RNA–Protein interactions for RNA: ENST00000229307.8

NANOG-201, Transcript of Nanog homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NANOG, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOG-201ENST00000229307 GREM2Q9H772 168 aa9.19□□□□□ -0.94
NANOG-201ENST00000229307 SMTNL1A8MU46 457 aa9.19□□□□□ -0.94
NANOG-201ENST00000229307 PDE8BO95263 885 aa9.19□□□□□ -0.94
NANOG-201ENST00000229307 RLBP1P12271 317 aa9.19□□□□□ -0.94
NANOG-201ENST00000229307 UBA7P41226 1012 aa9.19□□□□□ -0.94
NANOG-201ENST00000229307 PPP2R5BQ15173 497 aa9.19□□□□□ -0.94
NANOG-201ENST00000229307 KLHDC4Q8TBB5 520 aa9.19□□□□□ -0.94
NANOG-201ENST00000229307 COA1Q9GZY4 146 aa9.19□□□□□ -0.94
NANOG-201ENST00000229307 TSPY26PQ9H489 355 aa9.19□□□□□ -0.94
NANOG-201ENST00000229307 ZSCAN16Q9H4T2 348 aaPredicted RBP9.19□□□□□ -0.94
NANOG-201ENST00000229307 SLIT2O94813 1529 aa9.19□□□□□ -0.94
NANOG-201ENST00000229307 ADGRB1O14514 1584 aa9.19□□□□□ -0.94
NANOG-201ENST00000229307 KCNQ4P56696 695 aa9.18□□□□□ -0.94
NANOG-201ENST00000229307 EZH2Q15910 746 aaKnown RBP9.18□□□□□ -0.94
NANOG-201ENST00000229307 KANK3Q6NY19 840 aa9.18□□□□□ -0.94
NANOG-201ENST00000229307 DHX32Q7L7V1 743 aaKnown RBP9.18□□□□□ -0.94
NANOG-201ENST00000229307 APBB1IPQ7Z5R6 666 aaPredicted RBP9.18□□□□□ -0.94
NANOG-201ENST00000229307 TMED8Q6PL24 325 aaPredicted RBP9.18□□□□□ -0.94
NANOG-201ENST00000229307 KIAA0825Q8IV33 1275 aa9.18□□□□□ -0.94
NANOG-201ENST00000229307 COPRSQ9NQ92 184 aa9.18□□□□□ -0.94
NANOG-201ENST00000229307 GPAA1O43292 621 aa9.18□□□□□ -0.94
NANOG-201ENST00000229307 TBCAO75347 108 aaKnown RBP9.18□□□□□ -0.94
NANOG-201ENST00000229307 CYP19A1P11511 503 aaPredicted RBP9.18□□□□□ -0.94
NANOG-201ENST00000229307 PRKG1Q13976 671 aa9.18□□□□□ -0.94
NANOG-201ENST00000229307 SSH3Q8TE77 659 aa9.18□□□□□ -0.94
NANOG-201ENST00000229307 TGFBRAP1Q8WUH2 860 aa9.18□□□□□ -0.94
NANOG-201ENST00000229307 ARHGEF1Q92888 912 aaKnown RBP9.18□□□□□ -0.94
NANOG-201ENST00000229307 ALG1Q9BT22 464 aa9.18□□□□□ -0.94
NANOG-201ENST00000229307 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.18□□□□□ -0.94
NANOG-201ENST00000229307 TCP10Q12799 353 aa9.18□□□□□ -0.94
NANOG-201ENST00000229307 Q6ZUG5 572 aa9.18□□□□□ -0.94
NANOG-201ENST00000229307 CHURC1Q8WUH1 139 aa9.18□□□□□ -0.94
NANOG-201ENST00000229307 USP44Q9H0E7 712 aa9.18□□□□□ -0.94
NANOG-201ENST00000229307 NUP62CLQ9H1M0 184 aa9.18□□□□□ -0.94
NANOG-201ENST00000229307 CCP110O43303 1012 aa9.18□□□□□ -0.94
NANOG-201ENST00000229307 SERPINC1P01008 464 aa9.18□□□□□ -0.94
NANOG-201ENST00000229307 ZAP70P43403 619 aa9.18□□□□□ -0.94
NANOG-201ENST00000229307 CETN1Q12798 172 aa9.18□□□□□ -0.94
NANOG-201ENST00000229307 MAPKAPK5Q8IW41 473 aa9.18□□□□□ -0.94
NANOG-201ENST00000229307 BSDC1Q9NW68 430 aaPredicted RBP9.18□□□□□ -0.94
NANOG-201ENST00000229307 ZNF532Q9HCE3 1301 aa9.17□□□□□ -0.94
NANOG-201ENST00000229307 USP32Q8NFA0 1604 aa9.17□□□□□ -0.94
NANOG-201ENST00000229307 USP17L3A6NCW0 530 aa9.17□□□□□ -0.94
NANOG-201ENST00000229307 USP17L4A6NCW7 530 aa9.17□□□□□ -0.94
NANOG-201ENST00000229307 GYG1P46976 350 aa9.17□□□□□ -0.94
NANOG-201ENST00000229307 CCDC102BQ68D86 513 aa9.17□□□□□ -0.94
NANOG-201ENST00000229307 USP17L1Q7RTZ2 530 aa9.17□□□□□ -0.94
NANOG-201ENST00000229307 PPFIBP1Q86W92 1011 aa9.17□□□□□ -0.94
NANOG-201ENST00000229307 PLEKHM2Q8IWE5 1019 aa9.17□□□□□ -0.94
NANOG-201ENST00000229307 GPHNQ9NQX3 736 aaPredicted RBP9.17□□□□□ -0.94
NANOG-201ENST00000229307 CD163L1Q9NR16 1453 aa9.17□□□□□ -0.94
NANOG-201ENST00000229307 DKC1O60832 514 aaKnown RBP eCLIP9.17□□□□□ -0.94
NANOG-201ENST00000229307 BRPF1P55201 1214 aaPredicted RBP9.17□□□□□ -0.94
NANOG-201ENST00000229307 CREB3L3Q68CJ9 461 aa9.17□□□□□ -0.94
NANOG-201ENST00000229307 USP37Q86T82 979 aa9.17□□□□□ -0.94
NANOG-201ENST00000229307 COL14A1Q05707 1796 aaKnown RBP9.17□□□□□ -0.94
NANOG-201ENST00000229307 GJB2P29033 226 aa9.17□□□□□ -0.94
NANOG-201ENST00000229307 SLC1A4P43007 532 aa9.17□□□□□ -0.94
NANOG-201ENST00000229307 ZMYND15Q9H091 742 aa9.17□□□□□ -0.94
NANOG-201ENST00000229307 STK24Q9Y6E0 443 aa9.17□□□□□ -0.94
NANOG-201ENST00000229307 ONECUT3O60422 494 aaPredicted RBP9.17□□□□□ -0.94
NANOG-201ENST00000229307 ZNF853P0CG23 659 aa9.17□□□□□ -0.94
NANOG-201ENST00000229307 GUCY1B3Q02153 619 aa9.17□□□□□ -0.94
NANOG-201ENST00000229307 PROSER3Q2NL68 480 aa9.17□□□□□ -0.94
NANOG-201ENST00000229307 GOLGA6L1Q8N7Z2 621 aa9.17□□□□□ -0.94
NANOG-201ENST00000229307 BRIP1Q9BX63 1249 aa9.17□□□□□ -0.94
NANOG-201ENST00000229307 UBA5Q9GZZ9 404 aa9.17□□□□□ -0.94
NANOG-201ENST00000229307 PATL2C9JE40 543 aaKnown RBP9.16□□□□□ -0.94
NANOG-201ENST00000229307 CTAGE5O15320 804 aa9.16□□□□□ -0.94
NANOG-201ENST00000229307 CHMLP26374 656 aa9.16□□□□□ -0.94
NANOG-201ENST00000229307 BTDP43251 543 aa9.16□□□□□ -0.94
NANOG-201ENST00000229307 SUSD4Q5VX71 490 aa9.16□□□□□ -0.94
NANOG-201ENST00000229307 SPC25Q9HBM1 224 aa9.16□□□□□ -0.94
NANOG-201ENST00000229307 BCL9LQ86UU0 1499 aa9.16□□□□□ -0.94
NANOG-201ENST00000229307 IQCA1LA6NCM1 817 aa9.16□□□□□ -0.94
NANOG-201ENST00000229307 TCP10L2B9ZVM9 353 aa9.16□□□□□ -0.94
NANOG-201ENST00000229307 KCNQ2O43526 872 aa9.16□□□□□ -0.94
NANOG-201ENST00000229307 KRT2P35908 639 aa9.16□□□□□ -0.94
NANOG-201ENST00000229307 CAVIN1Q6NZI2 390 aaKnown RBP9.16□□□□□ -0.94
NANOG-201ENST00000229307 TRIM5Q9C035 493 aa9.16□□□□□ -0.94
NANOG-201ENST00000229307 SWAP70Q9UH65 585 aa9.16□□□□□ -0.94
NANOG-201ENST00000229307 PCP11498 1178 aaKnown RBP9.16□□□□□ -0.94
NANOG-201ENST00000229307 IREB2P48200 963 aaKnown RBP9.16□□□□□ -0.94
NANOG-201ENST00000229307 FERMT3Q86UX7 667 aa9.16□□□□□ -0.94
NANOG-201ENST00000229307 PNMA6EA0A0J9YXQ4 647 aa9.16□□□□□ -0.94
NANOG-201ENST00000229307 BCAMP50895 628 aa9.16□□□□□ -0.94
NANOG-201ENST00000229307 USP14P54578 494 aa9.16□□□□□ -0.94
NANOG-201ENST00000229307 MCTP2Q6DN12 878 aa9.16□□□□□ -0.94
NANOG-201ENST00000229307 GTPBP4Q9BZE4 634 aaKnown RBP9.16□□□□□ -0.94
NANOG-201ENST00000229307 TNNQ9UQP3 1299 aa9.16□□□□□ -0.94
NANOG-201ENST00000229307 SETD1AO15047 1707 aaKnown RBP9.15□□□□□ -0.94
NANOG-201ENST00000229307 PLSCR1O15162 318 aa9.15□□□□□ -0.94
NANOG-201ENST00000229307 OSBPP22059 807 aa9.15□□□□□ -0.94
NANOG-201ENST00000229307 CCNA1P78396 465 aa9.15□□□□□ -0.94
NANOG-201ENST00000229307 DRC1Q96MC2 740 aa9.15□□□□□ -0.94
NANOG-201ENST00000229307 CDHR2Q9BYE9 1310 aa9.15□□□□□ -0.94
NANOG-201ENST00000229307 C21orf2O43822 256 aa9.15□□□□□ -0.94
NANOG-201ENST00000229307 CCDC17Q96LX7 622 aa9.15□□□□□ -0.94
NANOG-201ENST00000229307 DEF6Q9H4E7 631 aa9.15□□□□□ -0.94
NANOG-201ENST00000229307 GPCPD1Q9NPB8 672 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms