RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Ppp1r42Q8R1Z4 357 aa20.39■□□□□ 0.85
Trim71-201ENSMUST00000111816 Tbc1d9Q3UYK3 1264 aa20.39■□□□□ 0.85
Trim71-201ENSMUST00000111816 Cylc2B1AWN8 422 aa20.39■□□□□ 0.85
Trim71-201ENSMUST00000111816 Calml3Q9D6P8 149 aa20.39■□□□□ 0.85
Trim71-201ENSMUST00000111816 Krt4P07744 525 aa20.39■□□□□ 0.85
Trim71-201ENSMUST00000111816 Phlpp2Q8BXA7 1320 aa20.39■□□□□ 0.85
Trim71-201ENSMUST00000111816 Gbp4A4UUI3 631 aa20.39■□□□□ 0.85
Trim71-201ENSMUST00000111816 Pfdn1Q9CWM4 122 aa20.39■□□□□ 0.85
Trim71-201ENSMUST00000111816 Stx8O88983 236 aa20.38■□□□□ 0.85
Trim71-201ENSMUST00000111816 EappQ5BU09 281 aa20.38■□□□□ 0.85
Trim71-201ENSMUST00000111816 Efcab14Q8BGQ6 484 aa20.38■□□□□ 0.85
Trim71-201ENSMUST00000111816 Smc5Q8CG46 1101 aaKnown RBP20.38■□□□□ 0.85
Trim71-201ENSMUST00000111816 Krt71Q9R0H5 524 aa20.38■□□□□ 0.85
Trim71-201ENSMUST00000111816 Izumo3A6PWV3 263 aa20.38■□□□□ 0.85
Trim71-201ENSMUST00000111816 Hyou1Q9JKR6 999 aaKnown RBP20.38■□□□□ 0.85
Trim71-201ENSMUST00000111816 Cep104Q80V31 926 aa20.38■□□□□ 0.85
Trim71-201ENSMUST00000111816 Kif2cQ922S8 721 aa20.38■□□□□ 0.85
Trim71-201ENSMUST00000111816 P2rx5Q3UYI1 455 aa20.38■□□□□ 0.85
Trim71-201ENSMUST00000111816 Tbc1d5Q80XQ2 815 aa20.38■□□□□ 0.85
Trim71-201ENSMUST00000111816 Shroom4Q1W617 1475 aa20.37■□□□□ 0.85
Trim71-201ENSMUST00000111816 Setd1bQ8CFT2 1985 aa20.37■□□□□ 0.85
Trim71-201ENSMUST00000111816 Znf830Q8R1N0 363 aaKnown RBP20.37■□□□□ 0.85
Trim71-201ENSMUST00000111816 Cgref1Q8R1U2 281 aa20.37■□□□□ 0.85
Trim71-201ENSMUST00000111816 Trim60Q8VI40 466 aa20.37■□□□□ 0.85
Trim71-201ENSMUST00000111816 Jade1Q6ZPI0 834 aaKnown RBP20.37■□□□□ 0.85
Trim71-201ENSMUST00000111816 Stk10O55098 966 aa20.37■□□□□ 0.85
Trim71-201ENSMUST00000111816 Elf2Q9JHC9 593 aa20.37■□□□□ 0.85
Trim71-201ENSMUST00000111816 Gstt4Q9D4P7 240 aa20.37■□□□□ 0.85
Trim71-201ENSMUST00000111816 Trim42Q9D2H5 723 aa20.37■□□□□ 0.85
Trim71-201ENSMUST00000111816 FibpQ9JI19 357 aa20.36■□□□□ 0.85
Trim71-201ENSMUST00000111816 CntrlA2AL36 2334 aa20.36■□□□□ 0.85
Trim71-201ENSMUST00000111816 ArsiQ32KI9 573 aa20.36■□□□□ 0.85
Trim71-201ENSMUST00000111816 LlphQ9D945 130 aaKnown RBP20.36■□□□□ 0.85
Trim71-201ENSMUST00000111816 Gm21985Q6P6P5 1106 aa20.36■□□□□ 0.85
Trim71-201ENSMUST00000111816 Ubac1Q8VDI7 409 aa20.36■□□□□ 0.85
Trim71-201ENSMUST00000111816 Catsper1Q91ZR5 686 aa20.36■□□□□ 0.85
Trim71-201ENSMUST00000111816 Wdr44Q6NVE8 915 aa20.36■□□□□ 0.85
Trim71-201ENSMUST00000111816 Cnot10Q8BH15 744 aa20.36■□□□□ 0.85
Trim71-201ENSMUST00000111816 Rsad2Q8CBB9 362 aa20.36■□□□□ 0.85
Trim71-201ENSMUST00000111816 Arhgap4B1AUY3 965 aa20.35■□□□□ 0.85
Trim71-201ENSMUST00000111816 Maml3D4QGC2 1135 aa20.35■□□□□ 0.85
Trim71-201ENSMUST00000111816 Map3k7Q62073 579 aa20.35■□□□□ 0.85
Trim71-201ENSMUST00000111816 Krit1Q6S5J6 736 aa20.35■□□□□ 0.85
Trim71-201ENSMUST00000111816 Tmtc4Q8BG19 741 aa20.35■□□□□ 0.85
Trim71-201ENSMUST00000111816 Bzw2Q91VK1 419 aaKnown RBP20.35■□□□□ 0.85
Trim71-201ENSMUST00000111816 Pds5bQ4VA53 1446 aaKnown RBP20.35■□□□□ 0.85
Trim71-201ENSMUST00000111816 Prkar2bP31324 416 aa20.35■□□□□ 0.85
Trim71-201ENSMUST00000111816 Ttc21bQ0HA38 1315 aa20.35■□□□□ 0.85
Trim71-201ENSMUST00000111816 Camsap2Q8C1B1 1461 aa20.35■□□□□ 0.85
Trim71-201ENSMUST00000111816 Sdccag3A2AIW0 432 aa20.35■□□□□ 0.85
Trim71-201ENSMUST00000111816 Atp6v0a1Q9Z1G4 839 aaKnown RBP20.35■□□□□ 0.85
Trim71-201ENSMUST00000111816 KdrP35918 1367 aa20.35■□□□□ 0.85
Trim71-201ENSMUST00000111816 LrpprcQ6PB66 1392 aaKnown RBP20.35■□□□□ 0.85
Trim71-201ENSMUST00000111816 Pde1bQ01065 535 aa20.35■□□□□ 0.85
Trim71-201ENSMUST00000111816 Timm44O35857 452 aa20.35■□□□□ 0.85
Trim71-201ENSMUST00000111816 Ice2Q3UZ18 988 aaKnown RBP20.35■□□□□ 0.85
Trim71-201ENSMUST00000111816 Nfkbil1O88995 381 aa20.35■□□□□ 0.85
Trim71-201ENSMUST00000111816 Anp32cQ64G17 123 aa20.35■□□□□ 0.85
Trim71-201ENSMUST00000111816 Gtf3c6Q9D8P7 227 aa20.35■□□□□ 0.85
Trim71-201ENSMUST00000111816 Wdr3Q8BHB4 942 aaKnown RBP20.35■□□□□ 0.85
Trim71-201ENSMUST00000111816 Zranb2Q9R020 330 aaKnown RBP20.35■□□□□ 0.85
Trim71-201ENSMUST00000111816 Casp8O89110 480 aa20.34■□□□□ 0.85
Trim71-201ENSMUST00000111816 Serpinb13Q8CDC0 389 aa20.34■□□□□ 0.85
Trim71-201ENSMUST00000111816 Klhl20Q8VCK5 604 aa20.34■□□□□ 0.85
Trim71-201ENSMUST00000111816 Cttnbp2nlQ99LJ0 638 aa20.34■□□□□ 0.85
Trim71-201ENSMUST00000111816 Cnnm4Q69ZF7 771 aa20.34■□□□□ 0.85
Trim71-201ENSMUST00000111816 Fgd5Q80UZ0 1219 aa20.34■□□□□ 0.85
Trim71-201ENSMUST00000111816 Gm5936A2BG95 728 aa20.34■□□□□ 0.85
Trim71-201ENSMUST00000111816 Dennd3A2RT67 1274 aa20.34■□□□□ 0.85
Trim71-201ENSMUST00000111816 Gm5640A3KG49 728 aa20.34■□□□□ 0.85
Trim71-201ENSMUST00000111816 Hcls1P49710 486 aaKnown RBP20.34■□□□□ 0.85
Trim71-201ENSMUST00000111816 Gins4Q99LZ3 223 aa20.34■□□□□ 0.85
Trim71-201ENSMUST00000111816 Ccdc65Q8VHI7 493 aa20.34■□□□□ 0.85
Trim71-201ENSMUST00000111816 Dph6Q9CQ28 267 aa20.34■□□□□ 0.85
Trim71-201ENSMUST00000111816 Gna11P21278 359 aa20.34■□□□□ 0.85
Trim71-201ENSMUST00000111816 MarcksP26645 309 aaKnown RBP20.34■□□□□ 0.85
Trim71-201ENSMUST00000111816 Cplx3Q8R1B5 158 aa20.34■□□□□ 0.85
Trim71-201ENSMUST00000111816 Asxl1P59598 1514 aa20.34■□□□□ 0.85
Trim71-201ENSMUST00000111816 Csrnp2Q8BGQ2 534 aa20.34■□□□□ 0.85
Trim71-201ENSMUST00000111816 Frat1P70339 274 aa20.33■□□□□ 0.85
Trim71-201ENSMUST00000111816 Sptlc2P97363 560 aaKnown RBP20.33■□□□□ 0.85
Trim71-201ENSMUST00000111816 C1qbpO35658 278 aa20.33■□□□□ 0.85
Trim71-201ENSMUST00000111816 Arhgef2Q60875 985 aa20.33■□□□□ 0.85
Trim71-201ENSMUST00000111816 Sos2Q02384 1333 aa20.33■□□□□ 0.85
Trim71-201ENSMUST00000111816 U2af1l4Q8BGJ9 220 aa20.33■□□□□ 0.85
Trim71-201ENSMUST00000111816 SsbP32067 415 aaKnown RBP20.33■□□□□ 0.85
Trim71-201ENSMUST00000111816 Gm5934D3Z4U6 212 aa20.33■□□□□ 0.84
Trim71-201ENSMUST00000111816 Dcaf17Q3TUL7 519 aa20.33■□□□□ 0.84
Trim71-201ENSMUST00000111816 Ggnbp2Q5SV77 696 aa20.33■□□□□ 0.84
Trim71-201ENSMUST00000111816 Cul9Q80TT8 1865 aa20.33■□□□□ 0.84
Trim71-201ENSMUST00000111816 Calm1P0DP26 149 aaKnown RBP20.33■□□□□ 0.84
Trim71-201ENSMUST00000111816 Calm2P0DP27 149 aaKnown RBP20.33■□□□□ 0.84
Trim71-201ENSMUST00000111816 Calm3P0DP28 149 aaKnown RBP20.33■□□□□ 0.84
Trim71-201ENSMUST00000111816 Copg1Q9QZE5 874 aa20.33■□□□□ 0.84
Trim71-201ENSMUST00000111816 Lmnb2P21619 596 aaKnown RBP20.32■□□□□ 0.84
Trim71-201ENSMUST00000111816 Ndc80Q9D0F1 642 aaKnown RBP20.32■□□□□ 0.84
Trim71-201ENSMUST00000111816 Cabp5Q9JLK3 173 aa20.32■□□□□ 0.84
Trim71-201ENSMUST00000111816 Pfdn6Q03958 127 aa20.32■□□□□ 0.84
Trim71-201ENSMUST00000111816 Tubgcp3P58854 905 aa20.32■□□□□ 0.84
Trim71-201ENSMUST00000111816 Slc51bQ80WK2 128 aa20.32■□□□□ 0.84
Retrieved 100 of 22,080 RNA–protein pairs in 16.8 ms