RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 EPB41L4AQ9HCS5 686 aaPredicted RBP29.66■■■□□ 2.34
RAB40C-201ENST00000248139 MYH7P12883 1935 aa29.66■■■□□ 2.34
RAB40C-201ENST00000248139 PDE8AO60658 829 aa29.66■■■□□ 2.34
RAB40C-201ENST00000248139 ZMYM6O95789 1325 aa29.66■■■□□ 2.34
RAB40C-201ENST00000248139 NBPF11Q86T75 865 aa29.66■■■□□ 2.34
RAB40C-201ENST00000248139 CHMP4CQ96CF2 233 aa29.66■■■□□ 2.34
RAB40C-201ENST00000248139 RANBP6O60518 1105 aaKnown RBP29.65■■■□□ 2.34
RAB40C-201ENST00000248139 GNL2Q13823 731 aaKnown RBP29.65■■■□□ 2.34
RAB40C-201ENST00000248139 RRP12Q5JTH9 1297 aaKnown RBP29.65■■■□□ 2.34
RAB40C-201ENST00000248139 MBD4O95243 580 aa29.65■■■□□ 2.34
RAB40C-201ENST00000248139 PRDM10Q9NQV6 1147 aa29.65■■■□□ 2.34
RAB40C-201ENST00000248139 CMTR1Q8N1G2 835 aaKnown RBP29.64■■■□□ 2.34
RAB40C-201ENST00000248139 IGDCC4Q8TDY8 1250 aa29.64■■■□□ 2.34
RAB40C-201ENST00000248139 IQSEC3Q9UPP2 1182 aaPredicted RBP29.64■■■□□ 2.34
RAB40C-201ENST00000248139 SMC2O95347 1197 aa29.64■■■□□ 2.33
RAB40C-201ENST00000248139 RASGRF1Q13972 1273 aa29.64■■■□□ 2.33
RAB40C-201ENST00000248139 TTF1Q15361 905 aaPredicted RBP29.64■■■□□ 2.33
RAB40C-201ENST00000248139 UBE3CQ15386 1083 aa29.64■■■□□ 2.33
RAB40C-201ENST00000248139 TMEM67Q5HYA8 995 aa29.64■■■□□ 2.33
RAB40C-201ENST00000248139 TOMM22Q9NS69 142 aa29.64■■■□□ 2.33
RAB40C-201ENST00000248139 ZSWIM5Q9P217 1185 aa29.64■■■□□ 2.33
RAB40C-201ENST00000248139 PTPN21Q16825 1174 aa29.63■■■□□ 2.33
RAB40C-201ENST00000248139 PPP4R3BQ5MIZ7 849 aa29.63■■■□□ 2.33
RAB40C-201ENST00000248139 MTERF4Q7Z6M4 381 aaKnown RBP29.63■■■□□ 2.33
RAB40C-201ENST00000248139 NAT10Q9H0A0 1025 aaKnown RBP29.63■■■□□ 2.33
RAB40C-201ENST00000248139 IFNKQ9P0W0 207 aa29.63■■■□□ 2.33
RAB40C-201ENST00000248139 SPECC1Q5M775 1068 aa29.63■■■□□ 2.33
RAB40C-201ENST00000248139 XPO4Q9C0E2 1151 aaKnown RBP29.63■■■□□ 2.33
RAB40C-201ENST00000248139 FAM217BQ9NTX9 383 aaPredicted RBP29.63■■■□□ 2.33
RAB40C-201ENST00000248139 ZBTB43O43298 467 aa29.62■■■□□ 2.33
RAB40C-201ENST00000248139 CCZ1BP86790 482 aa29.62■■■□□ 2.33
RAB40C-201ENST00000248139 CCZ1P86791 482 aaPredicted RBP29.62■■■□□ 2.33
RAB40C-201ENST00000248139 SPATA5Q8NB90 893 aa29.62■■■□□ 2.33
RAB40C-201ENST00000248139 LY9Q9HBG7 655 aa29.62■■■□□ 2.33
RAB40C-201ENST00000248139 SUSD4Q5VX71 490 aa29.62■■■□□ 2.33
RAB40C-201ENST00000248139 GOLGA8AA7E2F4 631 aa29.61■■■□□ 2.33
RAB40C-201ENST00000248139 LMOD1P29536 600 aaPredicted RBP29.61■■■□□ 2.33
RAB40C-201ENST00000248139 IFNL3Q8IZI9 196 aa29.61■■■□□ 2.33
RAB40C-201ENST00000248139 SLC26A6Q9BXS9 759 aa29.61■■■□□ 2.33
RAB40C-201ENST00000248139 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.61■■■□□ 2.33
RAB40C-201ENST00000248139 ARID4AP29374 1257 aaPredicted RBP29.61■■■□□ 2.33
RAB40C-201ENST00000248139 GUCY1A2P33402 732 aa29.61■■■□□ 2.33
RAB40C-201ENST00000248139 SLC39A14Q15043 492 aa29.61■■■□□ 2.33
RAB40C-201ENST00000248139 PUM3Q15397 648 aaKnown RBP29.61■■■□□ 2.33
RAB40C-201ENST00000248139 SHC4Q6S5L8 630 aa29.61■■■□□ 2.33
RAB40C-201ENST00000248139 ABCC12Q96J65 1359 aa29.61■■■□□ 2.33
RAB40C-201ENST00000248139 BCAMP50895 628 aa29.6■■■□□ 2.33
RAB40C-201ENST00000248139 MIGA1Q8NAN2 632 aa29.6■■■□□ 2.33
RAB40C-201ENST00000248139 LPIN2Q92539 896 aa29.6■■■□□ 2.33
RAB40C-201ENST00000248139 NAPBQ9H115 298 aa29.6■■■□□ 2.33
RAB40C-201ENST00000248139 SMIM22K7EJ46 135 aa29.6■■■□□ 2.33
RAB40C-201ENST00000248139 IFIT3O14879 490 aaKnown RBP29.6■■■□□ 2.33
RAB40C-201ENST00000248139 IARSP41252 1262 aaKnown RBP29.6■■■□□ 2.33
RAB40C-201ENST00000248139 CBX1P83916 185 aa29.6■■■□□ 2.33
RAB40C-201ENST00000248139 NTRK3Q16288 839 aa29.6■■■□□ 2.33
RAB40C-201ENST00000248139 CCDC94Q9BW85 323 aaPredicted RBP29.6■■■□□ 2.33
RAB40C-201ENST00000248139 ITGB4P16144 1822 aa29.6■■■□□ 2.33
RAB40C-201ENST00000248139 SPDYE4A6NLX3 237 aa29.59■■■□□ 2.33
RAB40C-201ENST00000248139 CMA1P23946 247 aa29.59■■■□□ 2.33
RAB40C-201ENST00000248139 ATP1A3P13637 1013 aa29.59■■■□□ 2.33
RAB40C-201ENST00000248139 FGFR2P21802 821 aa29.59■■■□□ 2.33
RAB40C-201ENST00000248139 PNOCQ13519 176 aa29.59■■■□□ 2.33
RAB40C-201ENST00000248139 BCL9O00512 1426 aa29.59■■■□□ 2.33
RAB40C-201ENST00000248139 C4AP0C0L4 1744 aa29.59■■■□□ 2.33
RAB40C-201ENST00000248139 C4BP0C0L5 1744 aa29.59■■■□□ 2.33
RAB40C-201ENST00000248139 WTIPA6NIX2 430 aaPredicted RBP29.58■■■□□ 2.33
RAB40C-201ENST00000248139 SYKP43405 635 aa29.58■■■□□ 2.33
RAB40C-201ENST00000248139 TMC6Q7Z403 805 aa29.58■■■□□ 2.33
RAB40C-201ENST00000248139 ZNF512BQ96KM6 892 aaPredicted RBP29.58■■■□□ 2.33
RAB40C-201ENST00000248139 ABCA3Q99758 1704 aa29.58■■■□□ 2.33
RAB40C-201ENST00000248139 CEP135Q66GS9 1140 aa29.58■■■□□ 2.33
RAB40C-201ENST00000248139 ACSBG1Q96GR2 724 aa29.58■■■□□ 2.33
RAB40C-201ENST00000248139 CTIFO43310 598 aaKnown RBP29.58■■■□□ 2.33
RAB40C-201ENST00000248139 LCORLQ8N3X6 602 aa29.58■■■□□ 2.33
RAB40C-201ENST00000248139 PDCL2Q8N4E4 241 aa29.58■■■□□ 2.33
RAB40C-201ENST00000248139 MPHOSPH8Q99549 860 aa29.58■■■□□ 2.33
RAB40C-201ENST00000248139 KCNJ14Q9UNX9 436 aa29.58■■■□□ 2.33
RAB40C-201ENST00000248139 NCAPHQ15003 741 aa29.57■■■□□ 2.32
RAB40C-201ENST00000248139 WDR19Q8NEZ3 1342 aa29.57■■■□□ 2.32
RAB40C-201ENST00000248139 SLIT2O94813 1529 aa29.57■■■□□ 2.32
RAB40C-201ENST00000248139 NLRP12P59046 1061 aa29.57■■■□□ 2.32
RAB40C-201ENST00000248139 PTPAQ15257 358 aa29.57■■■□□ 2.32
RAB40C-201ENST00000248139 ZNF34Q8IZ26 560 aa29.57■■■□□ 2.32
RAB40C-201ENST00000248139 PATL2C9JE40 543 aaKnown RBP29.56■■■□□ 2.32
RAB40C-201ENST00000248139 UQCRFS1P1P0C7P4 283 aa29.56■■■□□ 2.32
RAB40C-201ENST00000248139 RBM6P78332 1123 aaKnown RBP29.56■■■□□ 2.32
RAB40C-201ENST00000248139 NCBP1Q09161 790 aaKnown RBP29.56■■■□□ 2.32
RAB40C-201ENST00000248139 NOL12Q9UGY1 213 aaKnown RBP eCLIP29.56■■■□□ 2.32
RAB40C-201ENST00000248139 SLC12A7Q9Y666 1083 aa29.56■■■□□ 2.32
RAB40C-201ENST00000248139 V9GYY5 206 aaPredicted RBP29.56■■■□□ 2.32
RAB40C-201ENST00000248139 SMTNL1A8MU46 457 aa29.56■■■□□ 2.32
RAB40C-201ENST00000248139 EXOC5O00471 708 aa29.56■■■□□ 2.32
RAB40C-201ENST00000248139 U2AF2P26368 475 aaKnown RBP eCLIP29.56■■■□□ 2.32
RAB40C-201ENST00000248139 HSP90AA4PQ58FG1 418 aa29.56■■■□□ 2.32
RAB40C-201ENST00000248139 GSG1L2A8MUP6 293 aa29.55■■■□□ 2.32
RAB40C-201ENST00000248139 FOXN1O15353 648 aa29.55■■■□□ 2.32
RAB40C-201ENST00000248139 CPLX2Q6PUV4 134 aaKnown RBP29.55■■■□□ 2.32
RAB40C-201ENST00000248139 CCDC112Q8NEF3 446 aa29.55■■■□□ 2.32
RAB40C-201ENST00000248139 MAP3K14Q99558 947 aa29.55■■■□□ 2.32
RAB40C-201ENST00000248139 NUP98P52948 1817 aa29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms