RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Stx17Q9D0I4 301 aa10.37□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Rpl13P47963 211 aaKnown RBP10.37□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Pdrg1P59048 133 aa10.37□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Ndc80Q9D0F1 642 aaKnown RBP10.37□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Kif6E9PX57 802 aa10.37□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Tdo2P48776 406 aa10.37□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Krit1Q6S5J6 736 aa10.37□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Cct6aP80317 531 aaKnown RBP10.37□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Iqsec3Q3TES0 1195 aa10.37□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Myo1gQ5SUA5 1024 aa10.37□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Rab34Q64008 259 aa10.37□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Fam170aQ66LM6 333 aa10.37□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Igsf3Q6ZQA6 1194 aa10.37□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Tmem87bQ8BKU8 555 aa10.37□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Aldh1l1Q8R0Y6 902 aa10.37□□□□□ -0.75
Col6a5-201ENSMUST00000165165 NostrinQ6WKZ7 506 aa10.37□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Rtn1Q8K0T0 780 aa10.37□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Gm5934D3Z4U6 212 aa10.37□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Slc10a4Q3UEZ8 437 aa10.37□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Nlrp2Q4PLS0 1046 aaKnown RBP10.37□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Itih3Q61704 889 aa10.37□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Nsfl1cQ9CZ44 370 aaKnown RBP10.37□□□□□ -0.75
Col6a5-201ENSMUST00000165165 GnaqP21279 359 aa10.36□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Sh2b1Q91ZM2 756 aa10.36□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Sept3Q9Z1S5 350 aa10.36□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Ppp4r4Q8C0Y0 875 aa10.36□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Wbp11Q923D5 641 aaKnown RBP10.36□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Rhobtb1Q9DAK3 695 aa10.36□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Zranb2Q9R020 330 aaKnown RBP10.36□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Wdr46Q9Z0H1 622 aaKnown RBP10.36□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Rrp1P56183 494 aaKnown RBP10.36□□□□□ -0.75
Col6a5-201ENSMUST00000165165 PhbP67778 272 aaKnown RBP10.36□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Irf9Q61179 399 aa10.36□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Abcc4E9Q236 1325 aa10.36□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Cacna2d2Q6PHS9 1154 aa10.36□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Cabcoco1Q8CDT7 208 aa10.36□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Nkiras1Q8CEC5 192 aa10.36□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Thap12Q9CUX1 758 aa10.36□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Med10Q9CXU0 135 aa10.36□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Slc4a2P13808 1237 aaKnown RBP10.36□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Rnf40Q3U319 1001 aa10.36□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Tmtc1Q3UV71 942 aa10.36□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Gm5935Q497S0 212 aa10.36□□□□□ -0.75
Col6a5-201ENSMUST00000165165 TmpoQ61033 693 aaKnown RBP10.36□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Map3k2Q61083 619 aa10.36□□□□□ -0.75
Col6a5-201ENSMUST00000165165 SsbP32067 415 aaKnown RBP10.36□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Slc5a1Q8C3K6 665 aa10.36□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Sptlc2P97363 560 aaKnown RBP10.35□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Zranb1Q7M760 708 aa10.35□□□□□ -0.75
Col6a5-201ENSMUST00000165165 4930548H24RikQ9D496 437 aa10.35□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Scyl1Q9EQC5 806 aaKnown RBP10.35□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Acot9Q9R0X4 439 aaKnown RBP10.35□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Slc4a7Q8BTY2 1034 aa10.35□□□□□ -0.75
Col6a5-201ENSMUST00000165165 MycbpQ9EQS3 103 aa10.35□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Atp6v1aP50516 617 aaKnown RBP10.35□□□□□ -0.75
Col6a5-201ENSMUST00000165165 EsrrgP62509 458 aa10.35□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Cdr2P97817 455 aa10.35□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Slc51bQ80WK2 128 aa10.35□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Abcb4P21440 1276 aa10.35□□□□□ -0.75
Col6a5-201ENSMUST00000165165 PpardP35396 440 aa10.35□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Tex2Q6ZPJ0 1128 aaKnown RBP10.35□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Jmjd4Q8BFT6 427 aa10.35□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Hirip3Q8BLH7 601 aa10.35□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Znf76Q8BMU0 568 aa10.35□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Pak2Q8CIN4 524 aa10.35□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Pex19Q8VCI5 299 aa10.35□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Gucy1b3O54865 620 aa10.35□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Traf3ip3Q8C0G2 513 aa10.35□□□□□ -0.75
Col6a5-201ENSMUST00000165165 St5Q924W7 1134 aa10.35□□□□□ -0.75
Col6a5-201ENSMUST00000165165 NrkQ9R0G8 1455 aa10.35□□□□□ -0.75
Col6a5-201ENSMUST00000165165 CltaO08585 235 aa10.35□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Anks6Q6GQX6 883 aa10.35□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Retreg2Q6NS82 541 aa10.35□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Grpel1Q99LP6 217 aa10.35□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Slc4a4O88343 1079 aa10.34□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Trim35Q8C006 501 aa10.34□□□□□ -0.75
Col6a5-201ENSMUST00000165165 ParvgQ9ERD8 331 aa10.34□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Myom3A2ABU4 1439 aa10.34□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Tshz3Q8CGV9 1081 aa10.34□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Abhd8Q8R0P8 439 aa10.34□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Ifih1Q8R5F7 1025 aa10.34□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Frat1P70339 274 aa10.34□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Nlrp4cQ3TKR3 982 aa10.34□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Gnat3Q3V3I2 354 aa10.34□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Ccdc28aQ8CEI3 192 aa10.34□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Gys2Q8VCB3 704 aa10.34□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Soga1E1U8D0 1418 aa10.34□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Klhl14Q69ZK5 630 aa10.34□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Slc26a7Q8R2Z3 656 aa10.34□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Klhl20Q8VCK5 604 aa10.34□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Acot11Q8VHQ9 594 aa10.34□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Ube3bQ9ES34 1070 aa10.34□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Atp6v0a1Q9Z1G4 839 aaKnown RBP10.34□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Xbp1O35426 267 aa10.34□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Rad50P70388 1312 aa10.34□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Tnnc2P20801 160 aa10.34□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Ccdc110Q3V125 848 aa10.34□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Pomgnt1Q91X88 660 aa10.34□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Tab2Q99K90 693 aa10.34□□□□□ -0.75
Col6a5-201ENSMUST00000165165 Ribc1Q9D0B8 379 aa10.34□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 29.8 ms