RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 KDM6AO15550 1401 aaPredicted RBP10.87□□□□□ -0.67
CCDC113-201ENST00000219299 SLC15A2Q16348 729 aa10.87□□□□□ -0.67
CCDC113-201ENST00000219299 DPY19L2Q6NUT2 758 aa10.87□□□□□ -0.67
CCDC113-201ENST00000219299 BRIP1Q9BX63 1249 aa10.87□□□□□ -0.67
CCDC113-201ENST00000219299 CDHR2Q9BYE9 1310 aa10.87□□□□□ -0.67
CCDC113-201ENST00000219299 CHRNA5P30532 468 aa10.87□□□□□ -0.67
CCDC113-201ENST00000219299 AK2P54819 239 aa10.87□□□□□ -0.67
CCDC113-201ENST00000219299 PRR5LQ6MZQ0 368 aa10.87□□□□□ -0.67
CCDC113-201ENST00000219299 PCMTD1Q96MG8 357 aaPredicted RBP10.87□□□□□ -0.67
CCDC113-201ENST00000219299 STAP2Q9UGK3 403 aa10.87□□□□□ -0.67
CCDC113-201ENST00000219299 CCDC194A0A1B0GVG4 234 aa10.86□□□□□ -0.67
CCDC113-201ENST00000219299 SLC27A2O14975 620 aa10.86□□□□□ -0.67
CCDC113-201ENST00000219299 PTF1AQ7RTS3 328 aa10.86□□□□□ -0.67
CCDC113-201ENST00000219299 CAMTA1Q9Y6Y1 1673 aa10.86□□□□□ -0.67
CCDC113-201ENST00000219299 CNTNAP4Q9C0A0 1308 aa10.86□□□□□ -0.67
CCDC113-201ENST00000219299 COL3A1P02461 1466 aaPredicted RBP10.86□□□□□ -0.67
CCDC113-201ENST00000219299 SSBP05455 408 aaKnown RBP eCLIP10.86□□□□□ -0.67
CCDC113-201ENST00000219299 CCDC178Q5BJE1 867 aa10.86□□□□□ -0.67
CCDC113-201ENST00000219299 TFIP11Q9UBB9 837 aaKnown RBP10.86□□□□□ -0.67
CCDC113-201ENST00000219299 PDIA4P13667 645 aaKnown RBP10.86□□□□□ -0.67
CCDC113-201ENST00000219299 CTDSPL2Q05D32 466 aa10.86□□□□□ -0.67
CCDC113-201ENST00000219299 PDE4CQ08493 712 aa10.86□□□□□ -0.67
CCDC113-201ENST00000219299 EAPPQ56P03 285 aaPredicted RBP10.86□□□□□ -0.67
CCDC113-201ENST00000219299 CC2D2BQ6DHV5 1058 aa10.86□□□□□ -0.67
CCDC113-201ENST00000219299 OLFM4Q6UX06 510 aa10.86□□□□□ -0.67
CCDC113-201ENST00000219299 KRT18P05783 430 aaKnown RBP10.86□□□□□ -0.67
CCDC113-201ENST00000219299 FOXO4P98177 505 aa10.86□□□□□ -0.67
CCDC113-201ENST00000219299 CCDC192P0DO97 292 aa10.85□□□□□ -0.67
CCDC113-201ENST00000219299 RASGRF1Q13972 1273 aa10.85□□□□□ -0.67
CCDC113-201ENST00000219299 ZHX3Q9H4I2 956 aa10.85□□□□□ -0.67
CCDC113-201ENST00000219299 SPON1Q9HCB6 807 aa10.85□□□□□ -0.67
CCDC113-201ENST00000219299 RUFY3Q7L099 469 aa10.85□□□□□ -0.67
CCDC113-201ENST00000219299 USP42Q9H9J4 1324 aaKnown RBP10.85□□□□□ -0.67
CCDC113-201ENST00000219299 A0A0G2JLW4 131 aa10.85□□□□□ -0.67
CCDC113-201ENST00000219299 STX6O43752 255 aa10.85□□□□□ -0.67
CCDC113-201ENST00000219299 GNAQP50148 359 aa10.85□□□□□ -0.67
CCDC113-201ENST00000219299 CUL5Q93034 780 aa10.85□□□□□ -0.67
CCDC113-201ENST00000219299 CERS3Q8IU89 383 aa10.84□□□□□ -0.67
CCDC113-201ENST00000219299 POLR1AO95602 1720 aaPredicted RBP10.84□□□□□ -0.67
CCDC113-201ENST00000219299 BTDP43251 543 aa10.84□□□□□ -0.67
CCDC113-201ENST00000219299 PTH1RQ03431 593 aa10.84□□□□□ -0.67
CCDC113-201ENST00000219299 DIXDC1Q155Q3 683 aa10.84□□□□□ -0.67
CCDC113-201ENST00000219299 ZYXQ15942 572 aaKnown RBP10.84□□□□□ -0.67
CCDC113-201ENST00000219299 ECM2O94769 699 aaPredicted RBP10.84□□□□□ -0.67
CCDC113-201ENST00000219299 HSPD1P10809 573 aaKnown RBP10.84□□□□□ -0.67
CCDC113-201ENST00000219299 PPP4R3BQ5MIZ7 849 aa10.84□□□□□ -0.67
CCDC113-201ENST00000219299 ALG1Q9BT22 464 aa10.84□□□□□ -0.67
CCDC113-201ENST00000219299 OSBPL3Q9H4L5 887 aa10.84□□□□□ -0.67
CCDC113-201ENST00000219299 SNX14Q9Y5W7 946 aa10.84□□□□□ -0.67
CCDC113-201ENST00000219299 COL23A1Q86Y22 540 aaPredicted RBP10.84□□□□□ -0.67
CCDC113-201ENST00000219299 RTKN2Q8IZC4 609 aa10.84□□□□□ -0.67
CCDC113-201ENST00000219299 SPC24Q8NBT2 197 aa10.84□□□□□ -0.67
CCDC113-201ENST00000219299 GDPD2Q9HCC8 539 aa10.84□□□□□ -0.67
CCDC113-201ENST00000219299 IFT172Q9UG01 1749 aa10.84□□□□□ -0.67
CCDC113-201ENST00000219299 TCP10L2B9ZVM9 353 aa10.83□□□□□ -0.68
CCDC113-201ENST00000219299 DTNBO60941 627 aa10.83□□□□□ -0.68
CCDC113-201ENST00000219299 TSPYL1Q9H0U9 437 aa10.83□□□□□ -0.68
CCDC113-201ENST00000219299 TAOK3Q9H2K8 898 aa10.83□□□□□ -0.68
CCDC113-201ENST00000219299 KIF1AQ12756 1690 aa10.83□□□□□ -0.68
CCDC113-201ENST00000219299 BCL9O00512 1426 aa10.83□□□□□ -0.68
CCDC113-201ENST00000219299 TNS2Q63HR2 1409 aa10.83□□□□□ -0.68
CCDC113-201ENST00000219299 CLRN2A0PK11 232 aa10.83□□□□□ -0.68
CCDC113-201ENST00000219299 SEMA3EO15041 775 aa10.83□□□□□ -0.68
CCDC113-201ENST00000219299 FGAP02671 866 aa10.83□□□□□ -0.68
CCDC113-201ENST00000219299 UBE3CQ15386 1083 aa10.83□□□□□ -0.68
CCDC113-201ENST00000219299 IFNL3Q8IZI9 196 aa10.83□□□□□ -0.68
CCDC113-201ENST00000219299 CCDC12Q8WUD4 166 aaPredicted RBP10.83□□□□□ -0.68
CCDC113-201ENST00000219299 KIF20BQ96Q89 1820 aa10.83□□□□□ -0.68
CCDC113-201ENST00000219299 HEATR3Q7Z4Q2 680 aa10.83□□□□□ -0.68
CCDC113-201ENST00000219299 PDILTQ8N807 584 aa10.83□□□□□ -0.68
CCDC113-201ENST00000219299 TFAP4Q01664 338 aa10.83□□□□□ -0.68
CCDC113-201ENST00000219299 TNIP1Q15025 636 aa10.83□□□□□ -0.68
CCDC113-201ENST00000219299 NTSR2O95665 410 aa10.82□□□□□ -0.68
CCDC113-201ENST00000219299 RABL6Q3YEC7 729 aaPredicted RBP10.82□□□□□ -0.68
CCDC113-201ENST00000219299 FAM47AQ5JRC9 791 aa10.82□□□□□ -0.68
CCDC113-201ENST00000219299 TRMT1LQ7Z2T5 733 aaKnown RBP10.82□□□□□ -0.68
CCDC113-201ENST00000219299 NRXN3Q9Y4C0 1643 aa10.82□□□□□ -0.68
CCDC113-201ENST00000219299 GYS1P13807 737 aa10.82□□□□□ -0.68
CCDC113-201ENST00000219299 MCAMP43121 646 aa10.82□□□□□ -0.68
CCDC113-201ENST00000219299 DSCC1Q9BVC3 393 aa10.82□□□□□ -0.68
CCDC113-201ENST00000219299 SMC2O95347 1197 aa10.82□□□□□ -0.68
CCDC113-201ENST00000219299 USP8P40818 1118 aa10.82□□□□□ -0.68
CCDC113-201ENST00000219299 AKNAD1Q5T1N1 836 aa10.82□□□□□ -0.68
CCDC113-201ENST00000219299 ANGEL1Q9UNK9 670 aaKnown RBP10.82□□□□□ -0.68
CCDC113-201ENST00000219299 ATP10DQ9P241 1426 aa10.82□□□□□ -0.68
CCDC113-201ENST00000219299 ADGRB2O60241 1585 aa10.82□□□□□ -0.68
CCDC113-201ENST00000219299 CHMP4BP1P59074 171 aa10.82□□□□□ -0.68
CCDC113-201ENST00000219299 DYNLL1P63167 89 aaKnown RBP10.82□□□□□ -0.68
CCDC113-201ENST00000219299 SF3B3Q15393 1217 aaKnown RBP10.82□□□□□ -0.68
CCDC113-201ENST00000219299 SLC4A9Q96Q91 983 aa10.82□□□□□ -0.68
CCDC113-201ENST00000219299 COA1Q9GZY4 146 aa10.82□□□□□ -0.68
CCDC113-201ENST00000219299 RPS6KB1P23443 525 aa10.81□□□□□ -0.68
CCDC113-201ENST00000219299 MYL10Q9BUA6 226 aa10.81□□□□□ -0.68
CCDC113-201ENST00000219299 SCAND2PQ9GZW5 306 aaPredicted RBP10.81□□□□□ -0.68
CCDC113-201ENST00000219299 PICK1Q9NRD5 415 aa10.81□□□□□ -0.68
CCDC113-201ENST00000219299 CD209Q9NNX6 404 aa10.81□□□□□ -0.68
CCDC113-201ENST00000219299 CEP131Q9UPN4 1083 aa10.81□□□□□ -0.68
CCDC113-201ENST00000219299 EIF3JO75822 258 aaKnown RBP10.81□□□□□ -0.68
CCDC113-201ENST00000219299 CALM1P0DP23 149 aa10.81□□□□□ -0.68
CCDC113-201ENST00000219299 CALM2P0DP24 149 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms