RNA–Protein interactions for RNA: ENSMUST00000172711.1

Trim40-203, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim40, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-203ENSMUST00000172711 Spg7Q3ULF4 781 aa10.05□□□□□ -0.8
Trim40-203ENSMUST00000172711 Washc4Q3UMB9 1173 aa10.05□□□□□ -0.8
Trim40-203ENSMUST00000172711 Pram1Q6BCL1 675 aa10.05□□□□□ -0.8
Trim40-203ENSMUST00000172711 Dis3l2Q8CI75 870 aaKnown RBP10.05□□□□□ -0.8
Trim40-203ENSMUST00000172711 Plcd4Q8K3R3 807 aa10.05□□□□□ -0.8
Trim40-203ENSMUST00000172711 Plekha4Q8VC98 588 aa10.05□□□□□ -0.8
Trim40-203ENSMUST00000172711 RabggtaQ9JHK4 567 aa10.05□□□□□ -0.8
Trim40-203ENSMUST00000172711 Cd2apQ9JLQ0 637 aa10.05□□□□□ -0.8
Trim40-203ENSMUST00000172711 Flvcr1B2RXV4 560 aa10.04□□□□□ -0.8
Trim40-203ENSMUST00000172711 Cyp2b10P12791 500 aa10.04□□□□□ -0.8
Trim40-203ENSMUST00000172711 Sept1P42209 366 aa10.04□□□□□ -0.8
Trim40-203ENSMUST00000172711 Mmp20P57748 482 aa10.04□□□□□ -0.8
Trim40-203ENSMUST00000172711 Atp2b3Q0VF55 1220 aa10.04□□□□□ -0.8
Trim40-203ENSMUST00000172711 Mum1Q6DID5 682 aa10.04□□□□□ -0.8
Trim40-203ENSMUST00000172711 Mboat7Q8CHK3 473 aa10.04□□□□□ -0.8
Trim40-203ENSMUST00000172711 Anks4bQ8K3X6 423 aa10.04□□□□□ -0.8
Trim40-203ENSMUST00000172711 Atrnl1Q6A051 1378 aa10.04□□□□□ -0.8
Trim40-203ENSMUST00000172711 Myh14Q6URW6 2000 aa10.03□□□□□ -0.8
Trim40-203ENSMUST00000172711 A0A1W2P7S8 802 aa10.03□□□□□ -0.8
Trim40-203ENSMUST00000172711 Pdlim7Q3TJD7 457 aa10.03□□□□□ -0.8
Trim40-203ENSMUST00000172711 Lins1Q3U1D0 764 aa10.03□□□□□ -0.8
Trim40-203ENSMUST00000172711 Olfm4Q3UZZ4 505 aa10.03□□□□□ -0.8
Trim40-203ENSMUST00000172711 Cdc5lQ6A068 802 aaKnown RBP10.03□□□□□ -0.8
Trim40-203ENSMUST00000172711 Ero1bQ8R2E9 467 aa10.03□□□□□ -0.8
Trim40-203ENSMUST00000172711 Atxn7Q8R4I1 867 aa10.03□□□□□ -0.8
Trim40-203ENSMUST00000172711 Gbp7Q91Z40 638 aa10.03□□□□□ -0.8
Trim40-203ENSMUST00000172711 Ak7Q9D2H2 614 aa10.03□□□□□ -0.8
Trim40-203ENSMUST00000172711 Ubxn11Q9D572 484 aa10.03□□□□□ -0.8
Trim40-203ENSMUST00000172711 XdhQ00519 1335 aa10.03□□□□□ -0.8
Trim40-203ENSMUST00000172711 Hap1O35668 628 aa10.02□□□□□ -0.8
Trim40-203ENSMUST00000172711 Gba2Q69ZF3 918 aa10.02□□□□□ -0.8
Trim40-203ENSMUST00000172711 Tmem179Q8BHH9 233 aa10.02□□□□□ -0.8
Trim40-203ENSMUST00000172711 Syne4Q8CII8 388 aa10.02□□□□□ -0.8
Trim40-203ENSMUST00000172711 Vmn1r199Q8R280 367 aa10.02□□□□□ -0.8
Trim40-203ENSMUST00000172711 Ciao1Q99KN2 339 aa10.02□□□□□ -0.8
Trim40-203ENSMUST00000172711 Tmod2Q9JKK7 351 aa10.02□□□□□ -0.8
Trim40-203ENSMUST00000172711 Myh3P13541 1940 aa10.02□□□□□ -0.8
Trim40-203ENSMUST00000172711 Ncor1Q60974 2453 aa10.02□□□□□ -0.81
Trim40-203ENSMUST00000172711 Myh6Q02566 1938 aaKnown RBP10.02□□□□□ -0.81
Trim40-203ENSMUST00000172711 Timm10P62073 90 aa10.02□□□□□ -0.81
Trim40-203ENSMUST00000172711 Ppp1r21Q3TDD9 780 aa10.02□□□□□ -0.81
Trim40-203ENSMUST00000172711 Tbc1d2bQ3U0J8 965 aa10.02□□□□□ -0.81
Trim40-203ENSMUST00000172711 Znf579Q80VM4 562 aa10.02□□□□□ -0.81
Trim40-203ENSMUST00000172711 Spata21Q8BHW6 681 aa10.02□□□□□ -0.81
Trim40-203ENSMUST00000172711 Edc3Q8K2D3 508 aaKnown RBP10.02□□□□□ -0.81
Trim40-203ENSMUST00000172711 Itgbl1Q8VDV0 494 aa10.02□□□□□ -0.81
Trim40-203ENSMUST00000172711 Ndufv2Q9D6J6 248 aa10.02□□□□□ -0.81
Trim40-203ENSMUST00000172711 Fbxo3Q9DC63 480 aa10.02□□□□□ -0.81
Trim40-203ENSMUST00000172711 Kntc1Q8C3Y4 2207 aa10.01□□□□□ -0.81
Trim40-203ENSMUST00000172711 Zc3h4Q6ZPZ3 1304 aaKnown RBP10.01□□□□□ -0.81
Trim40-203ENSMUST00000172711 1700003F12RikA2AKE5 210 aa10.01□□□□□ -0.81
Trim40-203ENSMUST00000172711 Pagr1bF6V0H0 108 aa10.01□□□□□ -0.81
Trim40-203ENSMUST00000172711 Grem2O88273 168 aa10.01□□□□□ -0.81
Trim40-203ENSMUST00000172711 Tigd5Q499M4 642 aa10.01□□□□□ -0.81
Trim40-203ENSMUST00000172711 Dll1Q61483 722 aa10.01□□□□□ -0.81
Trim40-203ENSMUST00000172711 Phf20l1Q8CCJ9 1013 aa10.01□□□□□ -0.81
Trim40-203ENSMUST00000172711 Rnf208Q8K0W3 265 aa10.01□□□□□ -0.81
Trim40-203ENSMUST00000172711 C8aQ8K182 587 aa10.01□□□□□ -0.81
Trim40-203ENSMUST00000172711 Sgpl1Q8R0X7 568 aa10.01□□□□□ -0.81
Trim40-203ENSMUST00000172711 Usp33Q8R5K2 909 aa10.01□□□□□ -0.81
Trim40-203ENSMUST00000172711 Taf5lQ91WQ5 589 aa10.01□□□□□ -0.81
Trim40-203ENSMUST00000172711 Pagr1aQ99L02 253 aa10.01□□□□□ -0.81
Trim40-203ENSMUST00000172711 Pcgf6Q99NA9 353 aa10.01□□□□□ -0.81
Trim40-203ENSMUST00000172711 CsadQ9DBE0 493 aa10.01□□□□□ -0.81
Trim40-203ENSMUST00000172711 Nap1l5Q9JJF0 156 aa10.01□□□□□ -0.81
Trim40-203ENSMUST00000172711 Bub1bQ9Z1S0 1052 aa10.01□□□□□ -0.81
Trim40-203ENSMUST00000172711 Sbf1Q6ZPE2 1867 aa10.01□□□□□ -0.81
Trim40-203ENSMUST00000172711 Nphp3Q7TNH6 1325 aa10□□□□□ -0.81
Trim40-203ENSMUST00000172711 Gm15262A0A140LIQ5 728 aa10□□□□□ -0.81
Trim40-203ENSMUST00000172711 Gm8882E9Q7E4 283 aa10□□□□□ -0.81
Trim40-203ENSMUST00000172711 OgdhlE9Q7L0 1029 aa10□□□□□ -0.81
Trim40-203ENSMUST00000172711 Bace1P56818 501 aa10□□□□□ -0.81
Trim40-203ENSMUST00000172711 AsnsQ61024 561 aa10□□□□□ -0.81
Trim40-203ENSMUST00000172711 Kiaa0753Q6A000 959 aa10□□□□□ -0.81
Trim40-203ENSMUST00000172711 Tmem87bQ8BKU8 555 aa10□□□□□ -0.81
Trim40-203ENSMUST00000172711 PpatQ8CIH9 517 aa10□□□□□ -0.81
Trim40-203ENSMUST00000172711 Noc3lQ8VI84 807 aaKnown RBP10□□□□□ -0.81
Trim40-203ENSMUST00000172711 Hps4Q99KG7 671 aa10□□□□□ -0.81
Trim40-203ENSMUST00000172711 Plcg1Q62077 1302 aa9.99□□□□□ -0.81
Trim40-203ENSMUST00000172711 Plekhg2Q6KAU7 1340 aa9.99□□□□□ -0.81
Trim40-203ENSMUST00000172711 Rfpl4bJ3QPR6 266 aa9.99□□□□□ -0.81
Trim40-203ENSMUST00000172711 Fzd1O70421 642 aa9.99□□□□□ -0.81
Trim40-203ENSMUST00000172711 Fads2p1Q0VAX3 487 aa9.99□□□□□ -0.81
Trim40-203ENSMUST00000172711 SfswapQ3USH5 945 aaKnown RBP9.99□□□□□ -0.81
Trim40-203ENSMUST00000172711 Kif22Q3V300 660 aa9.99□□□□□ -0.81
Trim40-203ENSMUST00000172711 Slc4a10Q5DTL9 1118 aa9.99□□□□□ -0.81
Trim40-203ENSMUST00000172711 Tbc1d9bQ5SVR0 1263 aa9.99□□□□□ -0.81
Trim40-203ENSMUST00000172711 Cdcp1Q5U462 833 aa9.99□□□□□ -0.81
Trim40-203ENSMUST00000172711 Znf784Q8BI69 297 aa9.99□□□□□ -0.81
Trim40-203ENSMUST00000172711 Tceal9Q9DD24 104 aa9.99□□□□□ -0.81
Trim40-203ENSMUST00000172711 SrcapA0A087WQ44 3271 aa9.99□□□□□ -0.81
Trim40-203ENSMUST00000172711 Kmt2eQ3UG20 1868 aa9.98□□□□□ -0.81
Trim40-203ENSMUST00000172711 Izumo3A6PWV3 263 aa9.98□□□□□ -0.81
Trim40-203ENSMUST00000172711 Ube3cQ80U95 1083 aa9.98□□□□□ -0.81
Trim40-203ENSMUST00000172711 Ift57Q8BXG3 429 aa9.98□□□□□ -0.81
Trim40-203ENSMUST00000172711 4930504O13RikQ8C5Z9 145 aa9.98□□□□□ -0.81
Trim40-203ENSMUST00000172711 Zbtb9Q8CDC7 459 aa9.98□□□□□ -0.81
Trim40-203ENSMUST00000172711 Aldh1l1Q8R0Y6 902 aa9.98□□□□□ -0.81
Trim40-203ENSMUST00000172711 Rfc4Q99J62 364 aa9.98□□□□□ -0.81
Trim40-203ENSMUST00000172711 1700006A11RikB9EHI3 544 aa9.97□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms