RNA–Protein interactions for RNA: ENSMUST00000161455.7

Ctc1-211, Transcript of CST complex subunit CTC1, mousemouse

APPRIS ALT2 TSL 2 BASIC

Gene Ctc1, Length 3,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-211ENSMUST00000161455 Ppp4r3bQ922R5 820 aa11.83□□□□□ -0.52
Ctc1-211ENSMUST00000161455 NapbP28663 298 aa11.83□□□□□ -0.52
Ctc1-211ENSMUST00000161455 GmpsQ3THK7 693 aa11.83□□□□□ -0.52
Ctc1-211ENSMUST00000161455 IcoslgQ9JHJ8 322 aa11.83□□□□□ -0.52
Ctc1-211ENSMUST00000161455 AatfQ9JKX4 526 aaKnown RBP11.83□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Nphp3Q7TNH6 1325 aa11.82□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Ces1aE9PYP1 563 aa11.82□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Hoxa7P02830 229 aa11.82□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Mageb2A2AHM0 380 aa11.82□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Dcdc2bF7BCK0 340 aa11.82□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Dynll1P63168 89 aa11.82□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Fez2Q6TYB5 348 aa11.82□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Stn1Q8K2X3 378 aa11.82□□□□□ -0.52
Ctc1-211ENSMUST00000161455 HdlbpQ8VDJ3 1268 aaKnown RBP11.82□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Togaram1Q6A070 1776 aaKnown RBP11.82□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Phlpp2Q8BXA7 1320 aa11.82□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Dync1i1O88485 628 aa11.82□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Spty2d1Q68FG3 682 aa11.82□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Tmem67Q8BR76 992 aa11.82□□□□□ -0.52
Ctc1-211ENSMUST00000161455 RabggtaQ9JHK4 567 aa11.82□□□□□ -0.52
Ctc1-211ENSMUST00000161455 PtmaP26350 111 aa11.81□□□□□ -0.52
Ctc1-211ENSMUST00000161455 NyxP83503 476 aa11.81□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Stk11ipQ3TAA7 1072 aa11.81□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Tbc1d2bQ3U0J8 965 aa11.81□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Vil1Q62468 827 aa11.81□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Tshz3Q8CGV9 1081 aa11.81□□□□□ -0.52
Ctc1-211ENSMUST00000161455 PtmsQ9D0J8 101 aaKnown RBP11.81□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Heg1E9Q7X6 1337 aa11.81□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Arap2Q8BZ05 1703 aa11.81□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Ube3cQ80U95 1083 aa11.81□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Dmrtc1Q9D9R7 182 aa11.81□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Cavin1O54724 392 aa11.81□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Pdia3P27773 505 aaKnown RBP11.81□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Ttll12Q3UDE2 639 aa11.81□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Q3UJP5 209 aa11.81□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Nxf2Q4ZGD8 691 aa11.81□□□□□ -0.52
Ctc1-211ENSMUST00000161455 AsnsQ61024 561 aa11.81□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Sipa1l3G3X9J0 1776 aa11.81□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Ppfia1B2RXQ2 1266 aa11.8□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Ssr1Q9CY50 286 aaKnown RBP11.8□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Cdca7Q9D0M2 382 aa11.8□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Appbp2Q9DAX9 585 aa11.8□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Znfx1Q8R151 1909 aaKnown RBP11.8□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Lcmt1A0A0U1RNF2 332 aa11.8□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Sept12Q9D451 317 aa11.8□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Gm45140A0A0N4SUM8 220 aa11.8□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Krt24A1L317 512 aa11.8□□□□□ -0.52
Ctc1-211ENSMUST00000161455 GabreA2AMW3 916 aa11.8□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Rfx1P48377 963 aa11.8□□□□□ -0.52
Ctc1-211ENSMUST00000161455 AaasP58742 546 aa11.8□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Pcsk7Q61139 770 aa11.8□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Dnajc2P54103 621 aaKnown RBP11.79□□□□□ -0.52
Ctc1-211ENSMUST00000161455 CrkQ64010 304 aa11.79□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Phf20l1Q8CCJ9 1013 aa11.79□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Xrcc4Q924T3 326 aa11.79□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Pold4Q9CWP8 107 aa11.79□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Col20a1Q923P0 1320 aa11.79□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Gm3893E9Q1I1 302 aa11.79□□□□□ -0.52
Ctc1-211ENSMUST00000161455 GscQ02591 256 aa11.79□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Map3k9Q3U1V8 1077 aa11.79□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Trim56Q80VI1 734 aaKnown RBP11.79□□□□□ -0.52
Ctc1-211ENSMUST00000161455 WdpcpQ8C456 722 aa11.79□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Tbc1d4Q8BYJ6 1307 aa11.79□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Cnot7Q60809 285 aa11.78□□□□□ -0.52
Ctc1-211ENSMUST00000161455 E4f1Q8CCE9 783 aa11.78□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Nup133Q8R0G9 1155 aa11.78□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Plekhg2Q6KAU7 1340 aa11.78□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Gpatch11Q3UFS4 262 aa11.78□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Rnf20Q5DTM8 973 aa11.78□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Insm1Q63ZV0 521 aa11.78□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Sass6Q80UK7 654 aa11.78□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Trappc12Q8K2L8 797 aa11.78□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Phactr2B1AVP0 632 aa11.77□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Cap1P40124 474 aa11.77□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Thrap3Q569Z6 951 aaKnown RBP11.77□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Kcnq3Q8K3F6 873 aa11.77□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Irx4Q9QY61 515 aa11.77□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Npc1l1Q6T3U4 1333 aa11.77□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Hap1O35668 628 aa11.77□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Ncf1Q09014 390 aa11.77□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Nme8Q715T0 586 aa11.77□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Map10Q8BJS7 891 aa11.77□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Adam1bQ8R534 806 aa11.77□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Sept14Q9DA97 430 aa11.77□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Rcan3Q9JKK0 239 aa11.77□□□□□ -0.52
Ctc1-211ENSMUST00000161455 Clrn2B2RVW2 232 aa11.77□□□□□ -0.53
Ctc1-211ENSMUST00000161455 Tbc1d31Q6NXY1 996 aa11.77□□□□□ -0.53
Ctc1-211ENSMUST00000161455 CenppQ9CZ92 286 aa11.77□□□□□ -0.53
Ctc1-211ENSMUST00000161455 Ccdc34Q3UI66 367 aa11.77□□□□□ -0.53
Ctc1-211ENSMUST00000161455 Krt40Q6IFX3 439 aa11.77□□□□□ -0.53
Ctc1-211ENSMUST00000161455 Dennd3A2RT67 1274 aa11.76□□□□□ -0.53
Ctc1-211ENSMUST00000161455 Grem2O88273 168 aa11.76□□□□□ -0.53
Ctc1-211ENSMUST00000161455 Nell2Q61220 819 aa11.76□□□□□ -0.53
Ctc1-211ENSMUST00000161455 Ppip5k2Q6ZQB6 1129 aa11.76□□□□□ -0.53
Ctc1-211ENSMUST00000161455 LdhdQ7TNG8 484 aa11.76□□□□□ -0.53
Ctc1-211ENSMUST00000161455 Ttc12Q8BW49 704 aa11.76□□□□□ -0.53
Ctc1-211ENSMUST00000161455 Lrrfip2Q91WK0 415 aa11.76□□□□□ -0.53
Ctc1-211ENSMUST00000161455 Rbm43Q99J64 343 aa11.76□□□□□ -0.53
Ctc1-211ENSMUST00000161455 Aox4Q3TYQ9 1336 aa11.76□□□□□ -0.53
Ctc1-211ENSMUST00000161455 Psmd1Q3TXS7 953 aa11.76□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms