RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 FUT8Q9BYC5 575 aa23.04■■□□□ 1.28
PPP1R3F-201ENST00000055335 CWC15Q9P013 229 aaKnown RBP23.04■■□□□ 1.28
PPP1R3F-201ENST00000055335 JCADQ9P266 1359 aa23.04■■□□□ 1.28
PPP1R3F-201ENST00000055335 UTYO14607 1347 aa23.04■■□□□ 1.28
PPP1R3F-201ENST00000055335 N4BP1O75113 896 aaKnown RBP23.04■■□□□ 1.28
PPP1R3F-201ENST00000055335 KIF4BQ2VIQ3 1234 aa23.04■■□□□ 1.28
PPP1R3F-201ENST00000055335 SH3TC1Q8TE82 1336 aa23.03■■□□□ 1.28
PPP1R3F-201ENST00000055335 ZC3H6P61129 1189 aaKnown RBP23.03■■□□□ 1.28
PPP1R3F-201ENST00000055335 MAP3K9P80192 1104 aa23.03■■□□□ 1.28
PPP1R3F-201ENST00000055335 SLC39A14Q15043 492 aa23.03■■□□□ 1.28
PPP1R3F-201ENST00000055335 PI16Q6UXB8 463 aa23.03■■□□□ 1.28
PPP1R3F-201ENST00000055335 INTS13Q9NVM9 706 aa23.03■■□□□ 1.28
PPP1R3F-201ENST00000055335 NLRP2Q9NX02 1062 aa23.03■■□□□ 1.28
PPP1R3F-201ENST00000055335 MRFAP1Q9Y605 127 aa23.03■■□□□ 1.28
PPP1R3F-201ENST00000055335 CHMP4BP1P59074 171 aa23.03■■□□□ 1.28
PPP1R3F-201ENST00000055335 JAKMIP3Q5VZ66 844 aa23.03■■□□□ 1.28
PPP1R3F-201ENST00000055335 KCNH3Q9ULD8 1083 aa23.03■■□□□ 1.28
PPP1R3F-201ENST00000055335 COBLO75128 1261 aa23.02■■□□□ 1.28
PPP1R3F-201ENST00000055335 FAM193AP78312 1265 aa23.02■■□□□ 1.28
PPP1R3F-201ENST00000055335 DHX8Q14562 1220 aaKnown RBP23.02■■□□□ 1.28
PPP1R3F-201ENST00000055335 KRT40Q6A162 431 aa23.02■■□□□ 1.28
PPP1R3F-201ENST00000055335 METTL16Q86W50 562 aaKnown RBP23.02■■□□□ 1.28
PPP1R3F-201ENST00000055335 PUS3Q9BZE2 481 aaKnown RBP23.02■■□□□ 1.28
PPP1R3F-201ENST00000055335 MRPL44Q9H9J2 332 aaKnown RBP23.02■■□□□ 1.28
PPP1R3F-201ENST00000055335 SAMSN1Q9NSI8 373 aaKnown RBP23.02■■□□□ 1.28
PPP1R3F-201ENST00000055335 FMN2Q9NZ56 1722 aa23.02■■□□□ 1.28
PPP1R3F-201ENST00000055335 A0A1B0GUL7 405 aa23.02■■□□□ 1.28
PPP1R3F-201ENST00000055335 KCNJ6P48051 423 aa23.02■■□□□ 1.28
PPP1R3F-201ENST00000055335 JMYQ8N9B5 988 aa23.02■■□□□ 1.28
PPP1R3F-201ENST00000055335 ZNF213O14771 459 aa23.02■■□□□ 1.28
PPP1R3F-201ENST00000055335 TRDNQ13061 729 aa23.02■■□□□ 1.28
PPP1R3F-201ENST00000055335 TRIM29Q14134 588 aa23.01■■□□□ 1.27
PPP1R3F-201ENST00000055335 ZNF569Q5MCW4 686 aa23.01■■□□□ 1.27
PPP1R3F-201ENST00000055335 HPS5Q9UPZ3 1129 aa23.01■■□□□ 1.27
PPP1R3F-201ENST00000055335 NWD1Q149M9 1564 aa23.01■■□□□ 1.27
PPP1R3F-201ENST00000055335 TSPYL1Q9H0U9 437 aa23.01■■□□□ 1.27
PPP1R3F-201ENST00000055335 CRYBG1Q9Y4K1 1723 aa23.01■■□□□ 1.27
PPP1R3F-201ENST00000055335 AGXT2Q9BYV1 514 aa23.01■■□□□ 1.27
PPP1R3F-201ENST00000055335 METAP2P50579 478 aaKnown RBP eCLIP23■■□□□ 1.27
PPP1R3F-201ENST00000055335 FMR1Q06787 632 aaKnown RBP eCLIP23■■□□□ 1.27
PPP1R3F-201ENST00000055335 TTC39AQ5SRH9 613 aa23■■□□□ 1.27
PPP1R3F-201ENST00000055335 SPECC1LQ69YQ0 1117 aa23■■□□□ 1.27
PPP1R3F-201ENST00000055335 NCOA7Q8NI08 942 aa23■■□□□ 1.27
PPP1R3F-201ENST00000055335 TXLNAP40222 546 aa23■■□□□ 1.27
PPP1R3F-201ENST00000055335 CHMP4CQ96CF2 233 aa23■■□□□ 1.27
PPP1R3F-201ENST00000055335 TOMM22Q9NS69 142 aa23■■□□□ 1.27
PPP1R3F-201ENST00000055335 PXDNQ92626 1479 aa23■■□□□ 1.27
PPP1R3F-201ENST00000055335 TSPOAP1O95153 1857 aa23■■□□□ 1.27
PPP1R3F-201ENST00000055335 FOXR1Q6PIV2 292 aa22.99■■□□□ 1.27
PPP1R3F-201ENST00000055335 TC2NQ8N9U0 490 aa22.99■■□□□ 1.27
PPP1R3F-201ENST00000055335 RABGGTAQ92696 567 aa22.99■■□□□ 1.27
PPP1R3F-201ENST00000055335 POLR2DO15514 142 aaKnown RBP22.99■■□□□ 1.27
PPP1R3F-201ENST00000055335 BMP6P22004 513 aa22.99■■□□□ 1.27
PPP1R3F-201ENST00000055335 TMEM139Q8IV31 216 aa22.99■■□□□ 1.27
PPP1R3F-201ENST00000055335 ZBTB3Q9H5J0 574 aa22.99■■□□□ 1.27
PPP1R3F-201ENST00000055335 FAN1Q9Y2M0 1017 aa22.99■■□□□ 1.27
PPP1R3F-201ENST00000055335 RAPGEF4Q8WZA2 1011 aa22.98■■□□□ 1.27
PPP1R3F-201ENST00000055335 SENP2Q9HC62 589 aa22.98■■□□□ 1.27
PPP1R3F-201ENST00000055335 INCENPQ9NQS7 918 aa22.98■■□□□ 1.27
PPP1R3F-201ENST00000055335 RRP15Q9Y3B9 282 aaKnown RBP22.98■■□□□ 1.27
PPP1R3F-201ENST00000055335 LRRC37A3O60309 1634 aa22.98■■□□□ 1.27
PPP1R3F-201ENST00000055335 GCP02774 474 aa22.98■■□□□ 1.27
PPP1R3F-201ENST00000055335 ADORA1P30542 326 aa22.98■■□□□ 1.27
PPP1R3F-201ENST00000055335 GRIN1Q05586 938 aa22.98■■□□□ 1.27
PPP1R3F-201ENST00000055335 GDAP1L1Q96MZ0 367 aa22.98■■□□□ 1.27
PPP1R3F-201ENST00000055335 PUS7LQ9H0K6 701 aaKnown RBP22.98■■□□□ 1.27
PPP1R3F-201ENST00000055335 AXIN2Q9Y2T1 843 aa22.98■■□□□ 1.27
PPP1R3F-201ENST00000055335 PRR29P0C7W0 189 aa22.98■■□□□ 1.27
PPP1R3F-201ENST00000055335 C19orf44Q9H6X5 657 aa22.98■■□□□ 1.27
PPP1R3F-201ENST00000055335 TUBE1Q9UJT0 475 aa22.98■■□□□ 1.27
PPP1R3F-201ENST00000055335 CHD2O14647 1828 aaKnown RBP22.97■■□□□ 1.27
PPP1R3F-201ENST00000055335 CCDC175P0C221 793 aa22.97■■□□□ 1.27
PPP1R3F-201ENST00000055335 PPFIBP1Q86W92 1011 aa22.97■■□□□ 1.27
PPP1R3F-201ENST00000055335 NALCNQ8IZF0 1738 aa22.97■■□□□ 1.27
PPP1R3F-201ENST00000055335 TEX33O43247 280 aa22.97■■□□□ 1.27
PPP1R3F-201ENST00000055335 KIF5CO60282 957 aa22.97■■□□□ 1.27
PPP1R3F-201ENST00000055335 ANTXR2P58335 489 aa22.97■■□□□ 1.27
PPP1R3F-201ENST00000055335 HSP90B2PQ58FF3 399 aa22.97■■□□□ 1.27
PPP1R3F-201ENST00000055335 SLC26A6Q9BXS9 759 aa22.97■■□□□ 1.27
PPP1R3F-201ENST00000055335 STX10O60499 249 aa22.96■■□□□ 1.27
PPP1R3F-201ENST00000055335 ABCB6Q9NP58 842 aa22.96■■□□□ 1.27
PPP1R3F-201ENST00000055335 AFMP43652 599 aa22.96■■□□□ 1.27
PPP1R3F-201ENST00000055335 CPLX2Q6PUV4 134 aaKnown RBP22.96■■□□□ 1.27
PPP1R3F-201ENST00000055335 RSRC2Q7L4I2 434 aaKnown RBP22.96■■□□□ 1.27
PPP1R3F-201ENST00000055335 CMTR1Q8N1G2 835 aaKnown RBP22.96■■□□□ 1.27
PPP1R3F-201ENST00000055335 CEP126Q9P2H0 1117 aa22.96■■□□□ 1.27
PPP1R3F-201ENST00000055335 SERTAD1Q9UHV2 236 aa22.96■■□□□ 1.27
PPP1R3F-201ENST00000055335 GOLGA6L9A6NEM1 432 aa22.96■■□□□ 1.27
PPP1R3F-201ENST00000055335 CSB-PGBD3P0DP91 1061 aa22.96■■□□□ 1.27
PPP1R3F-201ENST00000055335 CASP1P29466 404 aa22.96■■□□□ 1.27
PPP1R3F-201ENST00000055335 ATG9AQ7Z3C6 839 aa22.96■■□□□ 1.27
PPP1R3F-201ENST00000055335 PNKPQ96T60 521 aa22.96■■□□□ 1.27
PPP1R3F-201ENST00000055335 ATP8B1O43520 1251 aa22.95■■□□□ 1.27
PPP1R3F-201ENST00000055335 TAF7LQ5H9L4 462 aa22.95■■□□□ 1.27
PPP1R3F-201ENST00000055335 GOLGA5Q8TBA6 731 aa22.95■■□□□ 1.27
PPP1R3F-201ENST00000055335 CDC5LQ99459 802 aaKnown RBP22.95■■□□□ 1.27
PPP1R3F-201ENST00000055335 HINFPQ9BQA5 517 aa22.95■■□□□ 1.27
PPP1R3F-201ENST00000055335 KCNJ14Q9UNX9 436 aa22.95■■□□□ 1.27
PPP1R3F-201ENST00000055335 NCAPD2Q15021 1401 aa22.95■■□□□ 1.26
PPP1R3F-201ENST00000055335 RGPD8O14715 1765 aaPredicted RBP22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms