RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 TRDNQ13061 729 aa20.11■□□□□ 0.81
TRAM1-201ENST00000262213 ARGLU1Q9NWB6 273 aaPredicted RBP20.11■□□□□ 0.81
TRAM1-201ENST00000262213 PDE4BQ07343 736 aa20.11■□□□□ 0.81
TRAM1-201ENST00000262213 REXO1L1PQ8IX06 675 aa20.11■□□□□ 0.81
TRAM1-201ENST00000262213 CNNM3Q8NE01 707 aa20.11■□□□□ 0.81
TRAM1-201ENST00000262213 PHLPP2Q6ZVD8 1323 aa20.1■□□□□ 0.81
TRAM1-201ENST00000262213 CDC27P30260 824 aa20.1■□□□□ 0.81
TRAM1-201ENST00000262213 CYB5R4Q7L1T6 521 aa20.1■□□□□ 0.81
TRAM1-201ENST00000262213 METTL16Q86W50 562 aaKnown RBP20.1■□□□□ 0.81
TRAM1-201ENST00000262213 VSTM4Q8IW00 320 aa20.1■□□□□ 0.81
TRAM1-201ENST00000262213 INCENPQ9NQS7 918 aa20.1■□□□□ 0.81
TRAM1-201ENST00000262213 PCDHA5Q9Y5H7 936 aa20.1■□□□□ 0.81
TRAM1-201ENST00000262213 NWD2Q9ULI1 1742 aa20.1■□□□□ 0.81
TRAM1-201ENST00000262213 CCP110O43303 1012 aa20.1■□□□□ 0.81
TRAM1-201ENST00000262213 GNG11P61952 73 aa20.1■□□□□ 0.81
TRAM1-201ENST00000262213 TEX35Q5T0J7 233 aa20.1■□□□□ 0.81
TRAM1-201ENST00000262213 NFXL1Q6ZNB6 911 aa20.1■□□□□ 0.81
TRAM1-201ENST00000262213 FOXP4Q8IVH2 680 aaPredicted RBP20.1■□□□□ 0.81
TRAM1-201ENST00000262213 APPBP2Q92624 585 aa20.1■□□□□ 0.81
TRAM1-201ENST00000262213 TUBE1Q9UJT0 475 aa20.1■□□□□ 0.81
TRAM1-201ENST00000262213 KCNJ6P48051 423 aa20.09■□□□□ 0.81
TRAM1-201ENST00000262213 ADKP55263 362 aaKnown RBP20.09■□□□□ 0.81
TRAM1-201ENST00000262213 LRRFIP1Q32MZ4 808 aaKnown RBP20.09■□□□□ 0.81
TRAM1-201ENST00000262213 ADAMTS7Q9UKP4 1686 aa20.09■□□□□ 0.81
TRAM1-201ENST00000262213 B4E1Z4 1266 aa20.09■□□□□ 0.81
TRAM1-201ENST00000262213 ZNF827Q17R98 1081 aa20.09■□□□□ 0.81
TRAM1-201ENST00000262213 TBC1D10CQ8IV04 446 aa20.09■□□□□ 0.81
TRAM1-201ENST00000262213 TRMT44Q8IYL2 757 aaKnown RBP20.09■□□□□ 0.81
TRAM1-201ENST00000262213 WDR24Q96S15 920 aa20.09■□□□□ 0.81
TRAM1-201ENST00000262213 PPP2R2CQ9Y2T4 447 aa20.09■□□□□ 0.81
TRAM1-201ENST00000262213 PARP3Q9Y6F1 533 aa20.09■□□□□ 0.81
TRAM1-201ENST00000262213 TADA3O75528 432 aa20.08■□□□□ 0.81
TRAM1-201ENST00000262213 CDK11BP21127 795 aaKnown RBP20.08■□□□□ 0.81
TRAM1-201ENST00000262213 FBXL16Q8N461 479 aa20.08■□□□□ 0.81
TRAM1-201ENST00000262213 JMYQ8N9B5 988 aa20.08■□□□□ 0.81
TRAM1-201ENST00000262213 VWA3AA6NCI4 1184 aa20.08■□□□□ 0.8
TRAM1-201ENST00000262213 CCDC34Q96HJ3 373 aa20.08■□□□□ 0.8
TRAM1-201ENST00000262213 DESI2Q9BSY9 194 aa20.08■□□□□ 0.8
TRAM1-201ENST00000262213 NBPF3Q9H094 633 aa20.08■□□□□ 0.8
TRAM1-201ENST00000262213 INTS13Q9NVM9 706 aa20.08■□□□□ 0.8
TRAM1-201ENST00000262213 KCNH3Q9ULD8 1083 aa20.08■□□□□ 0.8
TRAM1-201ENST00000262213 ANGEL1Q9UNK9 670 aaKnown RBP20.08■□□□□ 0.8
TRAM1-201ENST00000262213 ZFYP08048 801 aaPredicted RBP20.07■□□□□ 0.8
TRAM1-201ENST00000262213 ATP2B1P20020 1258 aa20.07■□□□□ 0.8
TRAM1-201ENST00000262213 PTPAQ15257 358 aa20.07■□□□□ 0.8
TRAM1-201ENST00000262213 CCDC102BQ68D86 513 aa20.07■□□□□ 0.8
TRAM1-201ENST00000262213 ZCCHC17Q9NP64 241 aaKnown RBP20.07■□□□□ 0.8
TRAM1-201ENST00000262213 HPSEQ9Y251 543 aa20.07■□□□□ 0.8
TRAM1-201ENST00000262213 KARSQ15046 597 aaKnown RBP20.07■□□□□ 0.8
TRAM1-201ENST00000262213 FAM89AQ96GI7 184 aa20.07■□□□□ 0.8
TRAM1-201ENST00000262213 ZSWIM4Q9H7M6 989 aa20.07■□□□□ 0.8
TRAM1-201ENST00000262213 ZMYM6O95789 1325 aa20.07■□□□□ 0.8
TRAM1-201ENST00000262213 ZSCAN12O43309 604 aa20.06■□□□□ 0.8
TRAM1-201ENST00000262213 IDH1O75874 414 aaKnown RBP20.06■□□□□ 0.8
TRAM1-201ENST00000262213 BMP6P22004 513 aa20.06■□□□□ 0.8
TRAM1-201ENST00000262213 CASQ1P31415 396 aa20.06■□□□□ 0.8
TRAM1-201ENST00000262213 TRIM29Q14134 588 aa20.06■□□□□ 0.8
TRAM1-201ENST00000262213 DHX8Q14562 1220 aaKnown RBP20.06■□□□□ 0.8
TRAM1-201ENST00000262213 TOGARAM2Q6ZUX3 1019 aa20.06■□□□□ 0.8
TRAM1-201ENST00000262213 GRAMD1CQ8IYS0 662 aa20.06■□□□□ 0.8
TRAM1-201ENST00000262213 CCDC82Q8N4S0 544 aa20.06■□□□□ 0.8
TRAM1-201ENST00000262213 TIGD1Q96MW7 591 aa20.06■□□□□ 0.8
TRAM1-201ENST00000262213 CIAO1O76071 339 aa20.06■□□□□ 0.8
TRAM1-201ENST00000262213 KRBA2Q6ZNG9 492 aa20.06■□□□□ 0.8
TRAM1-201ENST00000262213 CCDC191Q8NCU4 936 aa20.06■□□□□ 0.8
TRAM1-201ENST00000262213 BAG1Q99933 345 aaPredicted RBP20.06■□□□□ 0.8
TRAM1-201ENST00000262213 ZRANB2O95218 330 aaKnown RBP eCLIP20.06■□□□□ 0.8
TRAM1-201ENST00000262213 SLC9C2Q5TAH2 1124 aa20.06■□□□□ 0.8
TRAM1-201ENST00000262213 RESP18Q5W5W9 173 aa20.06■□□□□ 0.8
TRAM1-201ENST00000262213 SLC26A6Q9BXS9 759 aa20.06■□□□□ 0.8
TRAM1-201ENST00000262213 CAMTA1Q9Y6Y1 1673 aa20.05■□□□□ 0.8
TRAM1-201ENST00000262213 TUBB4AP04350 444 aa20.05■□□□□ 0.8
TRAM1-201ENST00000262213 IARSP41252 1262 aaKnown RBP20.05■□□□□ 0.8
TRAM1-201ENST00000262213 GRIN1Q05586 938 aa20.05■□□□□ 0.8
TRAM1-201ENST00000262213 CPLX2Q6PUV4 134 aaKnown RBP20.05■□□□□ 0.8
TRAM1-201ENST00000262213 APOA5Q6Q788 366 aa20.05■□□□□ 0.8
TRAM1-201ENST00000262213 NEK11Q8NG66 645 aa20.05■□□□□ 0.8
TRAM1-201ENST00000262213 MAP3K14Q99558 947 aa20.05■□□□□ 0.8
TRAM1-201ENST00000262213 PROSER2Q86WR7 435 aaPredicted RBP20.05■□□□□ 0.8
TRAM1-201ENST00000262213 TMEM139Q8IV31 216 aa20.05■□□□□ 0.8
TRAM1-201ENST00000262213 SYNE4Q8N205 404 aa20.05■□□□□ 0.8
TRAM1-201ENST00000262213 AKAP2Q9Y2D5 859 aa20.05■□□□□ 0.8
TRAM1-201ENST00000262213 GOLGA8AA7E2F4 631 aa20.04■□□□□ 0.8
TRAM1-201ENST00000262213 EFCAB8A8MWE9 144 aa20.04■□□□□ 0.8
TRAM1-201ENST00000262213 ARHGAP6O43182 974 aa20.04■□□□□ 0.8
TRAM1-201ENST00000262213 PPP6R2O75170 966 aa20.04■□□□□ 0.8
TRAM1-201ENST00000262213 CPDO75976 1380 aa20.04■□□□□ 0.8
TRAM1-201ENST00000262213 ZBTB43O43298 467 aa20.04■□□□□ 0.8
TRAM1-201ENST00000262213 PRR29P0C7W0 189 aa20.04■□□□□ 0.8
TRAM1-201ENST00000262213 CYP2C19P33261 490 aa20.04■□□□□ 0.8
TRAM1-201ENST00000262213 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.04■□□□□ 0.8
TRAM1-201ENST00000262213 NFE2L3Q9Y4A8 694 aa20.04■□□□□ 0.8
TRAM1-201ENST00000262213 SH2B2O14492 632 aaPredicted RBP20.03■□□□□ 0.8
TRAM1-201ENST00000262213 RANBP6O60518 1105 aaKnown RBP20.03■□□□□ 0.8
TRAM1-201ENST00000262213 SASH3O75995 380 aa20.03■□□□□ 0.8
TRAM1-201ENST00000262213 CDKL5O76039 1030 aa20.03■□□□□ 0.8
TRAM1-201ENST00000262213 MCAMP43121 646 aa20.03■□□□□ 0.8
TRAM1-201ENST00000262213 FMR1Q06787 632 aaKnown RBP eCLIP20.03■□□□□ 0.8
TRAM1-201ENST00000262213 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.03■□□□□ 0.8
TRAM1-201ENST00000262213 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms