RNA–Protein interactions for RNA: ENST00000222345.10

SIPA1L3-201, Transcript of signal induced proliferation associated 1 like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1L3, Length 7,987 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-201ENST00000222345 ACTR5Q9H9F9 607 aaPredicted RBP15.3■□□□□ 0.04
SIPA1L3-201ENST00000222345 PPANQ9NQ55 473 aaKnown RBP15.3■□□□□ 0.04
SIPA1L3-201ENST00000222345 KLF18A0A0U1RQI7 1052 aa15.3■□□□□ 0.04
SIPA1L3-201ENST00000222345 TAF7Q15545 349 aaPredicted RBP15.3■□□□□ 0.04
SIPA1L3-201ENST00000222345 EXOC4Q96A65 974 aa15.3■□□□□ 0.04
SIPA1L3-201ENST00000222345 ASXL1Q8IXJ9 1541 aa15.3■□□□□ 0.04
SIPA1L3-201ENST00000222345 IFIT5Q13325 482 aaKnown RBP15.3■□□□□ 0.04
SIPA1L3-201ENST00000222345 CCDC92Q53HC0 331 aaPredicted RBP15.3■□□□□ 0.04
SIPA1L3-201ENST00000222345 CLTAP09496 248 aa15.3■□□□□ 0.04
SIPA1L3-201ENST00000222345 MARCKSP29966 332 aaPredicted RBP15.3■□□□□ 0.04
SIPA1L3-201ENST00000222345 ESRRGP62508 458 aa15.3■□□□□ 0.04
SIPA1L3-201ENST00000222345 PPP2R5AQ15172 486 aa15.3■□□□□ 0.04
SIPA1L3-201ENST00000222345 Q6ZUG5 572 aa15.3■□□□□ 0.04
SIPA1L3-201ENST00000222345 RNASELQ05823 741 aaKnown RBP15.3■□□□□ 0.04
SIPA1L3-201ENST00000222345 KRT71Q3SY84 523 aa15.3■□□□□ 0.04
SIPA1L3-201ENST00000222345 LLPHQ9BRT6 129 aaKnown RBP15.3■□□□□ 0.04
SIPA1L3-201ENST00000222345 SAR1BQ9Y6B6 198 aa15.3■□□□□ 0.04
SIPA1L3-201ENST00000222345 RTL9Q8NET4 1388 aa15.29■□□□□ 0.04
SIPA1L3-201ENST00000222345 RTEL1-TNFRSF6BF6WH68 1400 aa15.29■□□□□ 0.04
SIPA1L3-201ENST00000222345 SKAP1Q86WV1 359 aa15.29■□□□□ 0.04
SIPA1L3-201ENST00000222345 CRCPO75575 148 aa15.29■□□□□ 0.04
SIPA1L3-201ENST00000222345 DIXDC1Q155Q3 683 aa15.29■□□□□ 0.04
SIPA1L3-201ENST00000222345 CFAP70Q5T0N1 1121 aa15.29■□□□□ 0.04
SIPA1L3-201ENST00000222345 NECAB1Q8N987 351 aa15.29■□□□□ 0.04
SIPA1L3-201ENST00000222345 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.29■□□□□ 0.04
SIPA1L3-201ENST00000222345 MAIP1Q8WWC4 291 aa15.29■□□□□ 0.04
SIPA1L3-201ENST00000222345 CCDC68Q9H2F9 335 aa15.29■□□□□ 0.04
SIPA1L3-201ENST00000222345 SCINQ9Y6U3 715 aa15.29■□□□□ 0.04
SIPA1L3-201ENST00000222345 SYNRGQ9UMZ2 1314 aa15.29■□□□□ 0.04
SIPA1L3-201ENST00000222345 ARAP1Q96P48 1450 aa15.29■□□□□ 0.04
SIPA1L3-201ENST00000222345 KRT2P35908 639 aa15.29■□□□□ 0.04
SIPA1L3-201ENST00000222345 MCTP2Q6DN12 878 aa15.29■□□□□ 0.04
SIPA1L3-201ENST00000222345 RABGGTAQ92696 567 aa15.29■□□□□ 0.04
SIPA1L3-201ENST00000222345 GAPVD1Q14C86 1478 aa15.29■□□□□ 0.04
SIPA1L3-201ENST00000222345 TTC41PQ6P2S7 1318 aa15.29■□□□□ 0.04
SIPA1L3-201ENST00000222345 FANCCQ00597 558 aa15.29■□□□□ 0.04
SIPA1L3-201ENST00000222345 SEPT2Q15019 361 aa15.29■□□□□ 0.04
SIPA1L3-201ENST00000222345 ICE2Q659A1 982 aa15.29■□□□□ 0.04
SIPA1L3-201ENST00000222345 KLHDC4Q8TBB5 520 aa15.29■□□□□ 0.04
SIPA1L3-201ENST00000222345 DHX58Q96C10 678 aa15.29■□□□□ 0.04
SIPA1L3-201ENST00000222345 SATB2Q9UPW6 733 aa15.29■□□□□ 0.04
SIPA1L3-201ENST00000222345 MLKLQ8NB16 471 aa15.28■□□□□ 0.04
SIPA1L3-201ENST00000222345 CCHCR1Q8TD31 782 aa15.28■□□□□ 0.04
SIPA1L3-201ENST00000222345 RBM8AQ9Y5S9 174 aaKnown RBP15.28■□□□□ 0.04
SIPA1L3-201ENST00000222345 CALM1P0DP23 149 aa15.28■□□□□ 0.04
SIPA1L3-201ENST00000222345 CALM2P0DP24 149 aa15.28■□□□□ 0.04
SIPA1L3-201ENST00000222345 CALM3P0DP25 149 aa15.28■□□□□ 0.04
SIPA1L3-201ENST00000222345 SUN1O94901 812 aa15.28■□□□□ 0.04
SIPA1L3-201ENST00000222345 PDE1AP54750 535 aa15.28■□□□□ 0.04
SIPA1L3-201ENST00000222345 MCMDC2Q4G0Z9 681 aa15.28■□□□□ 0.04
SIPA1L3-201ENST00000222345 TMOD2Q9NZR1 351 aa15.28■□□□□ 0.04
SIPA1L3-201ENST00000222345 GOLGA8QA0A0J9YX86 632 aa15.28■□□□□ 0.04
SIPA1L3-201ENST00000222345 GOLGA8OA6NCC3 632 aa15.28■□□□□ 0.04
SIPA1L3-201ENST00000222345 GOLGA8NF8WBI6 632 aa15.28■□□□□ 0.04
SIPA1L3-201ENST00000222345 MAGEA9P43362 315 aa15.28■□□□□ 0.04
SIPA1L3-201ENST00000222345 MAP3K7CLP57077 242 aa15.28■□□□□ 0.04
SIPA1L3-201ENST00000222345 TRIM58Q8NG06 486 aa15.28■□□□□ 0.04
SIPA1L3-201ENST00000222345 BRF1Q92994 677 aa15.28■□□□□ 0.04
SIPA1L3-201ENST00000222345 CCDC85AQ96PX6 553 aaPredicted RBP15.28■□□□□ 0.04
SIPA1L3-201ENST00000222345 STX2P32856 288 aa15.28■□□□□ 0.04
SIPA1L3-201ENST00000222345 PPP4R1Q8TF05 950 aa15.28■□□□□ 0.04
SIPA1L3-201ENST00000222345 TSC22D3Q99576 134 aa15.28■□□□□ 0.04
SIPA1L3-201ENST00000222345 NCAPGQ9BPX3 1015 aa15.28■□□□□ 0.04
SIPA1L3-201ENST00000222345 ZNF652Q9Y2D9 606 aa15.28■□□□□ 0.04
SIPA1L3-201ENST00000222345 DEUP1Q05D60 604 aa15.28■□□□□ 0.04
SIPA1L3-201ENST00000222345 DYNC1I2Q13409 638 aaKnown RBP15.28■□□□□ 0.04
SIPA1L3-201ENST00000222345 CBX8Q9HC52 389 aa15.28■□□□□ 0.04
SIPA1L3-201ENST00000222345 SLC9C1Q4G0N8 1177 aa15.27■□□□□ 0.04
SIPA1L3-201ENST00000222345 PPP1R21Q6ZMI0 780 aa15.27■□□□□ 0.04
SIPA1L3-201ENST00000222345 ZMYM3Q14202 1370 aa15.27■□□□□ 0.04
SIPA1L3-201ENST00000222345 STARD3NLO95772 234 aa15.27■□□□□ 0.04
SIPA1L3-201ENST00000222345 FBXO41Q8TF61 875 aa15.27■□□□□ 0.04
SIPA1L3-201ENST00000222345 HS2ST1Q7LGA3 356 aa15.27■□□□□ 0.04
SIPA1L3-201ENST00000222345 PSMD1Q99460 953 aa15.27■□□□□ 0.04
SIPA1L3-201ENST00000222345 ZBTB12Q9Y330 459 aaPredicted RBP15.27■□□□□ 0.04
SIPA1L3-201ENST00000222345 UAP1Q16222 522 aaPredicted RBP15.27■□□□□ 0.03
SIPA1L3-201ENST00000222345 CCDC8Q9H0W5 538 aaPredicted RBP15.27■□□□□ 0.03
SIPA1L3-201ENST00000222345 DDX41Q9UJV9 622 aaKnown RBP15.27■□□□□ 0.03
SIPA1L3-201ENST00000222345 CREB3O43889 395 aa15.27■□□□□ 0.03
SIPA1L3-201ENST00000222345 SKIP12755 728 aa15.27■□□□□ 0.03
SIPA1L3-201ENST00000222345 CTNNA1P35221 906 aaKnown RBP15.27■□□□□ 0.03
SIPA1L3-201ENST00000222345 SND1Q7KZF4 910 aaKnown RBP eCLIP15.27■□□□□ 0.03
SIPA1L3-201ENST00000222345 GEN1Q17RS7 908 aa15.27■□□□□ 0.03
SIPA1L3-201ENST00000222345 IFIT1BQ5T764 474 aaKnown RBP15.26■□□□□ 0.03
SIPA1L3-201ENST00000222345 CNNM4Q6P4Q7 775 aa15.26■□□□□ 0.03
SIPA1L3-201ENST00000222345 SPECC1L-ADORA2AF8WAN1 911 aa15.26■□□□□ 0.03
SIPA1L3-201ENST00000222345 CRACR2BQ8N4Y2 399 aaPredicted RBP15.26■□□□□ 0.03
SIPA1L3-201ENST00000222345 FLOT1O75955 427 aa15.26■□□□□ 0.03
SIPA1L3-201ENST00000222345 GIPC1O14908 333 aa15.26■□□□□ 0.03
SIPA1L3-201ENST00000222345 MCM7P33993 719 aa15.26■□□□□ 0.03
SIPA1L3-201ENST00000222345 NLRP12P59046 1061 aa15.26■□□□□ 0.03
SIPA1L3-201ENST00000222345 MORC4Q8TE76 937 aa15.26■□□□□ 0.03
SIPA1L3-201ENST00000222345 ESR2Q92731 530 aa15.26■□□□□ 0.03
SIPA1L3-201ENST00000222345 RILPQ96NA2 401 aa15.26■□□□□ 0.03
SIPA1L3-201ENST00000222345 AK2P54819 239 aa15.26■□□□□ 0.03
SIPA1L3-201ENST00000222345 CXorf38Q8TB03 319 aa15.26■□□□□ 0.03
SIPA1L3-201ENST00000222345 DBF4Q9UBU7 674 aaPredicted RBP15.26■□□□□ 0.03
SIPA1L3-201ENST00000222345 MMS22LQ6ZRQ5 1243 aa15.26■□□□□ 0.03
SIPA1L3-201ENST00000222345 SAAL1Q96ER3 474 aa15.26■□□□□ 0.03
SIPA1L3-201ENST00000222345 NOC4LQ9BVI4 516 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms