 NCBP1Q09161 790 aaKnown RBP14.46□□□□□ -0.1
BEST3-201ENST00000266661 NTRK3Q16288 839 aa14.46□□□□□ -0.1
BEST3-201ENST00000266661 DPCR1Q3MIW9 517 aa14.46□□□□□ -0.1
BEST3-201ENST00000266661 METTL24Q5JXM2 366 aa14.46□□□□□ -0.1
BEST3-201ENST00000266661 LDHAL6AQ6ZMR3 332 aa14.46□□□□□ -0.1
BEST3-201ENST00000266661 SMAP1Q8IYB5 467 aaPredicted RBP14.46□□□□□ -0.1
BEST3-201ENST00000266661 SLC4A9Q96Q91 983 aa14.46□□□□□ -0.1
BEST3-201ENST00000266661 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.46□□□□□ -0.1
BEST3-201ENST00000266661 NAT10Q9H0A0 1025 aaKnown RBP14.46□□□□□ -0.1
BEST3-201ENST00000266661 ANGEL1Q9UNK9 670 aaKnown RBP14.46□□□□□ -0.1
BEST3-201ENST00000266661 TAF1LQ8IZX4 1826 aa14.45□□□□□ -0.1
BEST3-201ENST00000266661 CCDC69A6NI79 296 aa14.45□□□□□ -0.1
BEST3-201ENST00000266661 ZNF202O95125 648 aa14.45□□□□□ -0.1
BEST3-201ENST00000266661 FGFR2P21802 821 aa14.45□□□□□ -0.1
BEST3-201ENST00000266661 NLRP12P59046 1061 aa14.45□□□□□ -0.1
BEST3-201ENST00000266661 PTPAQ15257 358 aa14.45□□□□□ -0.1
BEST3-201ENST00000266661 TAF7LQ5H9L4 462 aa14.45□□□□□ -0.1
BEST3-201ENST00000266661 RALYLQ86SE5 291 aaKnown RBP14.45□□□□□ -0.1
BEST3-201ENST00000266661 IGDCC4Q8TDY8 1250 aa14.45□□□□□ -0.1
BEST3-201ENST00000266661 TIGD1Q96MW7 591 aa14.45□□□□□ -0.1
BEST3-201ENST00000266661 SDF4Q9BRK5 362 aa14.45□□□□□ -0.1
BEST3-201ENST00000266661 FAM217BQ9NTX9 383 aaPredicted RBP14.45□□□□□ -0.1
BEST3-201ENST00000266661 IMPACTQ9P2X3 320 aa14.45□□□□□ -0.1
BEST3-201ENST00000266661 ANKRD36CQ5JPF3 1778 aa14.44□□□□□ -0.1
BEST3-201ENST00000266661 PDE8BO95263 885 aa14.44□□□□□ -0.1
BEST3-201ENST00000266661 STARD3NLO95772 234 aa14.44□□□□□ -0.1
BEST3-201ENST00000266661 CYP19A1P11511 503 aaPredicted RBP14.44□□□□□ -0.1
BEST3-201ENST00000266661 SKILP12757 684 aa14.44□□□□□ -0.1
BEST3-201ENST00000266661 BAG6P46379 1132 aa14.44□□□□□ -0.1
BEST3-201ENST00000266661 TTF1Q15361 905 aaPredicted RBP14.44□□□□□ -0.1
BEST3-201ENST00000266661 TXNRD1Q16881 649 aa14.44□□□□□ -0.1
BEST3-201ENST00000266661 SLC9C2Q5TAH2 1124 aa14.44□□□□□ -0.1
BEST3-201ENST00000266661 RAB11FIP4Q86YS3 637 aa14.44□□□□□ -0.1
BEST3-201ENST00000266661 SENP2Q9HC62 589 aa14.44□□□□□ -0.1
BEST3-201ENST00000266661 TUBE1Q9UJT0 475 aa14.44□□□□□ -0.1
BEST3-201ENST00000266661 MROH7-TTC4A0A0A0MT08 1334 aa14.44□□□□□ -0.1
BEST3-201ENST00000266661 PFKFB1P16118 471 aa14.44□□□□□ -0.1
BEST3-201ENST00000266661 CDC27P30260 824 aa14.44□□□□□ -0.1
BEST3-201ENST00000266661 TPD52L1Q16890 204 aaPredicted RBP14.44□□□□□ -0.1
BEST3-201ENST00000266661 APOA5Q6Q788 366 aa14.44□□□□□ -0.1
BEST3-201ENST00000266661 SGMS1Q86VZ5 419 aa14.44□□□□□ -0.1
BEST3-201ENST00000266661 CCDC125Q86Z20 511 aa14.44□□□□□ -0.1
BEST3-201ENST00000266661 AIFM3Q96NN9 605 aa14.44□□□□□ -0.1
BEST3-201ENST00000266661 STRBPQ96SI9 672 aaKnown RBP14.44□□□□□ -0.1
BEST3-201ENST00000266661 MAP3K14Q99558 947 aa14.44□□□□□ -0.1
BEST3-201ENST00000266661 HSD3B7Q9H2F3 369 aa14.44□□□□□ -0.1
BEST3-201ENST00000266661 ARAP2Q8WZ64 1704 aa14.43□□□□□ -0.1
BEST3-201ENST00000266661 ANKRD18BA2A2Z9 1011 aa14.43□□□□□ -0.1
BEST3-201ENST00000266661 CPLX1O14810 134 aa14.43□□□□□ -0.1
BEST3-201ENST00000266661 PPP6R2O75170 966 aa14.43□□□□□ -0.1
BEST3-201ENST00000266661 SLC3A2P08195 630 aaKnown RBP14.43□□□□□ -0.1
BEST3-201ENST00000266661 PDE6AP16499 860 aa14.43□□□□□ -0.1
BEST3-201ENST00000266661 U2AF2P26368 475 aaKnown RBP eCLIP14.43□□□□□ -0.1
BEST3-201ENST00000266661 GSDMDP57764 484 aa14.43□□□□□ -0.1
BEST3-201ENST00000266661 SF3A1Q15459 793 aaKnown RBP14.43□□□□□ -0.1
BEST3-201ENST00000266661 CCDC102BQ68D86 513 aa14.43□□□□□ -0.1
BEST3-201ENST00000266661 SMIM5Q71RC9 77 aa14.43□□□□□ -0.1
BEST3-201ENST00000266661 PDCL2Q8N4E4 241 aa14.43□□□□□ -0.1
BEST3-201ENST00000266661 TACC3Q9Y6A5 838 aa14.43□□□□□ -0.1
BEST3-201ENST00000266661 ZNF532Q9HCE3 1301 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms