RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 RNF217Q8TC41 542 aa4.39□□□□□ -1.71
UFM1-201ENST00000239878 CLP1Q92989 425 aaKnown RBP4.39□□□□□ -1.71
UFM1-201ENST00000239878 TRERF1Q96PN7 1200 aa4.39□□□□□ -1.71
UFM1-201ENST00000239878 MAF1Q9H063 256 aa4.39□□□□□ -1.71
UFM1-201ENST00000239878 PRKAG2Q9UGJ0 569 aa4.39□□□□□ -1.71
UFM1-201ENST00000239878 NOVA2Q9UNW9 492 aaKnown RBP4.39□□□□□ -1.71
UFM1-201ENST00000239878 FAM177BA6PVY3 158 aa4.38□□□□□ -1.71
UFM1-201ENST00000239878 SCAMP3O14828 347 aaKnown RBP4.38□□□□□ -1.71
UFM1-201ENST00000239878 ALDH1L1O75891 902 aa4.38□□□□□ -1.71
UFM1-201ENST00000239878 ZBTB7AO95365 584 aa4.38□□□□□ -1.71
UFM1-201ENST00000239878 RFC4P35249 363 aa4.38□□□□□ -1.71
UFM1-201ENST00000239878 FOXO4P98177 505 aa4.38□□□□□ -1.71
UFM1-201ENST00000239878 SF3B3Q15393 1217 aaKnown RBP4.38□□□□□ -1.71
UFM1-201ENST00000239878 PLEKHG6Q3KR16 790 aa4.38□□□□□ -1.71
UFM1-201ENST00000239878 STYK1Q6J9G0 422 aa4.38□□□□□ -1.71
UFM1-201ENST00000239878 ANKRD13DQ6ZTN6 518 aa4.38□□□□□ -1.71
UFM1-201ENST00000239878 ZBTB38Q8NAP3 1195 aaPredicted RBP4.38□□□□□ -1.71
UFM1-201ENST00000239878 CCDC191Q8NCU4 936 aa4.38□□□□□ -1.71
UFM1-201ENST00000239878 BRIP1Q9BX63 1249 aa4.38□□□□□ -1.71
UFM1-201ENST00000239878 PRM3Q9NNZ6 103 aa4.38□□□□□ -1.71
UFM1-201ENST00000239878 PDZRN3Q9UPQ7 1066 aa4.38□□□□□ -1.71
UFM1-201ENST00000239878 KIF16BQ96L93 1317 aa4.38□□□□□ -1.71
UFM1-201ENST00000239878 LTBP3Q9NS15 1303 aa4.38□□□□□ -1.71
UFM1-201ENST00000239878 TAF1P21675 1872 aa4.38□□□□□ -1.71
UFM1-201ENST00000239878 KIF3CO14782 793 aa4.38□□□□□ -1.71
UFM1-201ENST00000239878 ZNF500O60304 480 aaPredicted RBP4.38□□□□□ -1.71
UFM1-201ENST00000239878 AP1G2O75843 785 aa4.38□□□□□ -1.71
UFM1-201ENST00000239878 MCM4P33991 863 aa4.38□□□□□ -1.71
UFM1-201ENST00000239878 IGBP1P78318 339 aa4.38□□□□□ -1.71
UFM1-201ENST00000239878 MTX1Q13505 466 aa4.38□□□□□ -1.71
UFM1-201ENST00000239878 COL19A1Q14993 1142 aa4.38□□□□□ -1.71
UFM1-201ENST00000239878 FAM161AQ3B820 660 aa4.38□□□□□ -1.71
UFM1-201ENST00000239878 HSP90AB3PQ58FF7 597 aa4.38□□□□□ -1.71
UFM1-201ENST00000239878 SASS6Q6UVJ0 657 aa4.38□□□□□ -1.71
UFM1-201ENST00000239878 ANKRD44Q8N8A2 993 aa4.38□□□□□ -1.71
UFM1-201ENST00000239878 LINS1Q8NG48 757 aa4.38□□□□□ -1.71
UFM1-201ENST00000239878 TIGD1Q96MW7 591 aa4.38□□□□□ -1.71
UFM1-201ENST00000239878 ASB16Q96NS5 453 aa4.38□□□□□ -1.71
UFM1-201ENST00000239878 LAMB1P07942 1786 aa4.38□□□□□ -1.71
UFM1-201ENST00000239878 PAPPA2Q9BXP8 1791 aa4.38□□□□□ -1.71
UFM1-201ENST00000239878 hCG_2014768A0A024R1R8 64 aa4.37□□□□□ -1.71
UFM1-201ENST00000239878 SERPINB2P05120 415 aa4.37□□□□□ -1.71
UFM1-201ENST00000239878 SRGNP10124 158 aa4.37□□□□□ -1.71
UFM1-201ENST00000239878 TRIM27P14373 513 aa4.37□□□□□ -1.71
UFM1-201ENST00000239878 GCKRQ14397 625 aa4.37□□□□□ -1.71
UFM1-201ENST00000239878 NBPF20Q3BBV1 942 aa4.37□□□□□ -1.71
UFM1-201ENST00000239878 FOXD4L6Q3SYB3 417 aaPredicted RBP4.37□□□□□ -1.71
UFM1-201ENST00000239878 FOXD4L3Q6VB84 417 aaPredicted RBP4.37□□□□□ -1.71
UFM1-201ENST00000239878 KIF6Q6ZMV9 814 aa4.37□□□□□ -1.71
UFM1-201ENST00000239878 NLGN2Q8NFZ4 835 aa4.37□□□□□ -1.71
UFM1-201ENST00000239878 SLC39A13Q96H72 371 aa4.37□□□□□ -1.71
UFM1-201ENST00000239878 RTFDC1Q9BY42 306 aaPredicted RBP4.37□□□□□ -1.71
UFM1-201ENST00000239878 UBA5Q9GZZ9 404 aa4.37□□□□□ -1.71
UFM1-201ENST00000239878 TMX1Q9H3N1 280 aa4.37□□□□□ -1.71
UFM1-201ENST00000239878 ZNF652Q9Y2D9 606 aa4.37□□□□□ -1.71
UFM1-201ENST00000239878 MAP3K2Q9Y2U5 619 aa4.37□□□□□ -1.71
UFM1-201ENST00000239878 PCDHB15Q9Y5E8 787 aa4.37□□□□□ -1.71
UFM1-201ENST00000239878 RLBP1P12271 317 aa4.37□□□□□ -1.71
UFM1-201ENST00000239878 MYL6BP14649 208 aa4.37□□□□□ -1.71
UFM1-201ENST00000239878 RFX5P48382 616 aaPredicted RBP4.37□□□□□ -1.71
UFM1-201ENST00000239878 PRELPP51888 382 aa4.37□□□□□ -1.71
UFM1-201ENST00000239878 DNAAF4Q8WXU2 420 aa4.37□□□□□ -1.71
UFM1-201ENST00000239878 BORCS6Q96GS4 357 aa4.37□□□□□ -1.71
UFM1-201ENST00000239878 PPP1R9BQ96SB3 815 aa4.37□□□□□ -1.71
UFM1-201ENST00000239878 FEZ2Q9UHY8 353 aaPredicted RBP4.37□□□□□ -1.71
UFM1-201ENST00000239878 KAT6BQ8WYB5 2073 aa4.37□□□□□ -1.71
UFM1-201ENST00000239878 PI4KAP2A4QPH2 592 aa4.37□□□□□ -1.71
UFM1-201ENST00000239878 ZPR1O75312 459 aa4.37□□□□□ -1.71
UFM1-201ENST00000239878 BCAR3O75815 825 aa4.37□□□□□ -1.71
UFM1-201ENST00000239878 EIF3JO75822 258 aaKnown RBP4.37□□□□□ -1.71
UFM1-201ENST00000239878 ERFEQ4G0M1 354 aa4.37□□□□□ -1.71
UFM1-201ENST00000239878 DNAJC21Q5F1R6 531 aaKnown RBP4.37□□□□□ -1.71
UFM1-201ENST00000239878 MSL1Q68DK7 614 aa4.37□□□□□ -1.71
UFM1-201ENST00000239878 PI4KAP1Q8N8J0 262 aa4.37□□□□□ -1.71
UFM1-201ENST00000239878 PXYLP1Q8TE99 480 aa4.37□□□□□ -1.71
UFM1-201ENST00000239878 SYT17Q9BSW7 474 aa4.37□□□□□ -1.71
UFM1-201ENST00000239878 FHDC1Q9C0D6 1143 aaPredicted RBP4.37□□□□□ -1.71
UFM1-201ENST00000239878 NYXQ9GZU5 481 aa4.37□□□□□ -1.71
UFM1-201ENST00000239878 USP44Q9H0E7 712 aa4.37□□□□□ -1.71
UFM1-201ENST00000239878 IRF2BPLQ9H1B7 796 aa4.37□□□□□ -1.71
UFM1-201ENST00000239878 TNNQ9UQP3 1299 aa4.37□□□□□ -1.71
UFM1-201ENST00000239878 MAST2Q6P0Q8 1798 aa4.36□□□□□ -1.71
UFM1-201ENST00000239878 GOLIM4O00461 696 aa4.36□□□□□ -1.71
UFM1-201ENST00000239878 CREB3O43889 395 aa4.36□□□□□ -1.71
UFM1-201ENST00000239878 SLFN14P0C7P3 912 aa4.36□□□□□ -1.71
UFM1-201ENST00000239878 YBX3P16989 372 aaKnown RBP eCLIP4.36□□□□□ -1.716e-13■■■■■ 27.7
UFM1-201ENST00000239878 EIF2S2P20042 333 aaKnown RBP4.36□□□□□ -1.71
UFM1-201ENST00000239878 U2AF2P26368 475 aaKnown RBP eCLIP4.36□□□□□ -1.712e-7■■■□□ 18.9
UFM1-201ENST00000239878 NOP2P46087 812 aaKnown RBP4.36□□□□□ -1.71
UFM1-201ENST00000239878 ATF7IPQ6VMQ6 1270 aa4.36□□□□□ -1.71
UFM1-201ENST00000239878 C1orf216Q8TAB5 229 aa4.36□□□□□ -1.71
UFM1-201ENST00000239878 CRAMP1Q96RY5 1269 aa4.36□□□□□ -1.71
UFM1-201ENST00000239878 ZBTB3Q9H5J0 574 aa4.36□□□□□ -1.71
UFM1-201ENST00000239878 GABBR1Q9UBS5 961 aa4.36□□□□□ -1.71
UFM1-201ENST00000239878 DMGDHQ9UI17 866 aaKnown RBP4.36□□□□□ -1.71
UFM1-201ENST00000239878 NOB1Q9ULX3 412 aaKnown RBP4.36□□□□□ -1.71
UFM1-201ENST00000239878 CEP83Q9Y592 693 aa4.36□□□□□ -1.71
UFM1-201ENST00000239878 DOCK2Q92608 1830 aa4.36□□□□□ -1.71
UFM1-201ENST00000239878 GJA5P36382 358 aa4.36□□□□□ -1.71
UFM1-201ENST00000239878 FANCCQ00597 558 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms